RNA–Protein interactions for RNA: ENST00000622454.4

EPB42-210, Transcript of erythrocyte membrane protein band 4.2, humanhuman

TSL 1 (best) BASIC

Gene EPB42, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB42-210ENST00000622454 PDE1AP54750 535 aa17.26■□□□□ 0.35
EPB42-210ENST00000622454 CASC1Q6TDU7 716 aa17.26■□□□□ 0.35
EPB42-210ENST00000622454 SSH3Q8TE77 659 aa17.26■□□□□ 0.35
EPB42-210ENST00000622454 ANTXR1Q9H6X2 564 aa17.26■□□□□ 0.35
EPB42-210ENST00000622454 ABCA3Q99758 1704 aa17.26■□□□□ 0.35
EPB42-210ENST00000622454 PRAMEF22A3QJZ6 481 aa17.25■□□□□ 0.35
EPB42-210ENST00000622454 HSCBQ8IWL3 235 aa17.25■□□□□ 0.35
EPB42-210ENST00000622454 DCAF5Q96JK2 942 aa17.25■□□□□ 0.35
EPB42-210ENST00000622454 NBPF7P0C2Y1 421 aaPredicted RBP17.25■□□□□ 0.35
EPB42-210ENST00000622454 KSR2Q6VAB6 950 aa17.25■□□□□ 0.35
EPB42-210ENST00000622454 NFATC2IPQ8NCF5 419 aa17.25■□□□□ 0.35
EPB42-210ENST00000622454 C5P01031 1676 aa17.25■□□□□ 0.35
EPB42-210ENST00000622454 TUBGCP6Q96RT7 1819 aa17.25■□□□□ 0.35
EPB42-210ENST00000622454 MRC1P22897 1456 aa17.24■□□□□ 0.35
EPB42-210ENST00000622454 DEKP35659 375 aaKnown RBP17.24■□□□□ 0.35
EPB42-210ENST00000622454 PROSER3Q2NL68 480 aa17.24■□□□□ 0.35
EPB42-210ENST00000622454 SNX21Q969T3 373 aa17.24■□□□□ 0.35
EPB42-210ENST00000622454 DDX21Q9NR30 783 aaKnown RBP eCLIP17.24■□□□□ 0.35
EPB42-210ENST00000622454 SALL3Q9BXA9 1300 aa17.24■□□□□ 0.35
EPB42-210ENST00000622454 HSP90AB1P08238 724 aaKnown RBP17.24■□□□□ 0.35
EPB42-210ENST00000622454 PPP1R42Q7Z4L9 355 aa17.24■□□□□ 0.35
EPB42-210ENST00000622454 MAP3K2Q9Y2U5 619 aa17.24■□□□□ 0.35
EPB42-210ENST00000622454 PARP4Q9UKK3 1724 aaKnown RBP17.23■□□□□ 0.35
EPB42-210ENST00000622454 CYP27B1O15528 508 aa17.23■□□□□ 0.35
EPB42-210ENST00000622454 ALDH1L1O75891 902 aa17.23■□□□□ 0.35
EPB42-210ENST00000622454 SLC39A6Q13433 755 aa17.23■□□□□ 0.35
EPB42-210ENST00000622454 POLA2Q14181 598 aa17.23■□□□□ 0.35
EPB42-210ENST00000622454 KIF2CQ99661 725 aa17.23■□□□□ 0.35
EPB42-210ENST00000622454 ROBO1Q9Y6N7 1651 aa17.23■□□□□ 0.35
EPB42-210ENST00000622454 DDX58O95786 925 aaKnown RBP17.22■□□□□ 0.35
EPB42-210ENST00000622454 MX1P20591 662 aa17.22■□□□□ 0.35
EPB42-210ENST00000622454 LTBP4Q8N2S1 1624 aa17.22■□□□□ 0.35
EPB42-210ENST00000622454 WDR17Q8IZU2 1322 aa17.22■□□□□ 0.35
EPB42-210ENST00000622454 SRGAP3O43295 1099 aa17.21■□□□□ 0.35
EPB42-210ENST00000622454 RAB11FIP3O75154 756 aa17.21■□□□□ 0.35
EPB42-210ENST00000622454 TOM1L2Q6ZVM7 507 aa17.21■□□□□ 0.35
EPB42-210ENST00000622454 FRAT2O75474 233 aaPredicted RBP17.21■□□□□ 0.35
EPB42-210ENST00000622454 HDAC5Q9UQL6 1122 aa17.21■□□□□ 0.35
EPB42-210ENST00000622454 COL5A2P05997 1499 aaPredicted RBP17.2■□□□□ 0.34
EPB42-210ENST00000622454 PDIA6Q15084 440 aa17.2■□□□□ 0.34
EPB42-210ENST00000622454 SURF6O75683 361 aaKnown RBP17.2■□□□□ 0.34
EPB42-210ENST00000622454 TTC5Q8N0Z6 440 aa17.2■□□□□ 0.34
EPB42-210ENST00000622454 C9orf78Q9NZ63 289 aaPredicted RBP17.2■□□□□ 0.34
EPB42-210ENST00000622454 STAP2Q9UGK3 403 aa17.2■□□□□ 0.34
EPB42-210ENST00000622454 LINS1Q8NG48 757 aa17.19■□□□□ 0.34
EPB42-210ENST00000622454 ZNF496Q96IT1 587 aaPredicted RBP17.19■□□□□ 0.34
EPB42-210ENST00000622454 USP26Q9BXU7 913 aa17.19■□□□□ 0.34
EPB42-210ENST00000622454 STRN4Q9NRL3 753 aa17.19■□□□□ 0.34
EPB42-210ENST00000622454 MTX1Q13505 466 aa17.19■□□□□ 0.34
EPB42-210ENST00000622454 SPRYD3Q8NCJ5 442 aa17.19■□□□□ 0.34
EPB42-210ENST00000622454 REC8O95072 547 aa17.18■□□□□ 0.34
EPB42-210ENST00000622454 HSP90AB4PQ58FF6 505 aa17.18■□□□□ 0.34
EPB42-210ENST00000622454 AOX1Q06278 1338 aa17.18■□□□□ 0.34
EPB42-210ENST00000622454 SNRPA1P09661 255 aaKnown RBP17.17■□□□□ 0.34
EPB42-210ENST00000622454 CABP4P57796 275 aa17.17■□□□□ 0.34
EPB42-210ENST00000622454 EVA1CP58658 441 aa17.17■□□□□ 0.34
EPB42-210ENST00000622454 AIMP1Q12904 312 aaKnown RBP17.17■□□□□ 0.34
EPB42-210ENST00000622454 CWF19L2Q2TBE0 894 aaKnown RBP17.17■□□□□ 0.34
EPB42-210ENST00000622454 RHPN1Q8TCX5 695 aa17.17■□□□□ 0.34
EPB42-210ENST00000622454 KIF1BPQ96EK5 621 aa17.17■□□□□ 0.34
EPB42-210ENST00000622454 FMNL2Q96PY5 1086 aa17.17■□□□□ 0.34
EPB42-210ENST00000622454 PCDH11XQ9BZA7 1347 aa17.17■□□□□ 0.34
EPB42-210ENST00000622454 PCDH11YQ9BZA8 1340 aa17.17■□□□□ 0.34
EPB42-210ENST00000622454 ERC2O15083 957 aa17.16■□□□□ 0.34
EPB42-210ENST00000622454 TSHZ3Q63HK5 1081 aa17.16■□□□□ 0.34
EPB42-210ENST00000622454 IL1RAPL2Q9NP60 686 aa17.16■□□□□ 0.34
EPB42-210ENST00000622454 AK9Q5TCS8 1911 aa17.16■□□□□ 0.34
EPB42-210ENST00000622454 ZCRB1Q8TBF4 217 aaKnown RBP17.16■□□□□ 0.34
EPB42-210ENST00000622454 CHMP5Q9NZZ3 219 aa17.16■□□□□ 0.34
EPB42-210ENST00000622454 AHDC1Q5TGY3 1603 aaPredicted RBP17.15■□□□□ 0.34
EPB42-210ENST00000622454 LAMB4A4D0S4 1761 aa17.15■□□□□ 0.34
EPB42-210ENST00000622454 MYL6BP14649 208 aa17.15■□□□□ 0.34
EPB42-210ENST00000622454 LARP1Q6PKG0 1096 aaKnown RBP17.15■□□□□ 0.34
EPB42-210ENST00000622454 RIC3Q7Z5B4 369 aa17.15■□□□□ 0.34
EPB42-210ENST00000622454 UTYO14607 1347 aa17.15■□□□□ 0.34
EPB42-210ENST00000622454 GRM8O00222 908 aa17.15■□□□□ 0.34
EPB42-210ENST00000622454 NEXNQ0ZGT2 675 aa17.14■□□□□ 0.33
EPB42-210ENST00000622454 RABEP1Q15276 862 aa17.14■□□□□ 0.33
EPB42-210ENST00000622454 RBM42Q9BTD8 480 aaKnown RBP17.14■□□□□ 0.33
EPB42-210ENST00000622454 CARD10Q9BWT7 1032 aa17.14■□□□□ 0.33
EPB42-210ENST00000622454 USP16Q9Y5T5 823 aa17.14■□□□□ 0.33
EPB42-210ENST00000622454 TRIM6-TRIM34B2RNG4 842 aa17.13■□□□□ 0.33
EPB42-210ENST00000622454 K7ELQ4 463 aaPredicted RBP17.13■□□□□ 0.33
EPB42-210ENST00000622454 COPS6Q7L5N1 327 aa17.13■□□□□ 0.33
EPB42-210ENST00000622454 XAGE3Q8WTP9 111 aa17.13■□□□□ 0.33
EPB42-210ENST00000622454 CD2BP2O95400 341 aaKnown RBP17.12■□□□□ 0.33
EPB42-210ENST00000622454 IL2RBP14784 551 aa17.12■□□□□ 0.33
EPB42-210ENST00000622454 NUTM1Q86Y26 1132 aa17.12■□□□□ 0.33
EPB42-210ENST00000622454 RILPL2Q969X0 211 aa17.12■□□□□ 0.33
EPB42-210ENST00000622454 BTG4Q9NY30 223 aa17.12■□□□□ 0.33
EPB42-210ENST00000622454 GLI3P10071 1580 aa17.12■□□□□ 0.33
EPB42-210ENST00000622454 IGKV5-2P06315 115 aa17.12■□□□□ 0.33
EPB42-210ENST00000622454 UBR2Q8IWV8 1755 aa17.12■□□□□ 0.33
EPB42-210ENST00000622454 SHANK3Q9BYB0 1731 aa17.11■□□□□ 0.33
EPB42-210ENST00000622454 ERVV-2B6SEH9 535 aa17.11■□□□□ 0.33
EPB42-210ENST00000622454 OS9Q13438 667 aaPredicted RBP17.11■□□□□ 0.33
EPB42-210ENST00000622454 ANKRD13DQ6ZTN6 518 aa17.11■□□□□ 0.33
EPB42-210ENST00000622454 LRP10Q7Z4F1 713 aa17.11■□□□□ 0.33
EPB42-210ENST00000622454 METTL22Q9BUU2 404 aaPredicted RBP17.11■□□□□ 0.33
EPB42-210ENST00000622454 DDIT3P35638 169 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms