RNA–Protein interactions for RNA: ENST00000619053.1

AP001059.3-201, humanhuman

BASIC

Gene AP001059.3, Length 235 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001059.3-201ENST00000619053 N4BP2Q86UW6 1770 aaPredicted RBP21.72■■□□□ 1.07
AP001059.3-201ENST00000619053 UTRNP46939 3433 aa21.72■■□□□ 1.07
AP001059.3-201ENST00000619053 SRP68Q9UHB9 627 aaKnown RBP21.72■■□□□ 1.07
AP001059.3-201ENST00000619053 BRCA1P38398 1863 aaKnown RBP21.72■■□□□ 1.07
AP001059.3-201ENST00000619053 COL15A1P39059 1388 aa21.72■■□□□ 1.07
AP001059.3-201ENST00000619053 C10orf71Q711Q0 1435 aa21.72■■□□□ 1.07
AP001059.3-201ENST00000619053 AFDNP55196 1824 aaKnown RBP21.71■■□□□ 1.07
AP001059.3-201ENST00000619053 GRIN3BO60391 1043 aa21.71■■□□□ 1.07
AP001059.3-201ENST00000619053 PARP3Q9Y6F1 533 aa21.71■■□□□ 1.07
AP001059.3-201ENST00000619053 KDM3BQ7LBC6 1761 aa21.71■■□□□ 1.07
AP001059.3-201ENST00000619053 ZPR1O75312 459 aa21.7■■□□□ 1.06
AP001059.3-201ENST00000619053 YBX3P16989 372 aaKnown RBP eCLIP21.7■■□□□ 1.06
AP001059.3-201ENST00000619053 NFE2L2Q16236 605 aa21.7■■□□□ 1.06
AP001059.3-201ENST00000619053 PELP1Q8IZL8 1130 aaKnown RBP21.7■■□□□ 1.06
AP001059.3-201ENST00000619053 NARFQ9UHQ1 456 aa21.7■■□□□ 1.06
AP001059.3-201ENST00000619053 KCNQ3O43525 872 aa21.69■■□□□ 1.06
AP001059.3-201ENST00000619053 EIF5P55010 431 aaKnown RBP21.69■■□□□ 1.06
AP001059.3-201ENST00000619053 FKBP8Q14318 412 aa21.69■■□□□ 1.06
AP001059.3-201ENST00000619053 TGFB2P61812 414 aa21.68■■□□□ 1.06
AP001059.3-201ENST00000619053 DCTN1Q14203 1278 aa21.68■■□□□ 1.06
AP001059.3-201ENST00000619053 TAF7Q15545 349 aaPredicted RBP21.68■■□□□ 1.06
AP001059.3-201ENST00000619053 USPL1Q5W0Q7 1092 aa21.68■■□□□ 1.06
AP001059.3-201ENST00000619053 MAPK8IP3Q9UPT6 1336 aa21.68■■□□□ 1.06
AP001059.3-201ENST00000619053 NRXN2Q9P2S2 1712 aa21.68■■□□□ 1.06
AP001059.3-201ENST00000619053 LAMB4A4D0S4 1761 aa21.67■■□□□ 1.06
AP001059.3-201ENST00000619053 SCN7AQ01118 1682 aa21.67■■□□□ 1.06
AP001059.3-201ENST00000619053 PXDNLA1KZ92 1463 aa21.67■■□□□ 1.06
AP001059.3-201ENST00000619053 A0A087WZG4 1122 aa21.67■■□□□ 1.06
AP001059.3-201ENST00000619053 TM4SF1P30408 202 aa21.67■■□□□ 1.06
AP001059.3-201ENST00000619053 CANXP27824 592 aaKnown RBP21.66■■□□□ 1.06
AP001059.3-201ENST00000619053 ARFGEF1Q9Y6D6 1849 aa21.65■■□□□ 1.06
AP001059.3-201ENST00000619053 IL6STP40189 918 aaPredicted RBP21.65■■□□□ 1.06
AP001059.3-201ENST00000619053 DDR1Q08345 913 aa21.65■■□□□ 1.06
AP001059.3-201ENST00000619053 PNISRQ8TF01 805 aaKnown RBP21.65■■□□□ 1.06
AP001059.3-201ENST00000619053 PRKRIP1Q9H875 184 aaPredicted RBP21.65■■□□□ 1.06
AP001059.3-201ENST00000619053 BCORQ6W2J9 1755 aa21.65■■□□□ 1.06
AP001059.3-201ENST00000619053 SNRPA1P09661 255 aaKnown RBP21.64■■□□□ 1.05
AP001059.3-201ENST00000619053 POLRMTO00411 1230 aaKnown RBP21.63■■□□□ 1.05
AP001059.3-201ENST00000619053 BCL2L12Q9HB09 334 aa21.63■■□□□ 1.05
AP001059.3-201ENST00000619053 USP16Q9Y5T5 823 aa21.62■■□□□ 1.05
AP001059.3-201ENST00000619053 A1BGP04217 495 aa21.61■■□□□ 1.05
AP001059.3-201ENST00000619053 NFIXQ14938 502 aa21.6■■□□□ 1.05
AP001059.3-201ENST00000619053 DLEC1Q9Y238 1755 aa21.59■■□□□ 1.05
AP001059.3-201ENST00000619053 NPM2Q86SE8 214 aaKnown RBP21.59■■□□□ 1.05
AP001059.3-201ENST00000619053 ZNF784Q8NCA9 323 aaPredicted RBP21.59■■□□□ 1.05
AP001059.3-201ENST00000619053 A0A0G2JLW4 131 aa21.58■■□□□ 1.05
AP001059.3-201ENST00000619053 PRAMEF22A3QJZ6 481 aa21.58■■□□□ 1.05
AP001059.3-201ENST00000619053 TMPOP42166 694 aaKnown RBP21.58■■□□□ 1.05
AP001059.3-201ENST00000619053 RIPK4P57078 832 aa21.58■■□□□ 1.05
AP001059.3-201ENST00000619053 LMOD3Q0VAK6 560 aa21.58■■□□□ 1.05
AP001059.3-201ENST00000619053 WDR43Q15061 677 aaKnown RBP eCLIP21.58■■□□□ 1.05
AP001059.3-201ENST00000619053 DPEP1P16444 411 aa21.57■■□□□ 1.04
AP001059.3-201ENST00000619053 MIS18AQ9NYP9 233 aa21.57■■□□□ 1.04
AP001059.3-201ENST00000619053 KCNA3P22001 575 aa21.56■■□□□ 1.04
AP001059.3-201ENST00000619053 RUNDC1Q96C34 613 aa21.56■■□□□ 1.04
AP001059.3-201ENST00000619053 THUMPD2Q9BTF0 503 aaKnown RBP21.56■■□□□ 1.04
AP001059.3-201ENST00000619053 BABAM1Q9NWV8 329 aa21.56■■□□□ 1.04
AP001059.3-201ENST00000619053 TBC1D2BQ9UPU7 963 aa21.56■■□□□ 1.04
AP001059.3-201ENST00000619053 ANKRD31Q8N7Z5 1873 aa21.56■■□□□ 1.04
AP001059.3-201ENST00000619053 SERPINB2P05120 415 aa21.55■■□□□ 1.04
AP001059.3-201ENST00000619053 EIF4A1P60842 406 aaKnown RBP21.55■■□□□ 1.04
AP001059.3-201ENST00000619053 ZNF330Q9Y3S2 320 aaPredicted RBP21.55■■□□□ 1.04
AP001059.3-201ENST00000619053 RGL2O15211 777 aa21.54■■□□□ 1.04
AP001059.3-201ENST00000619053 GIGYF1O75420 1035 aaPredicted RBP21.54■■□□□ 1.04
AP001059.3-201ENST00000619053 CAMTA2O94983 1202 aa21.54■■□□□ 1.04
AP001059.3-201ENST00000619053 DZIP3Q86Y13 1208 aaKnown RBP21.54■■□□□ 1.04
AP001059.3-201ENST00000619053 NUP98P52948 1817 aa21.53■■□□□ 1.04
AP001059.3-201ENST00000619053 TBC1D9BQ66K14 1250 aa21.53■■□□□ 1.04
AP001059.3-201ENST00000619053 WWC3Q9ULE0 1092 aa21.53■■□□□ 1.04
AP001059.3-201ENST00000619053 ADAMTS8Q9UP79 889 aa21.53■■□□□ 1.04
AP001059.3-201ENST00000619053 NBPF26B4DH59 902 aa21.52■■□□□ 1.04
AP001059.3-201ENST00000619053 NBPF10Q6P3W6 841 aaKnown RBP21.52■■□□□ 1.04
AP001059.3-201ENST00000619053 CLEC4GQ6UXB4 293 aa21.52■■□□□ 1.04
AP001059.3-201ENST00000619053 NBPF15Q8N660 670 aa21.52■■□□□ 1.04
AP001059.3-201ENST00000619053 PIM2Q9P1W9 311 aa21.52■■□□□ 1.04
AP001059.3-201ENST00000619053 BCS1LQ9Y276 419 aa21.52■■□□□ 1.04
AP001059.3-201ENST00000619053 CARMIL3Q8ND23 1372 aa21.51■■□□□ 1.03
AP001059.3-201ENST00000619053 CCDC146Q8IYE0 955 aa21.51■■□□□ 1.03
AP001059.3-201ENST00000619053 SBF1O95248 1867 aa21.5■■□□□ 1.03
AP001059.3-201ENST00000619053 ZNF316A6NFI3 1004 aaPredicted RBP21.5■■□□□ 1.03
AP001059.3-201ENST00000619053 PIP4K2AP48426 406 aaPredicted RBP21.5■■□□□ 1.03
AP001059.3-201ENST00000619053 BICDL1Q6ZP65 573 aa21.5■■□□□ 1.03
AP001059.3-201ENST00000619053 TSPYL4Q9UJ04 414 aa21.5■■□□□ 1.03
AP001059.3-201ENST00000619053 ADCY9O60503 1353 aa21.49■■□□□ 1.03
AP001059.3-201ENST00000619053 SETDB2Q96T68 719 aa21.49■■□□□ 1.03
AP001059.3-201ENST00000619053 ZNF652Q9Y2D9 606 aa21.49■■□□□ 1.03
AP001059.3-201ENST00000619053 CHRNA5P30532 468 aa21.48■■□□□ 1.03
AP001059.3-201ENST00000619053 DALRD3Q5D0E6 543 aaKnown RBP21.48■■□□□ 1.03
AP001059.3-201ENST00000619053 PDZRN3Q9UPQ7 1066 aa21.48■■□□□ 1.03
AP001059.3-201ENST00000619053 RRP7AQ9Y3A4 280 aaKnown RBP21.48■■□□□ 1.03
AP001059.3-201ENST00000619053 ERBB4Q15303 1308 aa21.48■■□□□ 1.03
AP001059.3-201ENST00000619053 TRIM35Q9UPQ4 493 aa21.47■■□□□ 1.03
AP001059.3-201ENST00000619053 NEUROD2Q15784 382 aa21.46■■□□□ 1.03
AP001059.3-201ENST00000619053 COL11A2P13942 1736 aaPredicted RBP21.46■■□□□ 1.03
AP001059.3-201ENST00000619053 PRR5LQ6MZQ0 368 aa21.45■■□□□ 1.02
AP001059.3-201ENST00000619053 BRIP1Q9BX63 1249 aa21.45■■□□□ 1.02
AP001059.3-201ENST00000619053 ARFGEF2Q9Y6D5 1785 aa21.45■■□□□ 1.02
AP001059.3-201ENST00000619053 ATP10DQ9P241 1426 aa21.45■■□□□ 1.02
AP001059.3-201ENST00000619053 CCDC88AQ3V6T2 1871 aa21.44■■□□□ 1.02
AP001059.3-201ENST00000619053 CHL1O00533 1208 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms