RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 LRMPQ12912 555 aa8.31□□□□□ -1.08
NEDD9-216ENST00000620854 FBXW7Q969H0 707 aa8.31□□□□□ -1.08
NEDD9-216ENST00000620854 PUS7Q96PZ0 661 aaKnown RBP8.31□□□□□ -1.08
NEDD9-216ENST00000620854 TFIP11Q9UBB9 837 aaKnown RBP8.31□□□□□ -1.08
NEDD9-216ENST00000620854 FAM135BQ49AJ0 1406 aa8.31□□□□□ -1.08
NEDD9-216ENST00000620854 ADGRB2O60241 1585 aa8.31□□□□□ -1.08
NEDD9-216ENST00000620854 ABCA9Q8IUA7 1624 aa8.31□□□□□ -1.08
NEDD9-216ENST00000620854 PTGS1P23219 599 aa8.31□□□□□ -1.08
NEDD9-216ENST00000620854 PNPLA6Q8IY17 1366 aa8.31□□□□□ -1.08
NEDD9-216ENST00000620854 YTHDC2Q9H6S0 1430 aaKnown RBP8.31□□□□□ -1.08
NEDD9-216ENST00000620854 ADGRB1O14514 1584 aa8.31□□□□□ -1.08
NEDD9-216ENST00000620854 CUL4AQ13619 759 aa8.3□□□□□ -1.08
NEDD9-216ENST00000620854 EIF4A2Q14240 407 aaKnown RBP8.3□□□□□ -1.08
NEDD9-216ENST00000620854 GORABQ5T7V8 394 aa8.3□□□□□ -1.08
NEDD9-216ENST00000620854 CADPS2Q86UW7 1296 aa8.3□□□□□ -1.08
NEDD9-216ENST00000620854 LUZP1Q86V48 1076 aa8.3□□□□□ -1.08
NEDD9-216ENST00000620854 KCNH5Q8NCM2 988 aa8.3□□□□□ -1.08
NEDD9-216ENST00000620854 PRDM11Q9NQV5 511 aa8.3□□□□□ -1.08
NEDD9-216ENST00000620854 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.3□□□□□ -1.085e-7■■■□□ 17.2
NEDD9-216ENST00000620854 V9GYY5 206 aaPredicted RBP8.3□□□□□ -1.08
NEDD9-216ENST00000620854 ACEP12821 1306 aa8.3□□□□□ -1.08
NEDD9-216ENST00000620854 PIK3R4Q99570 1358 aa8.3□□□□□ -1.08
NEDD9-216ENST00000620854 COL3A1P02461 1466 aaPredicted RBP8.3□□□□□ -1.08
NEDD9-216ENST00000620854 RIMBP3CA6NJZ7 1639 aa8.3□□□□□ -1.08
NEDD9-216ENST00000620854 RIMBP3BA6NNM3 1639 aa8.3□□□□□ -1.08
NEDD9-216ENST00000620854 RIMBP3Q9UFD9 1639 aa8.3□□□□□ -1.08
NEDD9-216ENST00000620854 LARGE1O95461 756 aa8.3□□□□□ -1.08
NEDD9-216ENST00000620854 ZSCAN22P10073 491 aaPredicted RBP8.3□□□□□ -1.08
NEDD9-216ENST00000620854 ZC3H6P61129 1189 aaKnown RBP8.3□□□□□ -1.08
NEDD9-216ENST00000620854 PRIMPOLQ96LW4 560 aa8.3□□□□□ -1.08
NEDD9-216ENST00000620854 CHL1O00533 1208 aa8.3□□□□□ -1.08
NEDD9-216ENST00000620854 PPFIA3O75145 1194 aa8.3□□□□□ -1.08
NEDD9-216ENST00000620854 ZNF771Q7L3S4 317 aaPredicted RBP8.3□□□□□ -1.08
NEDD9-216ENST00000620854 ATP10DQ9P241 1426 aa8.3□□□□□ -1.08
NEDD9-216ENST00000620854 NRBP1Q9UHY1 535 aa8.3□□□□□ -1.08
NEDD9-216ENST00000620854 HDAC5Q9UQL6 1122 aa8.3□□□□□ -1.08
NEDD9-216ENST00000620854 FAM184AQ8NB25 1140 aa8.29□□□□□ -1.08
NEDD9-216ENST00000620854 KCNA6P17658 529 aa8.29□□□□□ -1.08
NEDD9-216ENST00000620854 GJB2P29033 226 aa8.29□□□□□ -1.08
NEDD9-216ENST00000620854 FOSBP53539 338 aa8.29□□□□□ -1.08
NEDD9-216ENST00000620854 CEBPZQ03701 1054 aaKnown RBP8.29□□□□□ -1.08
NEDD9-216ENST00000620854 DMTNQ08495 405 aa8.29□□□□□ -1.08
NEDD9-216ENST00000620854 STK3Q13188 491 aa8.29□□□□□ -1.08
NEDD9-216ENST00000620854 MEX3CQ5U5Q3 659 aaKnown RBP8.29□□□□□ -1.08
NEDD9-216ENST00000620854 CCDC186Q7Z3E2 898 aa8.29□□□□□ -1.08
NEDD9-216ENST00000620854 CREBRFQ8IUR6 639 aa8.29□□□□□ -1.08
NEDD9-216ENST00000620854 KIAA1210Q9ULL0 1709 aa8.29□□□□□ -1.08
NEDD9-216ENST00000620854 UBE2HP62256 183 aa8.29□□□□□ -1.08
NEDD9-216ENST00000620854 PLEKHO1Q53GL0 409 aaPredicted RBP8.29□□□□□ -1.08
NEDD9-216ENST00000620854 INTS4Q96HW7 963 aaKnown RBP8.29□□□□□ -1.08
NEDD9-216ENST00000620854 TRIM5Q9C035 493 aa8.29□□□□□ -1.08
NEDD9-216ENST00000620854 KCNF1Q9H3M0 494 aa8.29□□□□□ -1.08
NEDD9-216ENST00000620854 STRN4Q9NRL3 753 aa8.29□□□□□ -1.08
NEDD9-216ENST00000620854 TMEM2Q9UHN6 1383 aa8.29□□□□□ -1.08
NEDD9-216ENST00000620854 ANXA1P04083 346 aa8.29□□□□□ -1.08
NEDD9-216ENST00000620854 PRPF40BQ6NWY9 871 aaKnown RBP8.29□□□□□ -1.08
NEDD9-216ENST00000620854 JAKMIP1Q96N16 626 aaKnown RBP8.29□□□□□ -1.08
NEDD9-216ENST00000620854 NRXN1Q9ULB1 1477 aa8.28□□□□□ -1.08
NEDD9-216ENST00000620854 FLIIQ13045 1269 aa8.28□□□□□ -1.08
NEDD9-216ENST00000620854 RUFY3Q7L099 469 aa8.28□□□□□ -1.08
NEDD9-216ENST00000620854 SYTL4Q96C24 671 aaPredicted RBP8.28□□□□□ -1.08
NEDD9-216ENST00000620854 EFCAB6Q5THR3 1501 aa8.28□□□□□ -1.08
NEDD9-216ENST00000620854 F13A1P00488 732 aa8.28□□□□□ -1.08
NEDD9-216ENST00000620854 UBTFL1P0CB47 393 aaPredicted RBP8.28□□□□□ -1.08
NEDD9-216ENST00000620854 CCT4P50991 539 aaKnown RBP8.28□□□□□ -1.08
NEDD9-216ENST00000620854 PIP4K2BP78356 416 aa8.28□□□□□ -1.08
NEDD9-216ENST00000620854 SF3A1Q15459 793 aaKnown RBP8.28□□□□□ -1.08
NEDD9-216ENST00000620854 GPATCH3Q96I76 525 aa8.28□□□□□ -1.08
NEDD9-216ENST00000620854 SNX14Q9Y5W7 946 aa8.28□□□□□ -1.08
NEDD9-216ENST00000620854 PPRC1Q5VV67 1664 aaKnown RBP8.28□□□□□ -1.08
NEDD9-216ENST00000620854 SRGAP3O43295 1099 aa8.28□□□□□ -1.08
NEDD9-216ENST00000620854 HTATSF1O43719 755 aaKnown RBP8.28□□□□□ -1.08
NEDD9-216ENST00000620854 ADCK5Q3MIX3 580 aa8.28□□□□□ -1.08
NEDD9-216ENST00000620854 DIAPH3Q9NSV4 1193 aa8.28□□□□□ -1.08
NEDD9-216ENST00000620854 CGNQ9P2M7 1197 aaKnown RBP8.28□□□□□ -1.08
NEDD9-216ENST00000620854 LIMCH1Q9UPQ0 1083 aa8.28□□□□□ -1.08
NEDD9-216ENST00000620854 GLI2P10070 1586 aa8.27□□□□□ -1.08
NEDD9-216ENST00000620854 A0A087WWV3 80 aa8.27□□□□□ -1.09
NEDD9-216ENST00000620854 TATP17735 454 aaPredicted RBP8.27□□□□□ -1.09
NEDD9-216ENST00000620854 MTHFSDQ2M296 383 aaKnown RBP8.27□□□□□ -1.09
NEDD9-216ENST00000620854 TOM1L2Q6ZVM7 507 aa8.27□□□□□ -1.09
NEDD9-216ENST00000620854 KIAA1524Q8TCG1 905 aa8.27□□□□□ -1.09
NEDD9-216ENST00000620854 PTPRCP08575 1304 aa8.27□□□□□ -1.09
NEDD9-216ENST00000620854 UVSSAQ2YD98 709 aa8.27□□□□□ -1.09
NEDD9-216ENST00000620854 LARP1BQ659C4 914 aaKnown RBP8.27□□□□□ -1.09
NEDD9-216ENST00000620854 PPP1R42Q7Z4L9 355 aa8.27□□□□□ -1.09
NEDD9-216ENST00000620854 PHAXQ9H814 394 aaKnown RBP8.27□□□□□ -1.09
NEDD9-216ENST00000620854 CD163L1Q9NR16 1453 aa8.27□□□□□ -1.09
NEDD9-216ENST00000620854 CCDC192P0DO97 292 aa8.27□□□□□ -1.09
NEDD9-216ENST00000620854 LIG1P18858 919 aa8.27□□□□□ -1.09
NEDD9-216ENST00000620854 COL9A3Q14050 684 aaPredicted RBP8.27□□□□□ -1.09
NEDD9-216ENST00000620854 KRT28Q7Z3Y7 464 aa8.27□□□□□ -1.09
NEDD9-216ENST00000620854 OSBPL3Q9H4L5 887 aa8.27□□□□□ -1.09
NEDD9-216ENST00000620854 TOMM22Q9NS69 142 aa8.27□□□□□ -1.09
NEDD9-216ENST00000620854 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.27□□□□□ -1.09
NEDD9-216ENST00000620854 H3BQV1 296 aa8.26□□□□□ -1.09
NEDD9-216ENST00000620854 ZBTB22O15209 634 aa8.26□□□□□ -1.09
NEDD9-216ENST00000620854 GNAI3P08754 354 aa8.26□□□□□ -1.09
NEDD9-216ENST00000620854 HSPA4P34932 840 aa8.26□□□□□ -1.09
NEDD9-216ENST00000620854 ATP8B2P98198 1209 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms