RNA–Protein interactions for RNA: ENST00000620033.4

CHL1-216, Transcript of cell adhesion molecule L1 like, humanhuman

TSL 1 (best) BASIC

Gene CHL1, Length 7,311 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1-216ENST00000620033 PAGR1Q9BTK6 254 aa5.4□□□□□ -1.55
CHL1-216ENST00000620033 REC8O95072 547 aa5.39□□□□□ -1.55
CHL1-216ENST00000620033 RETREG2Q8NC44 543 aa5.39□□□□□ -1.55
CHL1-216ENST00000620033 BICD1Q96G01 975 aa5.39□□□□□ -1.55
CHL1-216ENST00000620033 MAP10Q9P2G4 905 aa5.39□□□□□ -1.55
CHL1-216ENST00000620033 CEP126Q9P2H0 1117 aa5.39□□□□□ -1.55
CHL1-216ENST00000620033 UHRF1BP1LA0JNW5 1464 aa5.39□□□□□ -1.55
CHL1-216ENST00000620033 SSBP05455 408 aaKnown RBP eCLIP5.39□□□□□ -1.55
CHL1-216ENST00000620033 SLC10A4Q96EP9 437 aa5.39□□□□□ -1.55
CHL1-216ENST00000620033 LRRCC1Q9C099 1032 aa5.39□□□□□ -1.55
CHL1-216ENST00000620033 PPP2R3CQ969Q6 453 aa5.39□□□□□ -1.55
CHL1-216ENST00000620033 SH2D4AQ9H788 454 aa5.39□□□□□ -1.55
CHL1-216ENST00000620033 NSFL1CQ9UNZ2 370 aaKnown RBP5.39□□□□□ -1.55
CHL1-216ENST00000620033 DZIP3Q86Y13 1208 aaKnown RBP5.39□□□□□ -1.55
CHL1-216ENST00000620033 SPATA32Q96LK8 384 aa5.39□□□□□ -1.55
CHL1-216ENST00000620033 USP48Q86UV5 1035 aa5.39□□□□□ -1.55
CHL1-216ENST00000620033 CCDC82Q8N4S0 544 aa5.39□□□□□ -1.55
CHL1-216ENST00000620033 NACA2Q9H009 215 aa5.39□□□□□ -1.55
CHL1-216ENST00000620033 MINDY4BA8MYZ0 360 aa5.39□□□□□ -1.55
CHL1-216ENST00000620033 RBM28Q9NW13 759 aaKnown RBP5.39□□□□□ -1.55
CHL1-216ENST00000620033 NBPF1Q3BBV0 1214 aa5.38□□□□□ -1.55
CHL1-216ENST00000620033 HOMER1Q86YM7 354 aa5.38□□□□□ -1.55
CHL1-216ENST00000620033 PIM2Q9P1W9 311 aa5.38□□□□□ -1.55
CHL1-216ENST00000620033 TNFAIP1Q13829 316 aa5.38□□□□□ -1.55
CHL1-216ENST00000620033 CHMP5Q9NZZ3 219 aa5.38□□□□□ -1.55
CHL1-216ENST00000620033 PCDH11XQ9BZA7 1347 aa5.38□□□□□ -1.55
CHL1-216ENST00000620033 PCDH11YQ9BZA8 1340 aa5.38□□□□□ -1.55
CHL1-216ENST00000620033 NOP56O00567 594 aaKnown RBP5.38□□□□□ -1.55
CHL1-216ENST00000620033 UFL1O94874 794 aa5.38□□□□□ -1.55
CHL1-216ENST00000620033 HSPA5P11021 654 aaKnown RBP5.38□□□□□ -1.55
CHL1-216ENST00000620033 NLRP5P59047 1200 aa5.38□□□□□ -1.55
CHL1-216ENST00000620033 DPP9Q86TI2 863 aa5.38□□□□□ -1.55
CHL1-216ENST00000620033 AP5M1Q9H0R1 490 aa5.38□□□□□ -1.55
CHL1-216ENST00000620033 CNKSR1Q969H4 720 aa5.38□□□□□ -1.55
CHL1-216ENST00000620033 CLUAP1Q96AJ1 413 aa5.38□□□□□ -1.55
CHL1-216ENST00000620033 API5Q9BZZ5 524 aaKnown RBP5.38□□□□□ -1.55
CHL1-216ENST00000620033 RAD50Q92878 1312 aa5.38□□□□□ -1.55
CHL1-216ENST00000620033 C9orf84Q5VXU9 1444 aa5.38□□□□□ -1.55
CHL1-216ENST00000620033 KIF28PB7ZC32 967 aa5.38□□□□□ -1.55
CHL1-216ENST00000620033 IREB2P48200 963 aaKnown RBP5.38□□□□□ -1.55
CHL1-216ENST00000620033 COA7Q96BR5 231 aa5.38□□□□□ -1.55
CHL1-216ENST00000620033 BMP2KQ9NSY1 1161 aaPredicted RBP5.38□□□□□ -1.55
CHL1-216ENST00000620033 CFAP74Q9C0B2 1584 aa5.37□□□□□ -1.55
CHL1-216ENST00000620033 SRGAP2BP0DMP2 458 aa5.37□□□□□ -1.55
CHL1-216ENST00000620033 DLGAP5Q15398 846 aa5.37□□□□□ -1.55
CHL1-216ENST00000620033 CHAMP1Q96JM3 812 aa5.37□□□□□ -1.55
CHL1-216ENST00000620033 ZBTB3Q9H5J0 574 aa5.37□□□□□ -1.55
CHL1-216ENST00000620033 SEPT11Q9NVA2 429 aaKnown RBP5.37□□□□□ -1.55
CHL1-216ENST00000620033 ARHGEF10O15013 1369 aa5.37□□□□□ -1.55
CHL1-216ENST00000620033 BAG4O95429 457 aaKnown RBP5.37□□□□□ -1.55
CHL1-216ENST00000620033 SSTR3P32745 418 aaPredicted RBP5.37□□□□□ -1.55
CHL1-216ENST00000620033 GGA1Q9UJY5 639 aa5.37□□□□□ -1.55
CHL1-216ENST00000620033 DCAF15Q66K64 600 aa5.37□□□□□ -1.55
CHL1-216ENST00000620033 UNC5CLQ8IV45 518 aa5.37□□□□□ -1.55
CHL1-216ENST00000620033 CNTROBQ8N137 903 aa5.37□□□□□ -1.55
CHL1-216ENST00000620033 DDX11Q96FC9 970 aa5.37□□□□□ -1.55
CHL1-216ENST00000620033 ANKRD2Q9GZV1 360 aa5.37□□□□□ -1.55
CHL1-216ENST00000620033 MAGEC2Q9UBF1 373 aaPredicted RBP5.37□□□□□ -1.55
CHL1-216ENST00000620033 IPO7O95373 1038 aaKnown RBP5.37□□□□□ -1.55
CHL1-216ENST00000620033 SMC1AQ14683 1233 aaKnown RBP5.37□□□□□ -1.55
CHL1-216ENST00000620033 ATP2B3Q16720 1220 aa5.37□□□□□ -1.55
CHL1-216ENST00000620033 ANKRD45Q5TZF3 282 aa5.37□□□□□ -1.55
CHL1-216ENST00000620033 LRRC45Q96CN5 670 aa5.37□□□□□ -1.55
CHL1-216ENST00000620033 SSR1P43307 286 aaKnown RBP5.37□□□□□ -1.55
CHL1-216ENST00000620033 MAP3K12Q12852 859 aa5.37□□□□□ -1.55
CHL1-216ENST00000620033 HACE1Q8IYU2 909 aa5.37□□□□□ -1.55
CHL1-216ENST00000620033 TRIM6Q9C030 488 aaPredicted RBP5.37□□□□□ -1.55
CHL1-216ENST00000620033 C1orf228Q6PIY5 440 aa5.36□□□□□ -1.55
CHL1-216ENST00000620033 GRIN2AQ12879 1464 aa5.36□□□□□ -1.55
CHL1-216ENST00000620033 CCNA1P78396 465 aa5.36□□□□□ -1.55
CHL1-216ENST00000620033 ABI1Q8IZP0 508 aa5.36□□□□□ -1.55
CHL1-216ENST00000620033 IQGAP2Q13576 1575 aa5.36□□□□□ -1.55
CHL1-216ENST00000620033 EFCAB5A4FU69 1503 aa5.36□□□□□ -1.55
CHL1-216ENST00000620033 KIF20AO95235 890 aa5.36□□□□□ -1.55
CHL1-216ENST00000620033 ZNF157P51786 506 aaPredicted RBP5.36□□□□□ -1.55
CHL1-216ENST00000620033 ANAPC15P60006 121 aa5.36□□□□□ -1.55
CHL1-216ENST00000620033 SREBF2Q12772 1141 aa5.36□□□□□ -1.55
CHL1-216ENST00000620033 CCDC70Q6NSX1 233 aa5.36□□□□□ -1.55
CHL1-216ENST00000620033 KCNA6P17658 529 aa5.36□□□□□ -1.55
CHL1-216ENST00000620033 TRAF1Q13077 416 aa5.36□□□□□ -1.55
CHL1-216ENST00000620033 MPNDQ8N594 471 aa5.36□□□□□ -1.55
CHL1-216ENST00000620033 MFSD1Q9H3U5 465 aa5.36□□□□□ -1.55
CHL1-216ENST00000620033 HMGXB3Q12766 1538 aa5.36□□□□□ -1.55
CHL1-216ENST00000620033 GTPBP6O43824 516 aaPredicted RBP5.36□□□□□ -1.55
CHL1-216ENST00000620033 ZBED4O75132 1171 aa5.36□□□□□ -1.55
CHL1-216ENST00000620033 SUPT20HL1Q3ZLR7 823 aa5.36□□□□□ -1.55
CHL1-216ENST00000620033 ZMYM3Q14202 1370 aa5.36□□□□□ -1.55
CHL1-216ENST00000620033 RAB3GAP1Q15042 981 aa5.36□□□□□ -1.55
CHL1-216ENST00000620033 ARHGEF10LQ9HCE6 1279 aa5.36□□□□□ -1.55
CHL1-216ENST00000620033 GOPCQ9HD26 462 aa5.36□□□□□ -1.55
CHL1-216ENST00000620033 CEP83Q9Y592 693 aa5.36□□□□□ -1.55
CHL1-216ENST00000620033 CFAP43Q8NDM7 1665 aa5.36□□□□□ -1.55
CHL1-216ENST00000620033 MAST3O60307 1309 aa5.35□□□□□ -1.55
CHL1-216ENST00000620033 HIP1O00291 1037 aa5.35□□□□□ -1.55
CHL1-216ENST00000620033 CFAP70Q5T0N1 1121 aa5.35□□□□□ -1.55
CHL1-216ENST00000620033 CCDC125Q86Z20 511 aa5.35□□□□□ -1.55
CHL1-216ENST00000620033 CCDC61Q9Y6R9 512 aa5.35□□□□□ -1.55
CHL1-216ENST00000620033 ATP2B1P20020 1258 aa5.35□□□□□ -1.55
CHL1-216ENST00000620033 NLGN1Q8N2Q7 840 aa5.35□□□□□ -1.55
CHL1-216ENST00000620033 DDX17Q92841 729 aaKnown RBP5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms