RNA–Protein interactions for RNA: ENST00000621134.4

LINC01115-202, Transcript of long intergenic non-protein coding RNA 1115, humanhuman

TSL 1 (best) BASIC

Gene LINC01115, Length 1,519 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01115-202ENST00000621134 USP42Q9H9J4 1324 aaKnown RBP16.37■□□□□ 0.21
LINC01115-202ENST00000621134 VSIG10Q8N0Z9 540 aa16.37■□□□□ 0.21
LINC01115-202ENST00000621134 SRP68Q9UHB9 627 aaKnown RBP16.37■□□□□ 0.21
LINC01115-202ENST00000621134 NUDCQ9Y266 331 aa16.37■□□□□ 0.21
LINC01115-202ENST00000621134 C10orf71Q711Q0 1435 aa16.37■□□□□ 0.21
LINC01115-202ENST00000621134 KIAA1551Q9HCM1 1747 aa16.36■□□□□ 0.21
LINC01115-202ENST00000621134 PXDNLA1KZ92 1463 aa16.35■□□□□ 0.21
LINC01115-202ENST00000621134 U2AF1L5P0DN76 240 aaPredicted RBP16.35■□□□□ 0.21
LINC01115-202ENST00000621134 U2AF1Q01081 240 aaKnown RBP eCLIP16.35■□□□□ 0.21
LINC01115-202ENST00000621134 FCHSD2O94868 740 aa16.35■□□□□ 0.21
LINC01115-202ENST00000621134 FKBP8Q14318 412 aa16.35■□□□□ 0.21
LINC01115-202ENST00000621134 TEFQ10587 303 aa16.34■□□□□ 0.21
LINC01115-202ENST00000621134 ZNF790Q6PG37 636 aa16.34■□□□□ 0.21
LINC01115-202ENST00000621134 ZNF496Q96IT1 587 aaPredicted RBP16.34■□□□□ 0.21
LINC01115-202ENST00000621134 ZBTB1Q9Y2K1 713 aa16.34■□□□□ 0.21
LINC01115-202ENST00000621134 DDR1Q08345 913 aa16.33■□□□□ 0.2
LINC01115-202ENST00000621134 TGFB2P61812 414 aa16.32■□□□□ 0.2
LINC01115-202ENST00000621134 TTC5Q8N0Z6 440 aa16.32■□□□□ 0.2
LINC01115-202ENST00000621134 PARP3Q9Y6F1 533 aa16.32■□□□□ 0.2
LINC01115-202ENST00000621134 HEG1Q9ULI3 1381 aa16.32■□□□□ 0.2
LINC01115-202ENST00000621134 NEFLP07196 543 aa16.31■□□□□ 0.2
LINC01115-202ENST00000621134 TM4SF1P30408 202 aa16.31■□□□□ 0.2
LINC01115-202ENST00000621134 WWC3Q9ULE0 1092 aa16.31■□□□□ 0.2
LINC01115-202ENST00000621134 COL15A1P39059 1388 aa16.31■□□□□ 0.2
LINC01115-202ENST00000621134 NARFQ9UHQ1 456 aa16.3■□□□□ 0.2
LINC01115-202ENST00000621134 SUPT16HQ9Y5B9 1047 aaKnown RBP16.3■□□□□ 0.2
LINC01115-202ENST00000621134 N4BP2Q86UW6 1770 aaPredicted RBP16.3■□□□□ 0.2
LINC01115-202ENST00000621134 A0A0G2JLW4 131 aa16.29■□□□□ 0.2
LINC01115-202ENST00000621134 POLRMTO00411 1230 aaKnown RBP16.29■□□□□ 0.2
LINC01115-202ENST00000621134 KCNQ3O43525 872 aa16.29■□□□□ 0.2
LINC01115-202ENST00000621134 USPL1Q5W0Q7 1092 aa16.29■□□□□ 0.2
LINC01115-202ENST00000621134 BCL2L12Q9HB09 334 aa16.29■□□□□ 0.2
LINC01115-202ENST00000621134 ZPR1O75312 459 aa16.29■□□□□ 0.2
LINC01115-202ENST00000621134 STARD3NLO95772 234 aa16.29■□□□□ 0.2
LINC01115-202ENST00000621134 DPEP1P16444 411 aa16.29■□□□□ 0.2
LINC01115-202ENST00000621134 EIF5P55010 431 aaKnown RBP16.29■□□□□ 0.2
LINC01115-202ENST00000621134 ADCY9O60503 1353 aa16.28■□□□□ 0.2
LINC01115-202ENST00000621134 BTBD11A6QL63 1104 aa16.28■□□□□ 0.2
LINC01115-202ENST00000621134 HTATSF1O43719 755 aaKnown RBP16.28■□□□□ 0.2
LINC01115-202ENST00000621134 KCNA3P22001 575 aa16.28■□□□□ 0.2
LINC01115-202ENST00000621134 CANXP27824 592 aaKnown RBP16.28■□□□□ 0.2
LINC01115-202ENST00000621134 MCM10Q7L590 875 aa16.28■□□□□ 0.2
LINC01115-202ENST00000621134 FMNL2Q96PY5 1086 aa16.28■□□□□ 0.2
LINC01115-202ENST00000621134 BRCA1P38398 1863 aaKnown RBP16.27■□□□□ 0.2
LINC01115-202ENST00000621134 NFIXQ14938 502 aa16.27■□□□□ 0.2
LINC01115-202ENST00000621134 WDR43Q15061 677 aaKnown RBP eCLIP16.27■□□□□ 0.2
LINC01115-202ENST00000621134 PLEKHF1Q96S99 279 aa16.27■□□□□ 0.2
LINC01115-202ENST00000621134 TEX13AQ9BXU3 409 aaPredicted RBP16.27■□□□□ 0.2
LINC01115-202ENST00000621134 DCTN1Q14203 1278 aa16.26■□□□□ 0.19
LINC01115-202ENST00000621134 RTF1Q92541 710 aaKnown RBP16.25■□□□□ 0.19
LINC01115-202ENST00000621134 NRXN2Q9P2S2 1712 aa16.25■□□□□ 0.19
LINC01115-202ENST00000621134 ATP10DQ9P241 1426 aa16.25■□□□□ 0.19
LINC01115-202ENST00000621134 A1BGP04217 495 aa16.24■□□□□ 0.19
LINC01115-202ENST00000621134 A0A087WZG4 1122 aa16.24■□□□□ 0.19
LINC01115-202ENST00000621134 SENP3-EIF4A1A0A087X0R7 540 aa16.24■□□□□ 0.19
LINC01115-202ENST00000621134 BCS1LQ9Y276 419 aa16.24■□□□□ 0.19
LINC01115-202ENST00000621134 AFDNP55196 1824 aaKnown RBP16.23■□□□□ 0.19
LINC01115-202ENST00000621134 SCN7AQ01118 1682 aa16.23■□□□□ 0.19
LINC01115-202ENST00000621134 IL6STP40189 918 aaPredicted RBP16.23■□□□□ 0.19
LINC01115-202ENST00000621134 ADAMTS8Q9UP79 889 aa16.23■□□□□ 0.19
LINC01115-202ENST00000621134 USP16Q9Y5T5 823 aa16.23■□□□□ 0.19
LINC01115-202ENST00000621134 PRAMEF22A3QJZ6 481 aa16.22■□□□□ 0.19
LINC01115-202ENST00000621134 DLG5Q8TDM6 1919 aa16.22■□□□□ 0.19
LINC01115-202ENST00000621134 CHRNA5P30532 468 aa16.21■□□□□ 0.19
LINC01115-202ENST00000621134 TAF7Q15545 349 aaPredicted RBP16.21■□□□□ 0.19
LINC01115-202ENST00000621134 PIM2Q9P1W9 311 aa16.21■□□□□ 0.19
LINC01115-202ENST00000621134 SERPINB2P05120 415 aa16.2■□□□□ 0.18
LINC01115-202ENST00000621134 SNRPA1P09661 255 aaKnown RBP16.2■□□□□ 0.18
LINC01115-202ENST00000621134 C1QTNF8P60827 252 aa16.2■□□□□ 0.18
LINC01115-202ENST00000621134 NFE2L2Q16236 605 aa16.2■□□□□ 0.18
LINC01115-202ENST00000621134 TBC1D2BQ9UPU7 963 aa16.2■□□□□ 0.18
LINC01115-202ENST00000621134 ARFGEF1Q9Y6D6 1849 aa16.2■□□□□ 0.18
LINC01115-202ENST00000621134 CAMTA2O94983 1202 aa16.19■□□□□ 0.18
LINC01115-202ENST00000621134 TBC1D9BQ66K14 1250 aa16.19■□□□□ 0.18
LINC01115-202ENST00000621134 CARMIL3Q8ND23 1372 aa16.19■□□□□ 0.18
LINC01115-202ENST00000621134 GIGYF1O75420 1035 aaPredicted RBP16.19■□□□□ 0.18
LINC01115-202ENST00000621134 DALRD3Q5D0E6 543 aaKnown RBP16.19■□□□□ 0.18
LINC01115-202ENST00000621134 MIS18AQ9NYP9 233 aa16.19■□□□□ 0.18
LINC01115-202ENST00000621134 SALL2Q9Y467 1007 aaPredicted RBP16.19■□□□□ 0.18
LINC01115-202ENST00000621134 NBPF26B4DH59 902 aa16.18■□□□□ 0.18
LINC01115-202ENST00000621134 NEFMP07197 916 aa16.18■□□□□ 0.18
LINC01115-202ENST00000621134 PIP4K2AP48426 406 aaPredicted RBP16.18■□□□□ 0.18
LINC01115-202ENST00000621134 NBPF10Q6P3W6 841 aaKnown RBP16.18■□□□□ 0.18
LINC01115-202ENST00000621134 ARHGAP27Q6ZUM4 889 aa16.18■□□□□ 0.18
LINC01115-202ENST00000621134 NBPF15Q8N660 670 aa16.18■□□□□ 0.18
LINC01115-202ENST00000621134 THUMPD2Q9BTF0 503 aaKnown RBP16.18■□□□□ 0.18
LINC01115-202ENST00000621134 ZNF330Q9Y3S2 320 aaPredicted RBP16.18■□□□□ 0.18
LINC01115-202ENST00000621134 BCORQ6W2J9 1755 aa16.17■□□□□ 0.18
LINC01115-202ENST00000621134 KDM3BQ7LBC6 1761 aa16.17■□□□□ 0.18
LINC01115-202ENST00000621134 BICDL1Q6ZP65 573 aa16.17■□□□□ 0.18
LINC01115-202ENST00000621134 DZIP3Q86Y13 1208 aaKnown RBP16.16■□□□□ 0.18
LINC01115-202ENST00000621134 PNNQ9H307 717 aaKnown RBP16.16■□□□□ 0.18
LINC01115-202ENST00000621134 DLEC1Q9Y238 1755 aa16.16■□□□□ 0.18
LINC01115-202ENST00000621134 RNF39Q9H2S5 420 aa16.15■□□□□ 0.18
LINC01115-202ENST00000621134 GPBP1L1Q9HC44 474 aaPredicted RBP16.15■□□□□ 0.18
LINC01115-202ENST00000621134 ANKRD31Q8N7Z5 1873 aa16.15■□□□□ 0.18
LINC01115-202ENST00000621134 MAPK8IP3Q9UPT6 1336 aa16.15■□□□□ 0.18
LINC01115-202ENST00000621134 PRR5LQ6MZQ0 368 aa16.14■□□□□ 0.18
LINC01115-202ENST00000621134 LAMB4A4D0S4 1761 aa16.14■□□□□ 0.17
LINC01115-202ENST00000621134 EIF4A1P60842 406 aaKnown RBP16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms