RNA–Protein interactions for RNA: ENST00000622259.4

SNX12-206, Transcript of sorting nexin 12, humanhuman

TSL 5 BASIC

Gene SNX12, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-206ENST00000622259 DPY19L2Q6NUT2 758 aa20.45■□□□□ 0.86
SNX12-206ENST00000622259 CCDC85CA6NKD9 419 aa20.44■□□□□ 0.86
SNX12-206ENST00000622259 TTLL6Q8N841 843 aa20.44■□□□□ 0.86
SNX12-206ENST00000622259 PTCD1O75127 700 aaKnown RBP20.43■□□□□ 0.86
SNX12-206ENST00000622259 USPL1Q5W0Q7 1092 aa20.43■□□□□ 0.86
SNX12-206ENST00000622259 KIF20BQ96Q89 1820 aa20.43■□□□□ 0.86
SNX12-206ENST00000622259 ERVV-2B6SEH9 535 aa20.42■□□□□ 0.86
SNX12-206ENST00000622259 PPM1GO15355 546 aaPredicted RBP20.42■□□□□ 0.86
SNX12-206ENST00000622259 DDNO94850 711 aaPredicted RBP20.42■□□□□ 0.86
SNX12-206ENST00000622259 NRXN2Q9P2S2 1712 aa20.41■□□□□ 0.86
SNX12-206ENST00000622259 DICER1Q9UPY3 1922 aaKnown RBP20.41■□□□□ 0.86
SNX12-206ENST00000622259 NFIXQ14938 502 aa20.41■□□□□ 0.86
SNX12-206ENST00000622259 ERFEQ4G0M1 354 aa20.41■□□□□ 0.86
SNX12-206ENST00000622259 INTS5Q6P9B9 1019 aaKnown RBP20.41■□□□□ 0.86
SNX12-206ENST00000622259 CARMIL3Q8ND23 1372 aa20.41■□□□□ 0.86
SNX12-206ENST00000622259 TJP1Q07157 1748 aa20.41■□□□□ 0.86
SNX12-206ENST00000622259 ST20-MTHFSA0A0A6YYL1 179 aa20.4■□□□□ 0.86
SNX12-206ENST00000622259 TMEM88BA6NKF7 163 aa20.39■□□□□ 0.85
SNX12-206ENST00000622259 C2CD5Q86YS7 1000 aa20.39■□□□□ 0.85
SNX12-206ENST00000622259 WASHC2AQ641Q2 1341 aa20.38■□□□□ 0.85
SNX12-206ENST00000622259 ITGBL1O95965 494 aaPredicted RBP20.38■□□□□ 0.85
SNX12-206ENST00000622259 ZNF219Q9P2Y4 722 aaPredicted RBP20.38■□□□□ 0.85
SNX12-206ENST00000622259 ANKRD26Q9UPS8 1709 aa20.38■□□□□ 0.85
SNX12-206ENST00000622259 FER1L6Q2WGJ9 1857 aa20.37■□□□□ 0.85
SNX12-206ENST00000622259 TNRC18O15417 2968 aaPredicted RBP20.37■□□□□ 0.85
SNX12-206ENST00000622259 ZPR1O75312 459 aa20.36■□□□□ 0.85
SNX12-206ENST00000622259 SERPINB2P05120 415 aa20.36■□□□□ 0.85
SNX12-206ENST00000622259 CABP4P57796 275 aa20.36■□□□□ 0.85
SNX12-206ENST00000622259 LDHDQ86WU2 507 aa20.36■□□□□ 0.85
SNX12-206ENST00000622259 BCL2L12Q9HB09 334 aa20.36■□□□□ 0.85
SNX12-206ENST00000622259 C21orf2O43822 256 aa20.35■□□□□ 0.85
SNX12-206ENST00000622259 RASSF10A6NK89 507 aa20.34■□□□□ 0.85
SNX12-206ENST00000622259 TAF1DQ9H5J8 278 aaPredicted RBP20.34■□□□□ 0.85
SNX12-206ENST00000622259 SOS1Q07889 1333 aaPredicted RBP20.33■□□□□ 0.85
SNX12-206ENST00000622259 H0YIN7 160 aa20.33■□□□□ 0.85
SNX12-206ENST00000622259 WDR33Q9C0J8 1336 aaKnown RBP20.32■□□□□ 0.84
SNX12-206ENST00000622259 HSP90AB1P08238 724 aaKnown RBP20.32■□□□□ 0.84
SNX12-206ENST00000622259 EIF4A2Q14240 407 aaKnown RBP20.32■□□□□ 0.84
SNX12-206ENST00000622259 DEFB115Q30KQ5 88 aa20.32■□□□□ 0.84
SNX12-206ENST00000622259 CARD14Q9BXL6 1004 aa20.32■□□□□ 0.84
SNX12-206ENST00000622259 PDE4DIPQ5VU43 2346 aa20.31■□□□□ 0.84
SNX12-206ENST00000622259 ANKRD31Q8N7Z5 1873 aa20.31■□□□□ 0.84
SNX12-206ENST00000622259 MAP2K1Q02750 393 aaPredicted RBP20.31■□□□□ 0.84
SNX12-206ENST00000622259 DNAJC10Q8IXB1 793 aa20.31■□□□□ 0.84
SNX12-206ENST00000622259 NFATC2IPQ8NCF5 419 aa20.31■□□□□ 0.84
SNX12-206ENST00000622259 ZNF622Q969S3 477 aaKnown RBP eCLIP20.31■□□□□ 0.84
SNX12-206ENST00000622259 NARFQ9UHQ1 456 aa20.3■□□□□ 0.84
SNX12-206ENST00000622259 COL11A2P13942 1736 aaPredicted RBP20.3■□□□□ 0.84
SNX12-206ENST00000622259 SCN4AP35499 1836 aa20.3■□□□□ 0.84
SNX12-206ENST00000622259 EAPPQ56P03 285 aaPredicted RBP20.29■□□□□ 0.84
SNX12-206ENST00000622259 ZNF530Q6P9A1 599 aaPredicted RBP20.29■□□□□ 0.84
SNX12-206ENST00000622259 L3MBTL3Q96JM7 780 aaPredicted RBP20.29■□□□□ 0.84
SNX12-206ENST00000622259 TAOK3Q9H2K8 898 aa20.29■□□□□ 0.84
SNX12-206ENST00000622259 POLKQ9UBT6 870 aa20.29■□□□□ 0.84
SNX12-206ENST00000622259 ADAMTSL1Q8N6G6 1762 aa20.29■□□□□ 0.84
SNX12-206ENST00000622259 LTBP3Q9NS15 1303 aa20.28■□□□□ 0.84
SNX12-206ENST00000622259 IQCA1LA6NCM1 817 aa20.28■□□□□ 0.84
SNX12-206ENST00000622259 CCDC24Q8N4L8 307 aa20.28■□□□□ 0.84
SNX12-206ENST00000622259 COL15A1P39059 1388 aa20.27■□□□□ 0.84
SNX12-206ENST00000622259 CFAP44Q96MT7 982 aa20.27■□□□□ 0.84
SNX12-206ENST00000622259 TSKSQ9UJT2 592 aa20.27■□□□□ 0.84
SNX12-206ENST00000622259 MTHFSP49914 203 aa20.26■□□□□ 0.83
SNX12-206ENST00000622259 PLEKHO1Q53GL0 409 aaPredicted RBP20.26■□□□□ 0.83
SNX12-206ENST00000622259 BICDL1Q6ZP65 573 aa20.26■□□□□ 0.83
SNX12-206ENST00000622259 ZBTB1Q9Y2K1 713 aa20.26■□□□□ 0.83
SNX12-206ENST00000622259 SLX4Q8IY92 1834 aa20.25■□□□□ 0.83
SNX12-206ENST00000622259 THSD7BQ9C0I4 1608 aa20.25■□□□□ 0.83
SNX12-206ENST00000622259 CYP19A1P11511 503 aaPredicted RBP20.25■□□□□ 0.83
SNX12-206ENST00000622259 MAP1SQ66K74 1059 aaPredicted RBP20.25■□□□□ 0.83
SNX12-206ENST00000622259 CLEC11AQ9Y240 323 aa20.25■□□□□ 0.83
SNX12-206ENST00000622259 CNTROBQ8N137 903 aa20.24■□□□□ 0.83
SNX12-206ENST00000622259 ABT1Q9ULW3 272 aaKnown RBP20.24■□□□□ 0.83
SNX12-206ENST00000622259 ZNF541Q9H0D2 1346 aa20.24■□□□□ 0.83
SNX12-206ENST00000622259 MCOLN1Q9GZU1 580 aa20.23■□□□□ 0.83
SNX12-206ENST00000622259 CACNA1SQ13698 1873 aa20.22■□□□□ 0.83
SNX12-206ENST00000622259 FMR1Q06787 632 aaKnown RBP eCLIP20.22■□□□□ 0.83
SNX12-206ENST00000622259 SLC24A1O60721 1099 aa20.21■□□□□ 0.83
SNX12-206ENST00000622259 EPHX2P34913 555 aa20.21■□□□□ 0.83
SNX12-206ENST00000622259 BRIP1Q9BX63 1249 aa20.21■□□□□ 0.83
SNX12-206ENST00000622259 TBC1D9BQ66K14 1250 aa20.2■□□□□ 0.82
SNX12-206ENST00000622259 PRR5LQ6MZQ0 368 aa20.2■□□□□ 0.82
SNX12-206ENST00000622259 CYP4F22Q6NT55 531 aa20.2■□□□□ 0.82
SNX12-206ENST00000622259 CAPNS2Q96L46 248 aa20.2■□□□□ 0.82
SNX12-206ENST00000622259 HACL1Q9UJ83 578 aa20.2■□□□□ 0.82
SNX12-206ENST00000622259 LTBP1Q14766 1721 aa20.19■□□□□ 0.82
SNX12-206ENST00000622259 PDE6BP35913 854 aa20.19■□□□□ 0.82
SNX12-206ENST00000622259 GRM1Q13255 1194 aa20.19■□□□□ 0.82
SNX12-206ENST00000622259 SLC39A6Q13433 755 aa20.19■□□□□ 0.82
SNX12-206ENST00000622259 AMOTQ4VCS5 1084 aa20.19■□□□□ 0.82
SNX12-206ENST00000622259 AEBP1Q8IUX7 1158 aa20.19■□□□□ 0.82
SNX12-206ENST00000622259 RNF123Q5XPI4 1314 aa20.19■□□□□ 0.82
SNX12-206ENST00000622259 CASP8AP2Q9UKL3 1982 aa20.19■□□□□ 0.82
SNX12-206ENST00000622259 C1orf141Q5JVX7 400 aa20.18■□□□□ 0.82
SNX12-206ENST00000622259 PRPF40BQ6NWY9 871 aaKnown RBP20.18■□□□□ 0.82
SNX12-206ENST00000622259 GPR101Q96P66 508 aaPredicted RBP20.18■□□□□ 0.82
SNX12-206ENST00000622259 DDX21Q9NR30 783 aaKnown RBP eCLIP20.18■□□□□ 0.82
SNX12-206ENST00000622259 SCN11AQ9UI33 1791 aa20.17■□□□□ 0.82
SNX12-206ENST00000622259 TNNT2P45379 298 aaPredicted RBP20.17■□□□□ 0.82
SNX12-206ENST00000622259 PAXIP1Q6ZW49 1069 aaPredicted RBP20.17■□□□□ 0.82
SNX12-206ENST00000622259 BEGAINQ9BUH8 593 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms