RNA–Protein interactions for RNA: ENST00000618834.1

PCDHA4-204, Transcript of protocadherin alpha 4, humanhuman

BASIC

Gene PCDHA4, Length 10,557 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-204ENST00000618834 SETSIPP0DME0 302 aa13.26□□□□□ -0.29
PCDHA4-204ENST00000618834 CKAP2LQ8IYA6 745 aa13.26□□□□□ -0.29
PCDHA4-204ENST00000618834 PPP2R1AP30153 589 aa13.25□□□□□ -0.29
PCDHA4-204ENST00000618834 SRRTQ9BXP5 876 aaKnown RBP13.25□□□□□ -0.29
PCDHA4-204ENST00000618834 BCAR3O75815 825 aa13.25□□□□□ -0.29
PCDHA4-204ENST00000618834 PRKAR2BP31323 418 aa13.25□□□□□ -0.29
PCDHA4-204ENST00000618834 MPHOSPH8Q99549 860 aa13.25□□□□□ -0.29
PCDHA4-204ENST00000618834 PAIP2Q9BPZ3 127 aaKnown RBP13.25□□□□□ -0.29
PCDHA4-204ENST00000618834 IFI16Q16666 785 aaKnown RBP13.25□□□□□ -0.29
PCDHA4-204ENST00000618834 KLHL34Q8N239 644 aa13.25□□□□□ -0.29
PCDHA4-204ENST00000618834 ERICH3Q5RHP9 1530 aa13.25□□□□□ -0.29
PCDHA4-204ENST00000618834 OPA1O60313 960 aa13.25□□□□□ -0.29
PCDHA4-204ENST00000618834 SWAP70Q9UH65 585 aa13.25□□□□□ -0.29
PCDHA4-204ENST00000618834 CCDC94Q9BW85 323 aaPredicted RBP13.25□□□□□ -0.29
PCDHA4-204ENST00000618834 C8orf76Q96K31 380 aa13.25□□□□□ -0.29
PCDHA4-204ENST00000618834 CABP2Q9NPB3 220 aa13.25□□□□□ -0.29
PCDHA4-204ENST00000618834 SMARCA4P51532 1647 aa13.25□□□□□ -0.29
PCDHA4-204ENST00000618834 HDGFL1Q5TGJ6 251 aa13.25□□□□□ -0.29
PCDHA4-204ENST00000618834 KIF3CO14782 793 aa13.24□□□□□ -0.29
PCDHA4-204ENST00000618834 TTC14Q96N46 770 aa13.24□□□□□ -0.29
PCDHA4-204ENST00000618834 DDX19AQ9NUU7 478 aaKnown RBP13.24□□□□□ -0.29
PCDHA4-204ENST00000618834 WDR63Q8IWG1 891 aa13.24□□□□□ -0.29
PCDHA4-204ENST00000618834 TNPO1Q92973 898 aaKnown RBP13.24□□□□□ -0.29
PCDHA4-204ENST00000618834 FERMT2Q96AC1 680 aa13.24□□□□□ -0.29
PCDHA4-204ENST00000618834 FERMT1Q9BQL6 677 aa13.24□□□□□ -0.29
PCDHA4-204ENST00000618834 CETN1Q12798 172 aa13.24□□□□□ -0.29
PCDHA4-204ENST00000618834 TMEM266Q2M3C6 531 aa13.24□□□□□ -0.29
PCDHA4-204ENST00000618834 RAB34Q9BZG1 259 aa13.24□□□□□ -0.29
PCDHA4-204ENST00000618834 IQCGQ9H095 443 aaKnown RBP13.24□□□□□ -0.29
PCDHA4-204ENST00000618834 CTAGE9A4FU28 777 aa13.24□□□□□ -0.29
PCDHA4-204ENST00000618834 APBB1IPQ7Z5R6 666 aaPredicted RBP13.24□□□□□ -0.29
PCDHA4-204ENST00000618834 NKTRP30414 1462 aaKnown RBP13.24□□□□□ -0.29
PCDHA4-204ENST00000618834 GBP6Q6ZN66 633 aa13.24□□□□□ -0.29
PCDHA4-204ENST00000618834 MIPOL1Q8TD10 442 aa13.24□□□□□ -0.29
PCDHA4-204ENST00000618834 SETD1BQ9UPS6 1966 aaKnown RBP13.23□□□□□ -0.29
PCDHA4-204ENST00000618834 FSIP1Q8NA03 581 aa13.23□□□□□ -0.29
PCDHA4-204ENST00000618834 FERMT3Q86UX7 667 aa13.23□□□□□ -0.29
PCDHA4-204ENST00000618834 MICALL1Q8N3F8 863 aa13.23□□□□□ -0.29
PCDHA4-204ENST00000618834 NOP2P46087 812 aaKnown RBP13.23□□□□□ -0.29
PCDHA4-204ENST00000618834 PLEKHO1Q53GL0 409 aaPredicted RBP13.23□□□□□ -0.29
PCDHA4-204ENST00000618834 MTIF2P46199 727 aaKnown RBP13.23□□□□□ -0.29
PCDHA4-204ENST00000618834 SMC6Q96SB8 1091 aa13.23□□□□□ -0.29
PCDHA4-204ENST00000618834 HECW1Q76N89 1606 aa13.23□□□□□ -0.29
PCDHA4-204ENST00000618834 A0A087WZG4 1122 aa13.23□□□□□ -0.29
PCDHA4-204ENST00000618834 CCDC196A0A1B0GTZ2 297 aa13.23□□□□□ -0.29
PCDHA4-204ENST00000618834 USP5P45974 858 aa13.23□□□□□ -0.29
PCDHA4-204ENST00000618834 GNG11P61952 73 aa13.23□□□□□ -0.29
PCDHA4-204ENST00000618834 CNNM3Q8NE01 707 aa13.23□□□□□ -0.29
PCDHA4-204ENST00000618834 PABPN1LA6NDY0 278 aaKnown RBP13.22□□□□□ -0.29
PCDHA4-204ENST00000618834 SRGAP3O43295 1099 aa13.22□□□□□ -0.29
PCDHA4-204ENST00000618834 ZFYP08048 801 aaPredicted RBP13.22□□□□□ -0.29
PCDHA4-204ENST00000618834 MCM6Q14566 821 aa13.22□□□□□ -0.29
PCDHA4-204ENST00000618834 RAB3IL1Q8TBN0 382 aa13.22□□□□□ -0.29
PCDHA4-204ENST00000618834 KIF5BP33176 963 aa13.22□□□□□ -0.29
PCDHA4-204ENST00000618834 NAA25Q14CX7 972 aa13.22□□□□□ -0.29
PCDHA4-204ENST00000618834 CCDC96Q2M329 555 aa13.22□□□□□ -0.29
PCDHA4-204ENST00000618834 CAPN2P17655 700 aa13.22□□□□□ -0.29
PCDHA4-204ENST00000618834 RBM5P52756 815 aaKnown RBP eCLIP13.22□□□□□ -0.29
PCDHA4-204ENST00000618834 AIDAQ96BJ3 306 aa13.22□□□□□ -0.29
PCDHA4-204ENST00000618834 GGNBP2Q9H3C7 697 aa13.22□□□□□ -0.29
PCDHA4-204ENST00000618834 CCDC129Q6ZRS4 1044 aa13.22□□□□□ -0.29
PCDHA4-204ENST00000618834 ZNF287Q9HBT7 754 aa13.22□□□□□ -0.29
PCDHA4-204ENST00000618834 GOLIM4O00461 696 aa13.21□□□□□ -0.29
PCDHA4-204ENST00000618834 NUTM2GQ5VZR2 741 aa13.21□□□□□ -0.29
PCDHA4-204ENST00000618834 PSMD1Q99460 953 aa13.21□□□□□ -0.29
PCDHA4-204ENST00000618834 EBAG9O00559 213 aa13.21□□□□□ -0.29
PCDHA4-204ENST00000618834 ZBTB16Q05516 673 aa13.21□□□□□ -0.29
PCDHA4-204ENST00000618834 UVSSAQ2YD98 709 aa13.21□□□□□ -0.29
PCDHA4-204ENST00000618834 CPLX3Q8WVH0 158 aa13.21□□□□□ -0.29
PCDHA4-204ENST00000618834 GOLGA1Q92805 767 aa13.21□□□□□ -0.29
PCDHA4-204ENST00000618834 FAM177BA6PVY3 158 aa13.21□□□□□ -0.29
PCDHA4-204ENST00000618834 GPRASP1Q5JY77 1395 aa13.21□□□□□ -0.29
PCDHA4-204ENST00000618834 KIAA0753Q2KHM9 967 aa13.21□□□□□ -0.29
PCDHA4-204ENST00000618834 OTUD6BQ8N6M0 293 aa13.21□□□□□ -0.29
PCDHA4-204ENST00000618834 ZSCAN23Q3MJ62 389 aa13.21□□□□□ -0.3
PCDHA4-204ENST00000618834 PLVAPQ9BX97 442 aa13.21□□□□□ -0.3
PCDHA4-204ENST00000618834 ZSWIM4Q9H7M6 989 aa13.21□□□□□ -0.3
PCDHA4-204ENST00000618834 KIF20AO95235 890 aa13.2□□□□□ -0.3
PCDHA4-204ENST00000618834 SSFA2P28290 1259 aa13.2□□□□□ -0.3
PCDHA4-204ENST00000618834 UBE2HP62256 183 aa13.2□□□□□ -0.3
PCDHA4-204ENST00000618834 TTC12Q9H892 705 aaPredicted RBP13.2□□□□□ -0.3
PCDHA4-204ENST00000618834 ATRIPQ8WXE1 791 aa13.2□□□□□ -0.3
PCDHA4-204ENST00000618834 STAC3Q96MF2 364 aa13.2□□□□□ -0.3
PCDHA4-204ENST00000618834 HMGB1P09429 215 aaKnown RBP13.2□□□□□ -0.3
PCDHA4-204ENST00000618834 SELENOOQ9BVL4 669 aa13.2□□□□□ -0.3
PCDHA4-204ENST00000618834 PYM1Q9BRP8 204 aaKnown RBP13.2□□□□□ -0.3
PCDHA4-204ENST00000618834 SPINK5Q9NQ38 1064 aaPredicted RBP13.2□□□□□ -0.3
PCDHA4-204ENST00000618834 PIP4K2BP78356 416 aa13.2□□□□□ -0.3
PCDHA4-204ENST00000618834 PRPF40BQ6NWY9 871 aaKnown RBP13.2□□□□□ -0.3
PCDHA4-204ENST00000618834 TBC1D5Q92609 795 aa13.2□□□□□ -0.3
PCDHA4-204ENST00000618834 GOLGA8BA8MQT2 603 aa13.2□□□□□ -0.3
PCDHA4-204ENST00000618834 MX1P20591 662 aa13.2□□□□□ -0.3
PCDHA4-204ENST00000618834 TUBB4BP68371 445 aa13.19□□□□□ -0.3
PCDHA4-204ENST00000618834 CFAP58Q5T655 872 aa13.19□□□□□ -0.3
PCDHA4-204ENST00000618834 SSRP1Q08945 709 aaKnown RBP13.19□□□□□ -0.3
PCDHA4-204ENST00000618834 LRP2BPQ9P2M1 347 aa13.19□□□□□ -0.3
PCDHA4-204ENST00000618834 RAB11FIP3O75154 756 aa13.19□□□□□ -0.3
PCDHA4-204ENST00000618834 ACTN2P35609 894 aa13.19□□□□□ -0.3
PCDHA4-204ENST00000618834 SSX2IPQ9Y2D8 614 aa13.19□□□□□ -0.3
PCDHA4-204ENST00000618834 ERBINQ96RT1 1412 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms