RNA–Protein interactions for RNA: ENST00000619554.1

NBPF3-213, Transcript of NBPF member 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NBPF3, Length 1,831 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF3-213ENST00000619554 EXOC6Q8TAG9 804 aa13.45□□□□□ -0.26
NBPF3-213ENST00000619554 SLC4A9Q96Q91 983 aa13.45□□□□□ -0.26
NBPF3-213ENST00000619554 LRRC4BQ9NT99 713 aa13.45□□□□□ -0.26
NBPF3-213ENST00000619554 DLG5Q8TDM6 1919 aa13.45□□□□□ -0.26
NBPF3-213ENST00000619554 SOCS7O14512 581 aa13.44□□□□□ -0.26
NBPF3-213ENST00000619554 ITPK1Q13572 414 aa13.44□□□□□ -0.26
NBPF3-213ENST00000619554 KRT24Q2M2I5 525 aa13.44□□□□□ -0.26
NBPF3-213ENST00000619554 C8orf58Q8NAV2 365 aa13.44□□□□□ -0.26
NBPF3-213ENST00000619554 AK7Q96M32 723 aa13.44□□□□□ -0.26
NBPF3-213ENST00000619554 BACH2Q9BYV9 841 aa13.44□□□□□ -0.26
NBPF3-213ENST00000619554 RTL5Q5HYW3 569 aaPredicted RBP13.43□□□□□ -0.26
NBPF3-213ENST00000619554 HDGFL1Q5TGJ6 251 aa13.43□□□□□ -0.26
NBPF3-213ENST00000619554 TRMT2AQ8IZ69 625 aaKnown RBP13.43□□□□□ -0.26
NBPF3-213ENST00000619554 USP16Q9Y5T5 823 aa13.43□□□□□ -0.26
NBPF3-213ENST00000619554 CYP19A1P11511 503 aaPredicted RBP13.43□□□□□ -0.26
NBPF3-213ENST00000619554 PDE4AP27815 886 aa13.43□□□□□ -0.26
NBPF3-213ENST00000619554 LINC00116Q8NCU8 138 aa13.43□□□□□ -0.26
NBPF3-213ENST00000619554 STK32BQ9NY57 414 aa13.43□□□□□ -0.26
NBPF3-213ENST00000619554 BTAF1O14981 1849 aa13.42□□□□□ -0.26
NBPF3-213ENST00000619554 PRAMEF22A3QJZ6 481 aa13.42□□□□□ -0.26
NBPF3-213ENST00000619554 CRKLP46109 303 aaKnown RBP13.42□□□□□ -0.26
NBPF3-213ENST00000619554 CCDC30Q5VVM6 783 aa13.42□□□□□ -0.26
NBPF3-213ENST00000619554 TSPYL6Q8N831 410 aa13.42□□□□□ -0.26
NBPF3-213ENST00000619554 NECTIN2Q92692 538 aa13.42□□□□□ -0.26
NBPF3-213ENST00000619554 CCDC87Q9NVE4 849 aa13.42□□□□□ -0.26
NBPF3-213ENST00000619554 TFCP2L1Q9NZI6 479 aa13.42□□□□□ -0.26
NBPF3-213ENST00000619554 ITGB4P16144 1822 aa13.42□□□□□ -0.26
NBPF3-213ENST00000619554 SBF2Q86WG5 1849 aa13.42□□□□□ -0.26
NBPF3-213ENST00000619554 KCPQ6ZWJ8 1503 aa13.42□□□□□ -0.26
NBPF3-213ENST00000619554 CT47B1P0C2W7 299 aaPredicted RBP13.41□□□□□ -0.26
NBPF3-213ENST00000619554 RC3H1Q5TC82 1133 aaKnown RBP13.41□□□□□ -0.26
NBPF3-213ENST00000619554 STK31Q9BXU1 1019 aa13.41□□□□□ -0.26
NBPF3-213ENST00000619554 GNPATO15228 680 aa13.41□□□□□ -0.26
NBPF3-213ENST00000619554 CANXP27824 592 aaKnown RBP13.41□□□□□ -0.26
NBPF3-213ENST00000619554 RTCBQ9Y3I0 505 aaKnown RBP13.41□□□□□ -0.26
NBPF3-213ENST00000619554 ZNF330Q9Y3S2 320 aaPredicted RBP13.41□□□□□ -0.26
NBPF3-213ENST00000619554 CNTNAP4Q9C0A0 1308 aa13.41□□□□□ -0.26
NBPF3-213ENST00000619554 VAMP4O75379 141 aa13.4□□□□□ -0.26
NBPF3-213ENST00000619554 A1BGP04217 495 aa13.4□□□□□ -0.26
NBPF3-213ENST00000619554 ZNF428Q96B54 188 aa13.4□□□□□ -0.26
NBPF3-213ENST00000619554 DBF4Q9UBU7 674 aaPredicted RBP13.4□□□□□ -0.26
NBPF3-213ENST00000619554 NBR1Q14596 966 aa13.39□□□□□ -0.27
NBPF3-213ENST00000619554 ERBB4Q15303 1308 aa13.39□□□□□ -0.27
NBPF3-213ENST00000619554 MYL6BP14649 208 aa13.39□□□□□ -0.27
NBPF3-213ENST00000619554 INTS5Q6P9B9 1019 aaKnown RBP13.39□□□□□ -0.27
NBPF3-213ENST00000619554 ARXQ96QS3 562 aa13.39□□□□□ -0.27
NBPF3-213ENST00000619554 TNS1Q9HBL0 1735 aaKnown RBP13.38□□□□□ -0.27
NBPF3-213ENST00000619554 SIPA1L3O60292 1781 aaPredicted RBP13.38□□□□□ -0.27
NBPF3-213ENST00000619554 RPS6KA4O75676 772 aa13.38□□□□□ -0.27
NBPF3-213ENST00000619554 PHF14O94880 888 aa13.38□□□□□ -0.27
NBPF3-213ENST00000619554 SLC15A2Q16348 729 aa13.38□□□□□ -0.27
NBPF3-213ENST00000619554 TRAPPC3LQ5T215 181 aa13.38□□□□□ -0.27
NBPF3-213ENST00000619554 FLAD1Q8NFF5 587 aa13.38□□□□□ -0.27
NBPF3-213ENST00000619554 AKT1S1Q96B36 256 aa13.38□□□□□ -0.27
NBPF3-213ENST00000619554 DDRGK1Q96HY6 314 aa13.38□□□□□ -0.27
NBPF3-213ENST00000619554 HYPKQ9NX55 129 aa13.38□□□□□ -0.27
NBPF3-213ENST00000619554 CHPF2Q9P2E5 772 aa13.38□□□□□ -0.27
NBPF3-213ENST00000619554 ZBTB1Q9Y2K1 713 aa13.38□□□□□ -0.27
NBPF3-213ENST00000619554 A0A087WZG4 1122 aa13.37□□□□□ -0.27
NBPF3-213ENST00000619554 IL6STP40189 918 aaPredicted RBP13.37□□□□□ -0.27
NBPF3-213ENST00000619554 DDX21Q9NR30 783 aaKnown RBP eCLIP13.37□□□□□ -0.27
NBPF3-213ENST00000619554 SLC4A2P04920 1241 aa13.36□□□□□ -0.27
NBPF3-213ENST00000619554 ADRA2BP18089 450 aa13.36□□□□□ -0.27
NBPF3-213ENST00000619554 SSFA2P28290 1259 aa13.36□□□□□ -0.27
NBPF3-213ENST00000619554 PIP4K2AP48426 406 aaPredicted RBP13.36□□□□□ -0.27
NBPF3-213ENST00000619554 ZNF827Q17R98 1081 aa13.36□□□□□ -0.27
NBPF3-213ENST00000619554 PAPPAQ13219 1627 aa13.36□□□□□ -0.27
NBPF3-213ENST00000619554 RFC4P35249 363 aa13.36□□□□□ -0.27
NBPF3-213ENST00000619554 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.35□□□□□ -0.27
NBPF3-213ENST00000619554 NBPF26B4DH59 902 aa13.35□□□□□ -0.27
NBPF3-213ENST00000619554 ZPR1O75312 459 aa13.35□□□□□ -0.27
NBPF3-213ENST00000619554 ALDH1L2Q3SY69 923 aa13.35□□□□□ -0.27
NBPF3-213ENST00000619554 NBPF10Q6P3W6 841 aaKnown RBP13.35□□□□□ -0.27
NBPF3-213ENST00000619554 NBPF15Q8N660 670 aa13.35□□□□□ -0.27
NBPF3-213ENST00000619554 ANO8Q9HCE9 1232 aaPredicted RBP13.35□□□□□ -0.27
NBPF3-213ENST00000619554 SMC4Q9NTJ3 1288 aa13.35□□□□□ -0.27
NBPF3-213ENST00000619554 KDM3BQ7LBC6 1761 aa13.35□□□□□ -0.27
NBPF3-213ENST00000619554 EIF5P55010 431 aaKnown RBP13.34□□□□□ -0.27
NBPF3-213ENST00000619554 KIF6Q6ZMV9 814 aa13.34□□□□□ -0.27
NBPF3-213ENST00000619554 ANXA1P04083 346 aa13.34□□□□□ -0.27
NBPF3-213ENST00000619554 AIMP1Q12904 312 aaKnown RBP13.34□□□□□ -0.27
NBPF3-213ENST00000619554 PDIA6Q15084 440 aa13.34□□□□□ -0.27
NBPF3-213ENST00000619554 PROSER3Q2NL68 480 aa13.34□□□□□ -0.27
NBPF3-213ENST00000619554 VIRMAQ69YN4 1812 aaKnown RBP13.33□□□□□ -0.27
NBPF3-213ENST00000619554 RGPD3A6NKT7 1758 aaPredicted RBP13.33□□□□□ -0.27
NBPF3-213ENST00000619554 RGPD4Q7Z3J3 1758 aa13.33□□□□□ -0.27
NBPF3-213ENST00000619554 DDX58O95786 925 aaKnown RBP13.33□□□□□ -0.28
NBPF3-213ENST00000619554 RARSP54136 660 aaKnown RBP13.33□□□□□ -0.28
NBPF3-213ENST00000619554 R3HDM1Q15032 1099 aaKnown RBP13.33□□□□□ -0.28
NBPF3-213ENST00000619554 DZIP3Q86Y13 1208 aaKnown RBP13.33□□□□□ -0.28
NBPF3-213ENST00000619554 SSH1Q8WYL5 1049 aa13.33□□□□□ -0.28
NBPF3-213ENST00000619554 ARHGEF1Q92888 912 aaKnown RBP13.33□□□□□ -0.28
NBPF3-213ENST00000619554 UBR2Q8IWV8 1755 aa13.33□□□□□ -0.28
NBPF3-213ENST00000619554 COPS6Q7L5N1 327 aa13.32□□□□□ -0.28
NBPF3-213ENST00000619554 XAGE3Q8WTP9 111 aa13.32□□□□□ -0.28
NBPF3-213ENST00000619554 BCL2L13Q9BXK5 485 aa13.32□□□□□ -0.28
NBPF3-213ENST00000619554 COL15A1P39059 1388 aa13.32□□□□□ -0.28
NBPF3-213ENST00000619554 LY75O60449 1722 aa13.32□□□□□ -0.28
NBPF3-213ENST00000619554 TBC1D2BQ9UPU7 963 aa13.32□□□□□ -0.28
NBPF3-213ENST00000619554 KDM2BQ8NHM5 1336 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms