RNA–Protein interactions for RNA: ENST00000619804.1

CPS1-212, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 5 BASIC

Gene CPS1, Length 1,542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-212ENST00000619804 BABAM1Q9NWV8 329 aa8.1□□□□□ -1.11
CPS1-212ENST00000619804 CAMTA1Q9Y6Y1 1673 aa8.1□□□□□ -1.11
CPS1-212ENST00000619804 SLC34A2O95436 690 aa8.09□□□□□ -1.11
CPS1-212ENST00000619804 MLLT3P42568 568 aaPredicted RBP8.09□□□□□ -1.11
CPS1-212ENST00000619804 SLFN5Q08AF3 891 aa8.09□□□□□ -1.11
CPS1-212ENST00000619804 TEFQ10587 303 aa8.09□□□□□ -1.11
CPS1-212ENST00000619804 ZNF530Q6P9A1 599 aaPredicted RBP8.09□□□□□ -1.11
CPS1-212ENST00000619804 IFNL2Q8IZJ0 200 aa8.09□□□□□ -1.11
CPS1-212ENST00000619804 PTCD2Q8WV60 388 aaKnown RBP8.09□□□□□ -1.11
CPS1-212ENST00000619804 ZNF428Q96B54 188 aa8.09□□□□□ -1.11
CPS1-212ENST00000619804 PHACTR3Q96KR7 559 aa8.09□□□□□ -1.11
CPS1-212ENST00000619804 IFT57Q9NWB7 429 aa8.09□□□□□ -1.11
CPS1-212ENST00000619804 CCDC9Q9Y3X0 531 aaKnown RBP8.09□□□□□ -1.11
CPS1-212ENST00000619804 PLCH1Q4KWH8 1693 aa8.09□□□□□ -1.11
CPS1-212ENST00000619804 NCAPD2Q15021 1401 aa8.09□□□□□ -1.11
CPS1-212ENST00000619804 MAP3K5Q99683 1374 aa8.09□□□□□ -1.12
CPS1-212ENST00000619804 ZNF521Q96K83 1311 aa8.09□□□□□ -1.12
CPS1-212ENST00000619804 TBC1D12O60347 775 aa8.08□□□□□ -1.12
CPS1-212ENST00000619804 HSPA1LP34931 641 aa8.08□□□□□ -1.12
CPS1-212ENST00000619804 MTHFSDQ2M296 383 aaKnown RBP8.08□□□□□ -1.12
CPS1-212ENST00000619804 USHBP1Q8N6Y0 703 aa8.08□□□□□ -1.12
CPS1-212ENST00000619804 PCDH11XQ9BZA7 1347 aa8.08□□□□□ -1.12
CPS1-212ENST00000619804 PCDH11YQ9BZA8 1340 aa8.08□□□□□ -1.12
CPS1-212ENST00000619804 UNC5CLQ8IV45 518 aa8.08□□□□□ -1.12
CPS1-212ENST00000619804 SLAIN1Q8ND83 568 aa8.08□□□□□ -1.12
CPS1-212ENST00000619804 ZCRB1Q8TBF4 217 aaKnown RBP8.08□□□□□ -1.12
CPS1-212ENST00000619804 C8orf37Q96NL8 207 aa8.08□□□□□ -1.12
CPS1-212ENST00000619804 LAS1LQ9Y4W2 734 aaKnown RBP8.08□□□□□ -1.12
CPS1-212ENST00000619804 EXOC5O00471 708 aa8.07□□□□□ -1.12
CPS1-212ENST00000619804 MS4A1P11836 297 aa8.07□□□□□ -1.12
CPS1-212ENST00000619804 LARP1Q6PKG0 1096 aaKnown RBP8.07□□□□□ -1.12
CPS1-212ENST00000619804 ERICH6Q7L0X2 663 aa8.07□□□□□ -1.12
CPS1-212ENST00000619804 BCL11AQ9H165 835 aa8.07□□□□□ -1.12
CPS1-212ENST00000619804 USP35Q9P2H5 1018 aa8.07□□□□□ -1.12
CPS1-212ENST00000619804 RCAN3Q9UKA8 241 aa8.07□□□□□ -1.12
CPS1-212ENST00000619804 VIRMAQ69YN4 1812 aaKnown RBP8.07□□□□□ -1.12
CPS1-212ENST00000619804 KAT6BQ8WYB5 2073 aa8.07□□□□□ -1.12
CPS1-212ENST00000619804 OVOS2A0A0G2JMS6 1433 aa8.06□□□□□ -1.12
CPS1-212ENST00000619804 SOS1Q07889 1333 aaPredicted RBP8.06□□□□□ -1.12
CPS1-212ENST00000619804 SENP3-EIF4A1A0A087X0R7 540 aa8.06□□□□□ -1.12
CPS1-212ENST00000619804 TAF7Q15545 349 aaPredicted RBP8.06□□□□□ -1.12
CPS1-212ENST00000619804 DUSP27Q5VZP5 1158 aa8.06□□□□□ -1.12
CPS1-212ENST00000619804 FBXO41Q8TF61 875 aa8.06□□□□□ -1.12
CPS1-212ENST00000619804 DCAF5Q96JK2 942 aa8.06□□□□□ -1.12
CPS1-212ENST00000619804 USP21Q9UK80 565 aa8.06□□□□□ -1.12
CPS1-212ENST00000619804 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.05□□□□□ -1.12
CPS1-212ENST00000619804 EVI5O60447 810 aa8.05□□□□□ -1.12
CPS1-212ENST00000619804 TRMT2AQ8IZ69 625 aaKnown RBP8.05□□□□□ -1.12
CPS1-212ENST00000619804 FNBP4Q8N3X1 1017 aaPredicted RBP8.05□□□□□ -1.12
CPS1-212ENST00000619804 CDCA7LQ96GN5 454 aa8.05□□□□□ -1.12
CPS1-212ENST00000619804 TSPYL4Q9UJ04 414 aa8.05□□□□□ -1.12
CPS1-212ENST00000619804 CACNA1FO60840 1977 aa8.05□□□□□ -1.12
CPS1-212ENST00000619804 PKD1L3Q7Z443 1732 aa8.05□□□□□ -1.12
CPS1-212ENST00000619804 SLIT2O94813 1529 aa8.05□□□□□ -1.12
CPS1-212ENST00000619804 CANXP27824 592 aaKnown RBP8.04□□□□□ -1.12
CPS1-212ENST00000619804 VPS72Q15906 364 aa8.04□□□□□ -1.12
CPS1-212ENST00000619804 DDB1Q16531 1140 aa8.04□□□□□ -1.12
CPS1-212ENST00000619804 BARGINQ6ZT62 677 aa8.04□□□□□ -1.12
CPS1-212ENST00000619804 MCM10Q7L590 875 aa8.04□□□□□ -1.12
CPS1-212ENST00000619804 TRPC5Q9UL62 973 aaPredicted RBP8.04□□□□□ -1.12
CPS1-212ENST00000619804 NRAPQ86VF7 1730 aa8.04□□□□□ -1.12
CPS1-212ENST00000619804 SPATA31A1Q5TZJ5 1347 aa8.04□□□□□ -1.12
CPS1-212ENST00000619804 SCN11AQ9UI33 1791 aa8.04□□□□□ -1.12
CPS1-212ENST00000619804 A0A0G2JS52 829 aa8.03□□□□□ -1.12
CPS1-212ENST00000619804 ERVV-2B6SEH9 535 aa8.03□□□□□ -1.12
CPS1-212ENST00000619804 CHL1O00533 1208 aa8.03□□□□□ -1.12
CPS1-212ENST00000619804 IPO8O15397 1037 aaKnown RBP8.03□□□□□ -1.12
CPS1-212ENST00000619804 RNMTO43148 476 aaKnown RBP8.03□□□□□ -1.12
CPS1-212ENST00000619804 PHKG2P15735 406 aa8.03□□□□□ -1.12
CPS1-212ENST00000619804 HMGB2P26583 209 aaKnown RBP8.03□□□□□ -1.12
CPS1-212ENST00000619804 CABP4P57796 275 aa8.03□□□□□ -1.12
CPS1-212ENST00000619804 ERICH6BQ5W0A0 696 aa8.03□□□□□ -1.12
CPS1-212ENST00000619804 ZNF772Q68DY9 489 aaPredicted RBP8.03□□□□□ -1.12
CPS1-212ENST00000619804 TTC5Q8N0Z6 440 aa8.03□□□□□ -1.12
CPS1-212ENST00000619804 SUPT16HQ9Y5B9 1047 aaKnown RBP8.03□□□□□ -1.12
CPS1-212ENST00000619804 SPATA31A5Q5VU36 1347 aa8.03□□□□□ -1.12
CPS1-212ENST00000619804 SPATA31A7Q8IWB4 1347 aa8.03□□□□□ -1.12
CPS1-212ENST00000619804 FANCIQ9NVI1 1328 aa8.03□□□□□ -1.12
CPS1-212ENST00000619804 GRXCR2A6NFK2 248 aa8.03□□□□□ -1.12
CPS1-212ENST00000619804 BTBD11A6QL63 1104 aa8.03□□□□□ -1.12
CPS1-212ENST00000619804 DOK7Q18PE1 504 aa8.03□□□□□ -1.12
CPS1-212ENST00000619804 ALDH1L2Q3SY69 923 aa8.03□□□□□ -1.12
CPS1-212ENST00000619804 RBM26Q5T8P6 1007 aaKnown RBP8.03□□□□□ -1.12
CPS1-212ENST00000619804 MPRIPQ6WCQ1 1025 aa8.03□□□□□ -1.12
CPS1-212ENST00000619804 DDX54Q8TDD1 881 aaKnown RBP8.03□□□□□ -1.12
CPS1-212ENST00000619804 CHMP4BQ9H444 224 aaKnown RBP8.03□□□□□ -1.12
CPS1-212ENST00000619804 PCDHGA4Q9Y5G9 962 aa8.03□□□□□ -1.12
CPS1-212ENST00000619804 WNK3Q9BYP7 1800 aa8.02□□□□□ -1.13
CPS1-212ENST00000619804 ZNF853P0CG23 659 aa8.02□□□□□ -1.13
CPS1-212ENST00000619804 EXOSC9Q06265 439 aaKnown RBP8.02□□□□□ -1.13
CPS1-212ENST00000619804 DCTN1Q14203 1278 aa8.02□□□□□ -1.13
CPS1-212ENST00000619804 STK31Q9BXU1 1019 aa8.02□□□□□ -1.13
CPS1-212ENST00000619804 MBIPQ9NS73 344 aa8.02□□□□□ -1.13
CPS1-212ENST00000619804 MEGF6O75095 1541 aa8.02□□□□□ -1.13
CPS1-212ENST00000619804 CEMIPQ8WUJ3 1361 aa8.02□□□□□ -1.13
CPS1-212ENST00000619804 AFF2P51816 1311 aa8.01□□□□□ -1.13
CPS1-212ENST00000619804 KIF16BQ96L93 1317 aa8.01□□□□□ -1.13
CPS1-212ENST00000619804 HOXB7P09629 217 aa8.01□□□□□ -1.13
CPS1-212ENST00000619804 PTGER2P43116 358 aa8.01□□□□□ -1.13
CPS1-212ENST00000619804 TWISTNBQ3B726 338 aaPredicted RBP8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms