RNA–Protein interactions for RNA: ENST00000621029.4

SEMA3B-215, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-215ENST00000621029 UTRNP46939 3433 aa38.45■■■■□ 3.75
SEMA3B-215ENST00000621029 USPL1Q5W0Q7 1092 aa38.45■■■■□ 3.75
SEMA3B-215ENST00000621029 KCNQ3O43525 872 aa38.44■■■■□ 3.74
SEMA3B-215ENST00000621029 UBR2Q8IWV8 1755 aa38.44■■■■□ 3.74
SEMA3B-215ENST00000621029 COL15A1P39059 1388 aa38.44■■■■□ 3.74
SEMA3B-215ENST00000621029 MAPK8IP3Q9UPT6 1336 aa38.43■■■■□ 3.74
SEMA3B-215ENST00000621029 ZNF330Q9Y3S2 320 aaPredicted RBP38.42■■■■□ 3.74
SEMA3B-215ENST00000621029 SIPA1L3O60292 1781 aaPredicted RBP38.41■■■■□ 3.74
SEMA3B-215ENST00000621029 MYBBP1AQ9BQG0 1328 aaKnown RBP38.4■■■■□ 3.74
SEMA3B-215ENST00000621029 NARFQ9UHQ1 456 aa38.4■■■■□ 3.74
SEMA3B-215ENST00000621029 ZEB1P37275 1124 aaPredicted RBP38.39■■■■□ 3.74
SEMA3B-215ENST00000621029 PLEKHF1Q96S99 279 aa38.39■■■■□ 3.74
SEMA3B-215ENST00000621029 TGFB2P61812 414 aa38.37■■■■□ 3.73
SEMA3B-215ENST00000621029 NPM2Q86SE8 214 aaKnown RBP38.37■■■■□ 3.73
SEMA3B-215ENST00000621029 A0A087WZG4 1122 aa38.36■■■■□ 3.73
SEMA3B-215ENST00000621029 DDR1Q08345 913 aa38.36■■■■□ 3.73
SEMA3B-215ENST00000621029 TAF7Q15545 349 aaPredicted RBP38.36■■■■□ 3.73
SEMA3B-215ENST00000621029 NFE2L2Q16236 605 aa38.36■■■■□ 3.73
SEMA3B-215ENST00000621029 ZNF784Q8NCA9 323 aaPredicted RBP38.36■■■■□ 3.73
SEMA3B-215ENST00000621029 CHD4Q14839 1912 aa38.36■■■■□ 3.73
SEMA3B-215ENST00000621029 GOLGB1Q14789 3259 aaKnown RBP38.35■■■■□ 3.73
SEMA3B-215ENST00000621029 A0A0G2JLW4 131 aa38.35■■■■□ 3.73
SEMA3B-215ENST00000621029 C10orf71Q711Q0 1435 aa38.35■■■■□ 3.73
SEMA3B-215ENST00000621029 A1BGP04217 495 aa38.33■■■■□ 3.73
SEMA3B-215ENST00000621029 EIF5P55010 431 aaKnown RBP38.33■■■■□ 3.73
SEMA3B-215ENST00000621029 TM4SF1P30408 202 aa38.32■■■■□ 3.72
SEMA3B-215ENST00000621029 MIS18AQ9NYP9 233 aa38.32■■■■□ 3.72
SEMA3B-215ENST00000621029 PXDNLA1KZ92 1463 aa38.31■■■■□ 3.72
SEMA3B-215ENST00000621029 POLRMTO00411 1230 aaKnown RBP38.3■■■■□ 3.72
SEMA3B-215ENST00000621029 SNRPA1P09661 255 aaKnown RBP38.3■■■■□ 3.72
SEMA3B-215ENST00000621029 USP16Q9Y5T5 823 aa38.3■■■■□ 3.72
SEMA3B-215ENST00000621029 DPEP1P16444 411 aa38.29■■■■□ 3.72
SEMA3B-215ENST00000621029 IL6STP40189 918 aaPredicted RBP38.29■■■■□ 3.72
SEMA3B-215ENST00000621029 NFIXQ14938 502 aa38.29■■■■□ 3.72
SEMA3B-215ENST00000621029 TBC1D2BQ9UPU7 963 aa38.28■■■■□ 3.72
SEMA3B-215ENST00000621029 PRAMEF22A3QJZ6 481 aa38.27■■■■□ 3.72
SEMA3B-215ENST00000621029 BICDL1Q6ZP65 573 aa38.27■■■■□ 3.72
SEMA3B-215ENST00000621029 PNISRQ8TF01 805 aaKnown RBP38.27■■■■□ 3.72
SEMA3B-215ENST00000621029 THUMPD2Q9BTF0 503 aaKnown RBP38.27■■■■□ 3.72
SEMA3B-215ENST00000621029 BCL2L12Q9HB09 334 aa38.27■■■■□ 3.72
SEMA3B-215ENST00000621029 BCS1LQ9Y276 419 aa38.27■■■■□ 3.72
SEMA3B-215ENST00000621029 WDR43Q15061 677 aaKnown RBP eCLIP38.26■■■■□ 3.727e-9■■■□□ 15.1
SEMA3B-215ENST00000621029 PIP4K2AP48426 406 aaPredicted RBP38.24■■■■□ 3.71
SEMA3B-215ENST00000621029 KIF13BQ9NQT8 1826 aa38.24■■■■□ 3.71
SEMA3B-215ENST00000621029 RIPK4P57078 832 aa38.22■■■■□ 3.71
SEMA3B-215ENST00000621029 SERPINB2P05120 415 aa38.21■■■■□ 3.71
SEMA3B-215ENST00000621029 PRKRIP1Q9H875 184 aaPredicted RBP38.21■■■■□ 3.71
SEMA3B-215ENST00000621029 N4BP2Q86UW6 1770 aaPredicted RBP38.21■■■■□ 3.71
SEMA3B-215ENST00000621029 CCDC146Q8IYE0 955 aa38.19■■■■□ 3.7
SEMA3B-215ENST00000621029 DLG5Q8TDM6 1919 aa38.18■■■■□ 3.7
SEMA3B-215ENST00000621029 DZIP3Q86Y13 1208 aaKnown RBP38.18■■■■□ 3.7
SEMA3B-215ENST00000621029 PIM2Q9P1W9 311 aa38.18■■■■□ 3.7
SEMA3B-215ENST00000621029 CHRNA5P30532 468 aa38.17■■■■□ 3.7
SEMA3B-215ENST00000621029 TBC1D9BQ66K14 1250 aa38.17■■■■□ 3.7
SEMA3B-215ENST00000621029 TMPOP42166 694 aaKnown RBP38.15■■■■□ 3.7
SEMA3B-215ENST00000621029 RRP7AQ9Y3A4 280 aaKnown RBP38.15■■■■□ 3.7
SEMA3B-215ENST00000621029 KIAA1551Q9HCM1 1747 aa38.15■■■■□ 3.7
SEMA3B-215ENST00000621029 KCNA3P22001 575 aa38.14■■■■□ 3.7
SEMA3B-215ENST00000621029 LMOD3Q0VAK6 560 aa38.14■■■■□ 3.7
SEMA3B-215ENST00000621029 NEUROD2Q15784 382 aa38.14■■■■□ 3.7
SEMA3B-215ENST00000621029 ARHGAP27Q6ZUM4 889 aa38.14■■■■□ 3.7
SEMA3B-215ENST00000621029 CAMTA2O94983 1202 aa38.13■■■■□ 3.69
SEMA3B-215ENST00000621029 DALRD3Q5D0E6 543 aaKnown RBP38.13■■■■□ 3.69
SEMA3B-215ENST00000621029 RUNDC1Q96C34 613 aa38.11■■■■□ 3.69
SEMA3B-215ENST00000621029 TSPYL4Q9UJ04 414 aa38.11■■■■□ 3.69
SEMA3B-215ENST00000621029 NPHP1O15259 732 aa38.1■■■■□ 3.69
SEMA3B-215ENST00000621029 EIF4A1P60842 406 aaKnown RBP38.1■■■■□ 3.69
SEMA3B-215ENST00000621029 SETDB2Q96T68 719 aa38.1■■■■□ 3.69
SEMA3B-215ENST00000621029 ADAMTS8Q9UP79 889 aa38.1■■■■□ 3.69
SEMA3B-215ENST00000621029 NBPF26B4DH59 902 aa38.09■■■■□ 3.69
SEMA3B-215ENST00000621029 NBPF10Q6P3W6 841 aaKnown RBP38.09■■■■□ 3.69
SEMA3B-215ENST00000621029 NBPF15Q8N660 670 aa38.09■■■■□ 3.69
SEMA3B-215ENST00000621029 GIGYF1O75420 1035 aaPredicted RBP38.08■■■■□ 3.69
SEMA3B-215ENST00000621029 CARMIL3Q8ND23 1372 aa38.06■■■■□ 3.68
SEMA3B-215ENST00000621029 ZNF652Q9Y2D9 606 aa38.06■■■■□ 3.68
SEMA3B-215ENST00000621029 SCN7AQ01118 1682 aa38.06■■■■□ 3.68
SEMA3B-215ENST00000621029 ATP10DQ9P241 1426 aa38.05■■■■□ 3.68
SEMA3B-215ENST00000621029 C2CD5Q86YS7 1000 aa38.05■■■■□ 3.68
SEMA3B-215ENST00000621029 NGEFQ8N5V2 710 aa38.05■■■■□ 3.68
SEMA3B-215ENST00000621029 AFDNP55196 1824 aaKnown RBP38.04■■■■□ 3.68
SEMA3B-215ENST00000621029 CCDC24Q8N4L8 307 aa38.03■■■■□ 3.68
SEMA3B-215ENST00000621029 KDM3BQ7LBC6 1761 aa38.03■■■■□ 3.68
SEMA3B-215ENST00000621029 H0YIN7 160 aa38.02■■■■□ 3.68
SEMA3B-215ENST00000621029 ZNF526Q8TF50 670 aaPredicted RBP38.02■■■■□ 3.68
SEMA3B-215ENST00000621029 PRR5LQ6MZQ0 368 aa38.01■■■■□ 3.68
SEMA3B-215ENST00000621029 CLEC4GQ6UXB4 293 aa38.01■■■■□ 3.68
SEMA3B-215ENST00000621029 CNBD1Q8NA66 436 aa38.01■■■■□ 3.68
SEMA3B-215ENST00000621029 NRXN2Q9P2S2 1712 aa38■■■■□ 3.67
SEMA3B-215ENST00000621029 MYL6BP14649 208 aa37.99■■■■□ 3.67
SEMA3B-215ENST00000621029 LAS1LQ9Y4W2 734 aaKnown RBP37.99■■■■□ 3.67
SEMA3B-215ENST00000621029 ZNF316A6NFI3 1004 aaPredicted RBP37.98■■■■□ 3.67
SEMA3B-215ENST00000621029 PDE6BP35913 854 aa37.98■■■■□ 3.67
SEMA3B-215ENST00000621029 BRIP1Q9BX63 1249 aa37.98■■■■□ 3.67
SEMA3B-215ENST00000621029 GPBP1L1Q9HC44 474 aaPredicted RBP37.98■■■■□ 3.67
SEMA3B-215ENST00000621029 ST5P78524 1137 aa37.97■■■■□ 3.67
SEMA3B-215ENST00000621029 BABAM1Q9NWV8 329 aa37.97■■■■□ 3.67
SEMA3B-215ENST00000621029 BRCA1P38398 1863 aaKnown RBP37.96■■■■□ 3.67
SEMA3B-215ENST00000621029 ADCY9O60503 1353 aa37.96■■■■□ 3.67
SEMA3B-215ENST00000621029 NBPF5PQ86XG9 351 aaPredicted RBP37.96■■■■□ 3.67
SEMA3B-215ENST00000621029 LAMB4A4D0S4 1761 aa37.96■■■■□ 3.67
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms