RNA–Protein interactions for RNA: ENST00000619530.1

LINC00221-202, long intergenic non-protein coding RNA 221, humanhuman

TSL 2 BASIC

Gene LINC00221, Length 1,499 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00221-202ENST00000619530 SOS1Q07889 1333 aaPredicted RBP20.74■□□□□ 0.91
LINC00221-202ENST00000619530 SIPA1L3O60292 1781 aaPredicted RBP20.74■□□□□ 0.91
LINC00221-202ENST00000619530 UBR2Q8IWV8 1755 aa20.74■□□□□ 0.91
LINC00221-202ENST00000619530 USPL1Q5W0Q7 1092 aa20.74■□□□□ 0.91
LINC00221-202ENST00000619530 TEX13AQ9BXU3 409 aaPredicted RBP20.74■□□□□ 0.91
LINC00221-202ENST00000619530 MIS18AQ9NYP9 233 aa20.74■□□□□ 0.91
LINC00221-202ENST00000619530 MYBBP1AQ9BQG0 1328 aaKnown RBP20.74■□□□□ 0.91
LINC00221-202ENST00000619530 USP42Q9H9J4 1324 aaKnown RBP20.74■□□□□ 0.91
LINC00221-202ENST00000619530 MAPK8IP3Q9UPT6 1336 aa20.74■□□□□ 0.91
LINC00221-202ENST00000619530 HEG1Q9ULI3 1381 aa20.74■□□□□ 0.91
LINC00221-202ENST00000619530 C4AP0C0L4 1744 aa20.73■□□□□ 0.91
LINC00221-202ENST00000619530 ZNF330Q9Y3S2 320 aaPredicted RBP20.73■□□□□ 0.91
LINC00221-202ENST00000619530 CICQ96RK0 1608 aaPredicted RBP20.73■□□□□ 0.91
LINC00221-202ENST00000619530 GRIN3BO60391 1043 aa20.71■□□□□ 0.91
LINC00221-202ENST00000619530 A1BGP04217 495 aa20.71■□□□□ 0.91
LINC00221-202ENST00000619530 TAF7Q15545 349 aaPredicted RBP20.71■□□□□ 0.91
LINC00221-202ENST00000619530 NFE2L2Q16236 605 aa20.71■□□□□ 0.91
LINC00221-202ENST00000619530 UTRNP46939 3433 aa20.71■□□□□ 0.91
LINC00221-202ENST00000619530 COL15A1P39059 1388 aa20.7■□□□□ 0.9
LINC00221-202ENST00000619530 NARFQ9UHQ1 456 aa20.7■□□□□ 0.9
LINC00221-202ENST00000619530 A0A0G2JLW4 131 aa20.69■□□□□ 0.9
LINC00221-202ENST00000619530 THUMPD2Q9BTF0 503 aaKnown RBP20.69■□□□□ 0.9
LINC00221-202ENST00000619530 CHD4Q14839 1912 aa20.69■□□□□ 0.9
LINC00221-202ENST00000619530 PRAMEF22A3QJZ6 481 aa20.69■□□□□ 0.9
LINC00221-202ENST00000619530 DDR1Q08345 913 aa20.69■□□□□ 0.9
LINC00221-202ENST00000619530 DLG5Q8TDM6 1919 aa20.68■□□□□ 0.9
LINC00221-202ENST00000619530 A0A087WZG4 1122 aa20.68■□□□□ 0.9
LINC00221-202ENST00000619530 EIF5P55010 431 aaKnown RBP20.68■□□□□ 0.9
LINC00221-202ENST00000619530 USP16Q9Y5T5 823 aa20.68■□□□□ 0.9
LINC00221-202ENST00000619530 GOLGB1Q14789 3259 aaKnown RBP20.67■□□□□ 0.9
LINC00221-202ENST00000619530 SNRPA1P09661 255 aaKnown RBP20.67■□□□□ 0.9
LINC00221-202ENST00000619530 TM4SF1P30408 202 aa20.67■□□□□ 0.9
LINC00221-202ENST00000619530 PIP4K2AP48426 406 aaPredicted RBP20.67■□□□□ 0.9
LINC00221-202ENST00000619530 NPM2Q86SE8 214 aaKnown RBP20.67■□□□□ 0.9
LINC00221-202ENST00000619530 CCDC146Q8IYE0 955 aa20.67■□□□□ 0.9
LINC00221-202ENST00000619530 TBC1D2BQ9UPU7 963 aa20.67■□□□□ 0.9
LINC00221-202ENST00000619530 WDR43Q15061 677 aaKnown RBP eCLIP20.66■□□□□ 0.9
LINC00221-202ENST00000619530 BICDL1Q6ZP65 573 aa20.66■□□□□ 0.9
LINC00221-202ENST00000619530 PRKRIP1Q9H875 184 aaPredicted RBP20.66■□□□□ 0.9
LINC00221-202ENST00000619530 DPEP1P16444 411 aa20.65■□□□□ 0.9
LINC00221-202ENST00000619530 RIPK4P57078 832 aa20.65■□□□□ 0.9
LINC00221-202ENST00000619530 TGFB2P61812 414 aa20.65■□□□□ 0.9
LINC00221-202ENST00000619530 BCL2L12Q9HB09 334 aa20.65■□□□□ 0.9
LINC00221-202ENST00000619530 POLRMTO00411 1230 aaKnown RBP20.64■□□□□ 0.89
LINC00221-202ENST00000619530 NFIXQ14938 502 aa20.64■□□□□ 0.89
LINC00221-202ENST00000619530 NEUROD2Q15784 382 aa20.64■□□□□ 0.89
LINC00221-202ENST00000619530 RRP7AQ9Y3A4 280 aaKnown RBP20.64■□□□□ 0.89
LINC00221-202ENST00000619530 IL6STP40189 918 aaPredicted RBP20.63■□□□□ 0.89
LINC00221-202ENST00000619530 ZNF784Q8NCA9 323 aaPredicted RBP20.63■□□□□ 0.89
LINC00221-202ENST00000619530 PNISRQ8TF01 805 aaKnown RBP20.63■□□□□ 0.89
LINC00221-202ENST00000619530 N4BP2Q86UW6 1770 aaPredicted RBP20.63■□□□□ 0.89
LINC00221-202ENST00000619530 BCS1LQ9Y276 419 aa20.62■□□□□ 0.89
LINC00221-202ENST00000619530 C10orf71Q711Q0 1435 aa20.62■□□□□ 0.89
LINC00221-202ENST00000619530 TMPOP42166 694 aaKnown RBP20.62■□□□□ 0.89
LINC00221-202ENST00000619530 ADAMTS8Q9UP79 889 aa20.62■□□□□ 0.89
LINC00221-202ENST00000619530 PXDNLA1KZ92 1463 aa20.62■□□□□ 0.89
LINC00221-202ENST00000619530 KIF13BQ9NQT8 1826 aa20.61■□□□□ 0.89
LINC00221-202ENST00000619530 SERPINB2P05120 415 aa20.6■□□□□ 0.89
LINC00221-202ENST00000619530 CHRNA5P30532 468 aa20.59■□□□□ 0.89
LINC00221-202ENST00000619530 TBC1D9BQ66K14 1250 aa20.59■□□□□ 0.89
LINC00221-202ENST00000619530 DZIP3Q86Y13 1208 aaKnown RBP20.59■□□□□ 0.89
LINC00221-202ENST00000619530 RUNDC1Q96C34 613 aa20.59■□□□□ 0.89
LINC00221-202ENST00000619530 NBPF26B4DH59 902 aa20.57■□□□□ 0.88
LINC00221-202ENST00000619530 KCNA3P22001 575 aa20.57■□□□□ 0.88
LINC00221-202ENST00000619530 EIF4A1P60842 406 aaKnown RBP20.57■□□□□ 0.88
LINC00221-202ENST00000619530 NBPF10Q6P3W6 841 aaKnown RBP20.57■□□□□ 0.88
LINC00221-202ENST00000619530 NBPF15Q8N660 670 aa20.57■□□□□ 0.88
LINC00221-202ENST00000619530 PIM2Q9P1W9 311 aa20.57■□□□□ 0.88
LINC00221-202ENST00000619530 TSPYL4Q9UJ04 414 aa20.57■□□□□ 0.88
LINC00221-202ENST00000619530 LMOD3Q0VAK6 560 aa20.56■□□□□ 0.88
LINC00221-202ENST00000619530 ARHGAP27Q6ZUM4 889 aa20.56■□□□□ 0.88
LINC00221-202ENST00000619530 NGEFQ8N5V2 710 aa20.56■□□□□ 0.88
LINC00221-202ENST00000619530 KIAA1551Q9HCM1 1747 aa20.56■□□□□ 0.88
LINC00221-202ENST00000619530 GIGYF1O75420 1035 aaPredicted RBP20.56■□□□□ 0.88
LINC00221-202ENST00000619530 CAMTA2O94983 1202 aa20.56■□□□□ 0.88
LINC00221-202ENST00000619530 AFDNP55196 1824 aaKnown RBP20.55■□□□□ 0.88
LINC00221-202ENST00000619530 CCDC24Q8N4L8 307 aa20.55■□□□□ 0.88
LINC00221-202ENST00000619530 SETDB2Q96T68 719 aa20.55■□□□□ 0.88
LINC00221-202ENST00000619530 LAS1LQ9Y4W2 734 aaKnown RBP20.55■□□□□ 0.88
LINC00221-202ENST00000619530 DALRD3Q5D0E6 543 aaKnown RBP20.54■□□□□ 0.88
LINC00221-202ENST00000619530 YTHDC1Q96MU7 727 aaKnown RBP20.54■□□□□ 0.88
LINC00221-202ENST00000619530 KDM3BQ7LBC6 1761 aa20.53■□□□□ 0.88
LINC00221-202ENST00000619530 NPHP1O15259 732 aa20.53■□□□□ 0.88
LINC00221-202ENST00000619530 MYL6BP14649 208 aa20.51■□□□□ 0.87
LINC00221-202ENST00000619530 C2CD5Q86YS7 1000 aa20.51■□□□□ 0.87
LINC00221-202ENST00000619530 TRIM35Q9UPQ4 493 aa20.51■□□□□ 0.87
LINC00221-202ENST00000619530 EIF2S2P20042 333 aaKnown RBP20.5■□□□□ 0.87
LINC00221-202ENST00000619530 ZNF652Q9Y2D9 606 aa20.5■□□□□ 0.87
LINC00221-202ENST00000619530 H0YIN7 160 aa20.5■□□□□ 0.87
LINC00221-202ENST00000619530 CCDC184Q52MB2 194 aa20.5■□□□□ 0.87
LINC00221-202ENST00000619530 ZNF526Q8TF50 670 aaPredicted RBP20.5■□□□□ 0.87
LINC00221-202ENST00000619530 SCN7AQ01118 1682 aa20.49■□□□□ 0.87
LINC00221-202ENST00000619530 CARMIL3Q8ND23 1372 aa20.49■□□□□ 0.87
LINC00221-202ENST00000619530 PRR5LQ6MZQ0 368 aa20.49■□□□□ 0.87
LINC00221-202ENST00000619530 FAM177BA6PVY3 158 aa20.48■□□□□ 0.87
LINC00221-202ENST00000619530 APAF1O14727 1248 aa20.48■□□□□ 0.87
LINC00221-202ENST00000619530 CLEC4GQ6UXB4 293 aa20.48■□□□□ 0.87
LINC00221-202ENST00000619530 BABAM1Q9NWV8 329 aa20.48■□□□□ 0.87
LINC00221-202ENST00000619530 NRXN2Q9P2S2 1712 aa20.48■□□□□ 0.87
LINC00221-202ENST00000619530 BRCA1P38398 1863 aaKnown RBP20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms