RNA–Protein interactions for RNA: ENST00000618785.4

SNX25-207, Transcript of sorting nexin 25, humanhuman

TSL 5 BASIC

Gene SNX25, Length 3,151 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-207ENST00000618785 SLC16A10Q8TF71 515 aa9.26□□□□□ -0.93
SNX25-207ENST00000618785 RTCBQ9Y3I0 505 aaKnown RBP9.26□□□□□ -0.93
SNX25-207ENST00000618785 UBR2Q8IWV8 1755 aa9.26□□□□□ -0.93
SNX25-207ENST00000618785 PNPLA7Q6ZV29 1317 aa9.26□□□□□ -0.93
SNX25-207ENST00000618785 SNRPA1P09661 255 aaKnown RBP9.26□□□□□ -0.93
SNX25-207ENST00000618785 CRKLP46109 303 aaKnown RBP9.26□□□□□ -0.93
SNX25-207ENST00000618785 CCDC87Q9NVE4 849 aa9.26□□□□□ -0.93
SNX25-207ENST00000618785 MSH5O43196 834 aa9.25□□□□□ -0.93
SNX25-207ENST00000618785 RPS6KA4O75676 772 aa9.25□□□□□ -0.93
SNX25-207ENST00000618785 CYP19A1P11511 503 aaPredicted RBP9.25□□□□□ -0.93
SNX25-207ENST00000618785 LAS1LQ9Y4W2 734 aaKnown RBP9.25□□□□□ -0.93
SNX25-207ENST00000618785 TJP1Q07157 1748 aa9.25□□□□□ -0.93
SNX25-207ENST00000618785 CHL1O00533 1208 aa9.25□□□□□ -0.93
SNX25-207ENST00000618785 ADRA2BP18089 450 aa9.25□□□□□ -0.93
SNX25-207ENST00000618785 GNAI1P63096 354 aa9.25□□□□□ -0.93
SNX25-207ENST00000618785 CFAP44Q96MT7 982 aa9.25□□□□□ -0.93
SNX25-207ENST00000618785 QSER1Q2KHR3 1735 aa9.25□□□□□ -0.93
SNX25-207ENST00000618785 EIF4A1P60842 406 aaKnown RBP9.24□□□□□ -0.93
SNX25-207ENST00000618785 SYT17Q9BSW7 474 aa9.24□□□□□ -0.93
SNX25-207ENST00000618785 IFT57Q9NWB7 429 aa9.24□□□□□ -0.93
SNX25-207ENST00000618785 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.24□□□□□ -0.93
SNX25-207ENST00000618785 COL23A1Q86Y22 540 aaPredicted RBP9.24□□□□□ -0.93
SNX25-207ENST00000618785 WWC1Q8IX03 1113 aa9.24□□□□□ -0.93
SNX25-207ENST00000618785 ARXQ96QS3 562 aa9.24□□□□□ -0.93
SNX25-207ENST00000618785 COL5A3P25940 1745 aaPredicted RBP9.24□□□□□ -0.93
SNX25-207ENST00000618785 KDM3BQ7LBC6 1761 aa9.24□□□□□ -0.93
SNX25-207ENST00000618785 PHF14O94880 888 aa9.24□□□□□ -0.93
SNX25-207ENST00000618785 TRAPPC3LQ5T215 181 aa9.24□□□□□ -0.93
SNX25-207ENST00000618785 INTS5Q6P9B9 1019 aaKnown RBP9.24□□□□□ -0.93
SNX25-207ENST00000618785 MTFR1LQ9H019 292 aa9.24□□□□□ -0.93
SNX25-207ENST00000618785 IL16Q14005 1332 aa9.23□□□□□ -0.93
SNX25-207ENST00000618785 CASZ1Q86V15 1759 aa9.23□□□□□ -0.93
SNX25-207ENST00000618785 ZNF853P0CG23 659 aa9.23□□□□□ -0.93
SNX25-207ENST00000618785 PDGFDQ9GZP0 370 aaPredicted RBP9.23□□□□□ -0.93
SNX25-207ENST00000618785 SALL2Q9Y467 1007 aaPredicted RBP9.23□□□□□ -0.93
SNX25-207ENST00000618785 ZBTB7AO95365 584 aa9.22□□□□□ -0.93
SNX25-207ENST00000618785 NPM2Q86SE8 214 aaKnown RBP9.22□□□□□ -0.93
SNX25-207ENST00000618785 WDR63Q8IWG1 891 aa9.22□□□□□ -0.93
SNX25-207ENST00000618785 ZBTB1Q9Y2K1 713 aa9.22□□□□□ -0.93
SNX25-207ENST00000618785 USP16Q9Y5T5 823 aa9.22□□□□□ -0.93
SNX25-207ENST00000618785 SOS1Q07889 1333 aaPredicted RBP9.22□□□□□ -0.93
SNX25-207ENST00000618785 A0A087WZG4 1122 aa9.22□□□□□ -0.93
SNX25-207ENST00000618785 CANXP27824 592 aaKnown RBP9.22□□□□□ -0.93
SNX25-207ENST00000618785 RFC4P35249 363 aa9.22□□□□□ -0.93
SNX25-207ENST00000618785 UBR3Q6ZT12 1888 aa9.22□□□□□ -0.93
SNX25-207ENST00000618785 JMYQ8N9B5 988 aa9.22□□□□□ -0.93
SNX25-207ENST00000618785 TUBGCP6Q96RT7 1819 aa9.22□□□□□ -0.93
SNX25-207ENST00000618785 IL6STP40189 918 aaPredicted RBP9.21□□□□□ -0.93
SNX25-207ENST00000618785 AMIGO3Q86WK7 504 aa9.21□□□□□ -0.93
SNX25-207ENST00000618785 ARHGEF1Q92888 912 aaKnown RBP9.21□□□□□ -0.93
SNX25-207ENST00000618785 MBIPQ9NS73 344 aa9.21□□□□□ -0.93
SNX25-207ENST00000618785 ATF5Q9Y2D1 282 aaPredicted RBP9.21□□□□□ -0.93
SNX25-207ENST00000618785 PRAMEF22A3QJZ6 481 aa9.21□□□□□ -0.94
SNX25-207ENST00000618785 GPR162Q16538 588 aa9.21□□□□□ -0.94
SNX25-207ENST00000618785 WWC3Q9ULE0 1092 aa9.21□□□□□ -0.94
SNX25-207ENST00000618785 A1BGP04217 495 aa9.2□□□□□ -0.94
SNX25-207ENST00000618785 HOXB7P09629 217 aa9.2□□□□□ -0.94
SNX25-207ENST00000618785 POLD1P28340 1107 aa9.2□□□□□ -0.94
SNX25-207ENST00000618785 SMIM5Q71RC9 77 aa9.2□□□□□ -0.94
SNX25-207ENST00000618785 COL15A1P39059 1388 aa9.2□□□□□ -0.94
SNX25-207ENST00000618785 ERBB4Q15303 1308 aa9.2□□□□□ -0.94
SNX25-207ENST00000618785 EIF5P55010 431 aaKnown RBP9.2□□□□□ -0.94
SNX25-207ENST00000618785 DNAJC5GQ8N7S2 189 aa9.2□□□□□ -0.94
SNX25-207ENST00000618785 FHDC1Q9C0D6 1143 aaPredicted RBP9.2□□□□□ -0.94
SNX25-207ENST00000618785 MYH14Q7Z406 1995 aaKnown RBP9.2□□□□□ -0.94
SNX25-207ENST00000618785 CHMP4AQ9BY43 222 aa9.2□□□□□ -0.94
SNX25-207ENST00000618785 ZPR1O75312 459 aa9.19□□□□□ -0.94
SNX25-207ENST00000618785 NLGN1Q8N2Q7 840 aa9.19□□□□□ -0.94
SNX25-207ENST00000618785 ZNF330Q9Y3S2 320 aaPredicted RBP9.19□□□□□ -0.94
SNX25-207ENST00000618785 MYH16Q9H6N6 1097 aa9.19□□□□□ -0.94
SNX25-207ENST00000618785 GPBP1L1Q9HC44 474 aaPredicted RBP9.19□□□□□ -0.94
SNX25-207ENST00000618785 LAMB4A4D0S4 1761 aa9.19□□□□□ -0.94
SNX25-207ENST00000618785 USP42Q9H9J4 1324 aaKnown RBP9.19□□□□□ -0.94
SNX25-207ENST00000618785 GRIN3BO60391 1043 aa9.18□□□□□ -0.94
SNX25-207ENST00000618785 EIF2S2P20042 333 aaKnown RBP9.18□□□□□ -0.94
SNX25-207ENST00000618785 DUSP27Q5VZP5 1158 aa9.18□□□□□ -0.94
SNX25-207ENST00000618785 NARFQ9UHQ1 456 aa9.18□□□□□ -0.94
SNX25-207ENST00000618785 PTGER2P43116 358 aa9.18□□□□□ -0.94
SNX25-207ENST00000618785 MSL1Q68DK7 614 aa9.18□□□□□ -0.94
SNX25-207ENST00000618785 NBPF26B4DH59 902 aa9.18□□□□□ -0.94
SNX25-207ENST00000618785 GYS1P13807 737 aa9.18□□□□□ -0.94
SNX25-207ENST00000618785 GOLGA2Q08379 1002 aa9.18□□□□□ -0.94
SNX25-207ENST00000618785 KRT24Q2M2I5 525 aa9.18□□□□□ -0.94
SNX25-207ENST00000618785 HDGFL1Q5TGJ6 251 aa9.18□□□□□ -0.94
SNX25-207ENST00000618785 NBPF10Q6P3W6 841 aaKnown RBP9.18□□□□□ -0.94
SNX25-207ENST00000618785 NBPF15Q8N660 670 aa9.18□□□□□ -0.94
SNX25-207ENST00000618785 ZNF521Q96K83 1311 aa9.17□□□□□ -0.94
SNX25-207ENST00000618785 ATP10DQ9P241 1426 aa9.17□□□□□ -0.94
SNX25-207ENST00000618785 TSR2Q969E8 191 aaKnown RBP9.17□□□□□ -0.94
SNX25-207ENST00000618785 SGIP1Q9BQI5 828 aa9.17□□□□□ -0.94
SNX25-207ENST00000618785 SRP68Q9UHB9 627 aaKnown RBP9.17□□□□□ -0.94
SNX25-207ENST00000618785 PIP4K2AP48426 406 aaPredicted RBP9.17□□□□□ -0.94
SNX25-207ENST00000618785 USPL1Q5W0Q7 1092 aa9.17□□□□□ -0.94
SNX25-207ENST00000618785 DZIP3Q86Y13 1208 aaKnown RBP9.17□□□□□ -0.94
SNX25-207ENST00000618785 FANCIQ9NVI1 1328 aa9.17□□□□□ -0.94
SNX25-207ENST00000618785 C8orf58Q8NAV2 365 aa9.16□□□□□ -0.94
SNX25-207ENST00000618785 TBC1D2BQ9UPU7 963 aa9.16□□□□□ -0.94
SNX25-207ENST00000618785 C4AP0C0L4 1744 aa9.16□□□□□ -0.94
SNX25-207ENST00000618785 E9PSI1 815 aa9.16□□□□□ -0.94
SNX25-207ENST00000618785 ELL2O00472 640 aaPredicted RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms