RNA–Protein interactions for RNA: ENST00000622062.1

WHAMMP3-204, Transcript of WAS protein homolog associated with actin, golgi membranes and microtubules pseudogene 3, humanhuman

TSL 1 (best)

Gene WHAMMP3, Length 2,944 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
WHAMMP3-204ENST00000622062 SIL1Q9H173 461 aa10.37□□□□□ -0.75
WHAMMP3-204ENST00000622062 CCDC9Q9Y3X0 531 aaKnown RBP10.37□□□□□ -0.75
WHAMMP3-204ENST00000622062 CACNB1Q02641 598 aaPredicted RBP10.36□□□□□ -0.75
WHAMMP3-204ENST00000622062 TNPO1Q92973 898 aaKnown RBP10.36□□□□□ -0.75
WHAMMP3-204ENST00000622062 LARP6Q9BRS8 491 aaKnown RBP10.36□□□□□ -0.75
WHAMMP3-204ENST00000622062 VIRMAQ69YN4 1812 aaKnown RBP10.36□□□□□ -0.75
WHAMMP3-204ENST00000622062 CHAMP1Q96JM3 812 aa10.36□□□□□ -0.75
WHAMMP3-204ENST00000622062 ZNF142P52746 1687 aaPredicted RBP10.36□□□□□ -0.75
WHAMMP3-204ENST00000622062 NEK4P51957 841 aa10.35□□□□□ -0.75
WHAMMP3-204ENST00000622062 UPF3BQ9BZI7 483 aaKnown RBP10.35□□□□□ -0.75
WHAMMP3-204ENST00000622062 ZNF330Q9Y3S2 320 aaPredicted RBP10.35□□□□□ -0.75
WHAMMP3-204ENST00000622062 ADGRL3Q9HAR2 1447 aa10.35□□□□□ -0.75
WHAMMP3-204ENST00000622062 TRAK2O60296 914 aa10.35□□□□□ -0.75
WHAMMP3-204ENST00000622062 SSFA2P28290 1259 aa10.35□□□□□ -0.75
WHAMMP3-204ENST00000622062 PKP1Q13835 747 aa10.35□□□□□ -0.75
WHAMMP3-204ENST00000622062 KLHDC4Q8TBB5 520 aa10.35□□□□□ -0.75
WHAMMP3-204ENST00000622062 KAT6BQ8WYB5 2073 aa10.35□□□□□ -0.75
WHAMMP3-204ENST00000622062 ERC2O15083 957 aa10.34□□□□□ -0.75
WHAMMP3-204ENST00000622062 GIGYF1O75420 1035 aaPredicted RBP10.34□□□□□ -0.75
WHAMMP3-204ENST00000622062 DBF4Q9UBU7 674 aaPredicted RBP10.34□□□□□ -0.75
WHAMMP3-204ENST00000622062 SOS1Q07889 1333 aaPredicted RBP10.34□□□□□ -0.75
WHAMMP3-204ENST00000622062 NCLP19338 710 aaKnown RBP10.34□□□□□ -0.75
WHAMMP3-204ENST00000622062 AMOTQ4VCS5 1084 aa10.34□□□□□ -0.75
WHAMMP3-204ENST00000622062 RIC3Q7Z5B4 369 aa10.34□□□□□ -0.75
WHAMMP3-204ENST00000622062 ZGPATQ8N5A5 531 aaKnown RBP10.34□□□□□ -0.75
WHAMMP3-204ENST00000622062 TMEM94Q12767 1356 aa10.34□□□□□ -0.75
WHAMMP3-204ENST00000622062 REC8O95072 547 aa10.34□□□□□ -0.75
WHAMMP3-204ENST00000622062 BEND3Q5T5X7 828 aa10.34□□□□□ -0.75
WHAMMP3-204ENST00000622062 DDX54Q8TDD1 881 aaKnown RBP10.34□□□□□ -0.75
WHAMMP3-204ENST00000622062 NALCNQ8IZF0 1738 aa10.33□□□□□ -0.76
WHAMMP3-204ENST00000622062 KIF24Q5T7B8 1368 aa10.33□□□□□ -0.76
WHAMMP3-204ENST00000622062 ERBB3P21860 1342 aa10.33□□□□□ -0.76
WHAMMP3-204ENST00000622062 IL25Q9H293 177 aa10.33□□□□□ -0.76
WHAMMP3-204ENST00000622062 STRN4Q9NRL3 753 aa10.33□□□□□ -0.76
WHAMMP3-204ENST00000622062 RGPD1P0DJD0 1748 aa10.33□□□□□ -0.76
WHAMMP3-204ENST00000622062 XRN1Q8IZH2 1706 aaKnown RBP10.33□□□□□ -0.76
WHAMMP3-204ENST00000622062 CWC27Q6UX04 472 aaKnown RBP10.33□□□□□ -0.76
WHAMMP3-204ENST00000622062 RHPN1Q8TCX5 695 aa10.33□□□□□ -0.76
WHAMMP3-204ENST00000622062 PALD1Q9ULE6 856 aa10.33□□□□□ -0.76
WHAMMP3-204ENST00000622062 PXDNQ92626 1479 aa10.32□□□□□ -0.76
WHAMMP3-204ENST00000622062 ATP5J2-PTCD1G3V325 749 aa10.32□□□□□ -0.76
WHAMMP3-204ENST00000622062 PTCD1O75127 700 aaKnown RBP10.32□□□□□ -0.76
WHAMMP3-204ENST00000622062 SNX21Q969T3 373 aa10.32□□□□□ -0.76
WHAMMP3-204ENST00000622062 FMN2Q9NZ56 1722 aa10.32□□□□□ -0.76
WHAMMP3-204ENST00000622062 NWD1Q149M9 1564 aa10.32□□□□□ -0.76
WHAMMP3-204ENST00000622062 A0A0G2JS52 829 aa10.32□□□□□ -0.76
WHAMMP3-204ENST00000622062 TATP17735 454 aaPredicted RBP10.32□□□□□ -0.76
WHAMMP3-204ENST00000622062 ZNF496Q96IT1 587 aaPredicted RBP10.32□□□□□ -0.76
WHAMMP3-204ENST00000622062 SPG7Q9UQ90 795 aa10.32□□□□□ -0.76
WHAMMP3-204ENST00000622062 USP16Q9Y5T5 823 aa10.32□□□□□ -0.76
WHAMMP3-204ENST00000622062 AK9Q5TCS8 1911 aa10.32□□□□□ -0.76
WHAMMP3-204ENST00000622062 CEMIPQ8WUJ3 1361 aa10.32□□□□□ -0.76
WHAMMP3-204ENST00000622062 ST18O60284 1047 aa10.31□□□□□ -0.76
WHAMMP3-204ENST00000622062 RABEP1Q15276 862 aa10.31□□□□□ -0.76
WHAMMP3-204ENST00000622062 ZNF790Q6PG37 636 aa10.31□□□□□ -0.76
WHAMMP3-204ENST00000622062 COPS6Q7L5N1 327 aa10.31□□□□□ -0.76
WHAMMP3-204ENST00000622062 TTC5Q8N0Z6 440 aa10.31□□□□□ -0.76
WHAMMP3-204ENST00000622062 CCDC8Q9H0W5 538 aaPredicted RBP10.31□□□□□ -0.76
WHAMMP3-204ENST00000622062 STRCQ7RTU9 1775 aa10.31□□□□□ -0.76
WHAMMP3-204ENST00000622062 CHMP3Q9Y3E7 222 aa10.3□□□□□ -0.76
WHAMMP3-204ENST00000622062 RGPD2P0DJD1 1756 aa10.3□□□□□ -0.76
WHAMMP3-204ENST00000622062 GOLGB1Q14789 3259 aaKnown RBP10.3□□□□□ -0.76
WHAMMP3-204ENST00000622062 IBTKQ9P2D0 1353 aaPredicted RBP10.3□□□□□ -0.76
WHAMMP3-204ENST00000622062 CHMLP26374 656 aa10.3□□□□□ -0.76
WHAMMP3-204ENST00000622062 TOM1L2Q6ZVM7 507 aa10.3□□□□□ -0.76
WHAMMP3-204ENST00000622062 SSH3Q8TE77 659 aa10.3□□□□□ -0.76
WHAMMP3-204ENST00000622062 XAGE3Q8WTP9 111 aa10.3□□□□□ -0.76
WHAMMP3-204ENST00000622062 MYD88Q99836 296 aa10.3□□□□□ -0.76
WHAMMP3-204ENST00000622062 ESYT1Q9BSJ8 1104 aa10.3□□□□□ -0.76
WHAMMP3-204ENST00000622062 PANK2Q9BZ23 570 aa10.3□□□□□ -0.76
WHAMMP3-204ENST00000622062 PRDM11Q9NQV5 511 aa10.3□□□□□ -0.76
WHAMMP3-204ENST00000622062 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.3□□□□□ -0.76
WHAMMP3-204ENST00000622062 LTN1O94822 1766 aa10.3□□□□□ -0.76
WHAMMP3-204ENST00000622062 MCTP1Q6DN14 999 aa10.3□□□□□ -0.76
WHAMMP3-204ENST00000622062 KSR2Q6VAB6 950 aa10.3□□□□□ -0.76
WHAMMP3-204ENST00000622062 FBXO41Q8TF61 875 aa10.3□□□□□ -0.76
WHAMMP3-204ENST00000622062 ADCY9O60503 1353 aa10.29□□□□□ -0.76
WHAMMP3-204ENST00000622062 BICC1Q9H694 974 aaKnown RBP10.29□□□□□ -0.76
WHAMMP3-204ENST00000622062 NDUFB9Q9Y6M9 179 aa10.29□□□□□ -0.76
WHAMMP3-204ENST00000622062 C1orf167Q5SNV9 1468 aa10.29□□□□□ -0.76
WHAMMP3-204ENST00000622062 CYP27B1O15528 508 aa10.29□□□□□ -0.76
WHAMMP3-204ENST00000622062 CPA1P15085 419 aa10.29□□□□□ -0.76
WHAMMP3-204ENST00000622062 AACSQ86V21 672 aa10.29□□□□□ -0.76
WHAMMP3-204ENST00000622062 CLASRPQ8N2M8 674 aaKnown RBP10.29□□□□□ -0.76
WHAMMP3-204ENST00000622062 KIF1BPQ96EK5 621 aa10.29□□□□□ -0.76
WHAMMP3-204ENST00000622062 GBP4Q96PP9 640 aa10.29□□□□□ -0.76
WHAMMP3-204ENST00000622062 RNF216Q9NWF9 866 aaPredicted RBP10.29□□□□□ -0.76
WHAMMP3-204ENST00000622062 CHD2O14647 1828 aaKnown RBP10.29□□□□□ -0.76
WHAMMP3-204ENST00000622062 NPHP3Q7Z494 1330 aa10.28□□□□□ -0.76
WHAMMP3-204ENST00000622062 IFIT2P09913 472 aaKnown RBP10.28□□□□□ -0.76
WHAMMP3-204ENST00000622062 CABP4P57796 275 aa10.28□□□□□ -0.76
WHAMMP3-204ENST00000622062 SUCLG2Q96I99 432 aa10.28□□□□□ -0.76
WHAMMP3-204ENST00000622062 GOLGA6L3A6NEY3 463 aa10.28□□□□□ -0.76
WHAMMP3-204ENST00000622062 ECM2O94769 699 aaPredicted RBP10.28□□□□□ -0.76
WHAMMP3-204ENST00000622062 PHKG2P15735 406 aa10.28□□□□□ -0.76
WHAMMP3-204ENST00000622062 CADPS2Q86UW7 1296 aa10.28□□□□□ -0.76
WHAMMP3-204ENST00000622062 SLC52A2Q9HAB3 445 aa10.28□□□□□ -0.76
WHAMMP3-204ENST00000622062 BABAM1Q9NWV8 329 aa10.28□□□□□ -0.76
WHAMMP3-204ENST00000622062 GRM8O00222 908 aa10.27□□□□□ -0.76
WHAMMP3-204ENST00000622062 RAB3GAP1Q15042 981 aa10.27□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms