RNA–Protein interactions for RNA: ENST00000618621.4

LPP-221, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 1 (best) BASIC

Gene LPP, Length 18,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-221ENST00000618621 EPB41L2O43491 1005 aaKnown RBP3.56□□□□□ -1.84
LPP-221ENST00000618621 HSPA2P54652 639 aa3.56□□□□□ -1.84
LPP-221ENST00000618621 MAP9Q49MG5 647 aa3.56□□□□□ -1.84
LPP-221ENST00000618621 CCDC191Q8NCU4 936 aa3.56□□□□□ -1.84
LPP-221ENST00000618621 INSRP06213 1382 aa3.56□□□□□ -1.84
LPP-221ENST00000618621 CCDC196A0A1B0GTZ2 297 aa3.56□□□□□ -1.84
LPP-221ENST00000618621 KIAA0754O94854 1291 aa3.56□□□□□ -1.84
LPP-221ENST00000618621 SFPQP23246 707 aaKnown RBP eCLIP3.56□□□□□ -1.842e-6■■■■□ 26
LPP-221ENST00000618621 DNAJC2Q99543 621 aaKnown RBP3.56□□□□□ -1.84
LPP-221ENST00000618621 SPATA31E1Q6ZUB1 1445 aa3.56□□□□□ -1.84
LPP-221ENST00000618621 GBP3Q9H0R5 595 aa3.56□□□□□ -1.84
LPP-221ENST00000618621 KANK3Q6NY19 840 aa3.56□□□□□ -1.84
LPP-221ENST00000618621 MRPL50Q8N5N7 158 aaKnown RBP3.56□□□□□ -1.84
LPP-221ENST00000618621 KIAA0586Q9BVV6 1533 aa3.56□□□□□ -1.84
LPP-221ENST00000618621 CAMK4Q16566 473 aa3.56□□□□□ -1.84
LPP-221ENST00000618621 MIS18AQ9NYP9 233 aa3.56□□□□□ -1.84
LPP-221ENST00000618621 TCEAL9Q9UHQ7 104 aa3.56□□□□□ -1.84
LPP-221ENST00000618621 STX1AQ16623 288 aa3.56□□□□□ -1.84
LPP-221ENST00000618621 LMBRD1Q9NUN5 540 aa3.56□□□□□ -1.84
LPP-221ENST00000618621 DMRT2Q9Y5R5 561 aa3.56□□□□□ -1.84
LPP-221ENST00000618621 TROQ12816 1431 aaPredicted RBP3.56□□□□□ -1.84
LPP-221ENST00000618621 TTC39AQ5SRH9 613 aa3.56□□□□□ -1.84
LPP-221ENST00000618621 ZKSCAN5Q9Y2L8 839 aa3.56□□□□□ -1.84
LPP-221ENST00000618621 SPDYE4A6NLX3 237 aa3.56□□□□□ -1.84
LPP-221ENST00000618621 SRRTQ9BXP5 876 aaKnown RBP3.56□□□□□ -1.84
LPP-221ENST00000618621 TFIP11Q9UBB9 837 aaKnown RBP3.56□□□□□ -1.84
LPP-221ENST00000618621 MX1P20591 662 aa3.56□□□□□ -1.84
LPP-221ENST00000618621 CABP4P57796 275 aa3.56□□□□□ -1.84
LPP-221ENST00000618621 PRPF40BQ6NWY9 871 aaKnown RBP3.56□□□□□ -1.84
LPP-221ENST00000618621 DDX11Q96FC9 970 aa3.56□□□□□ -1.84
LPP-221ENST00000618621 HYPKQ9NX55 129 aa3.56□□□□□ -1.84
LPP-221ENST00000618621 PTPRCP08575 1304 aa3.56□□□□□ -1.84
LPP-221ENST00000618621 CCDC69A6NI79 296 aa3.56□□□□□ -1.84
LPP-221ENST00000618621 USP8P40818 1118 aa3.56□□□□□ -1.84
LPP-221ENST00000618621 GDPD2Q9HCC8 539 aa3.56□□□□□ -1.84
LPP-221ENST00000618621 HMG20BQ9P0W2 317 aa3.56□□□□□ -1.84
LPP-221ENST00000618621 ABCC11Q96J66 1382 aa3.56□□□□□ -1.84
LPP-221ENST00000618621 GNAT3A8MTJ3 354 aa3.56□□□□□ -1.84
LPP-221ENST00000618621 FILIP1Q7Z7B0 1213 aa3.56□□□□□ -1.84
LPP-221ENST00000618621 AKAP2Q9Y2D5 859 aa3.56□□□□□ -1.84
LPP-221ENST00000618621 KIF5CO60282 957 aa3.56□□□□□ -1.84
LPP-221ENST00000618621 CEP135Q66GS9 1140 aa3.56□□□□□ -1.84
LPP-221ENST00000618621 YEATS4O95619 227 aa3.56□□□□□ -1.84
LPP-221ENST00000618621 STK3Q13188 491 aa3.56□□□□□ -1.84
LPP-221ENST00000618621 ODF2Q5BJF6 829 aa3.56□□□□□ -1.84
LPP-221ENST00000618621 FMNL2Q96PY5 1086 aa3.56□□□□□ -1.84
LPP-221ENST00000618621 SPG7Q9UQ90 795 aa3.56□□□□□ -1.84
LPP-221ENST00000618621 H0YHG0 523 aa3.55□□□□□ -1.84
LPP-221ENST00000618621 FOXO3O43524 673 aa3.55□□□□□ -1.84
LPP-221ENST00000618621 BMS1Q14692 1282 aaKnown RBP3.55□□□□□ -1.84
LPP-221ENST00000618621 TTC22Q5TAA0 569 aa3.55□□□□□ -1.84
LPP-221ENST00000618621 C9orf84Q5VXU9 1444 aa3.55□□□□□ -1.84
LPP-221ENST00000618621 SPA17Q15506 151 aa3.55□□□□□ -1.84
LPP-221ENST00000618621 PLEKHM2Q8IWE5 1019 aa3.55□□□□□ -1.84
LPP-221ENST00000618621 C17orf53Q8N3J3 647 aaPredicted RBP3.55□□□□□ -1.84
LPP-221ENST00000618621 TUBBP07437 444 aa3.55□□□□□ -1.84
LPP-221ENST00000618621 TNNT1P13805 278 aa3.55□□□□□ -1.84
LPP-221ENST00000618621 TTLL5Q6EMB2 1281 aa3.55□□□□□ -1.84
LPP-221ENST00000618621 USHBP1Q8N6Y0 703 aa3.55□□□□□ -1.84
LPP-221ENST00000618621 PYM1Q9BRP8 204 aaKnown RBP3.55□□□□□ -1.84
LPP-221ENST00000618621 NUTM1Q86Y26 1132 aa3.55□□□□□ -1.84
LPP-221ENST00000618621 SMAP1Q8IYB5 467 aaPredicted RBP3.55□□□□□ -1.84
LPP-221ENST00000618621 CCDC94Q9BW85 323 aaPredicted RBP3.55□□□□□ -1.84
LPP-221ENST00000618621 LMNB1P20700 586 aa3.55□□□□□ -1.84
LPP-221ENST00000618621 HSP90AB2PQ58FF8 381 aa3.55□□□□□ -1.84
LPP-221ENST00000618621 KIF6Q6ZMV9 814 aa3.55□□□□□ -1.84
LPP-221ENST00000618621 CCAR1Q8IX12 1150 aaKnown RBP3.55□□□□□ -1.84
LPP-221ENST00000618621 STX6O43752 255 aa3.55□□□□□ -1.84
LPP-221ENST00000618621 CT47A1Q5JQC4 288 aaPredicted RBP3.55□□□□□ -1.84
LPP-221ENST00000618621 KCNG1Q9UIX4 513 aa3.55□□□□□ -1.84
LPP-221ENST00000618621 GIMAP6Q6P9H5 292 aa3.55□□□□□ -1.84
LPP-221ENST00000618621 LARP1Q6PKG0 1096 aaKnown RBP3.55□□□□□ -1.84
LPP-221ENST00000618621 ZSCAN16Q9H4T2 348 aaPredicted RBP3.55□□□□□ -1.84
LPP-221ENST00000618621 ZRANB1Q9UGI0 708 aa3.55□□□□□ -1.84
LPP-221ENST00000618621 ZNF500O60304 480 aaPredicted RBP3.55□□□□□ -1.84
LPP-221ENST00000618621 MICALCLQ6ZW33 695 aa3.55□□□□□ -1.84
LPP-221ENST00000618621 BOLA2Q9H3K6 86 aa3.55□□□□□ -1.84
LPP-221ENST00000618621 GOLGA6L9A6NEM1 432 aa3.55□□□□□ -1.84
LPP-221ENST00000618621 HMGB2P26583 209 aaKnown RBP3.55□□□□□ -1.84
LPP-221ENST00000618621 POLR3GO15318 223 aaPredicted RBP3.55□□□□□ -1.84
LPP-221ENST00000618621 KIF4BQ2VIQ3 1234 aa3.55□□□□□ -1.84
LPP-221ENST00000618621 DCTPP1Q9H773 170 aa3.55□□□□□ -1.84
LPP-221ENST00000618621 CLIP2Q9UDT6 1046 aa3.55□□□□□ -1.84
LPP-221ENST00000618621 TNNQ9UQP3 1299 aa3.55□□□□□ -1.84
LPP-221ENST00000618621 USO1O60763 962 aaKnown RBP3.55□□□□□ -1.84
LPP-221ENST00000618621 SOGA3Q5TF21 947 aa3.55□□□□□ -1.84
LPP-221ENST00000618621 CCDC102BQ68D86 513 aa3.55□□□□□ -1.84
LPP-221ENST00000618621 TMTC2Q8N394 836 aa3.55□□□□□ -1.84
LPP-221ENST00000618621 INTS4Q96HW7 963 aaKnown RBP3.55□□□□□ -1.84
LPP-221ENST00000618621 TIGD1Q96MW7 591 aa3.55□□□□□ -1.84
LPP-221ENST00000618621 C14orf93Q9H972 538 aaKnown RBP3.55□□□□□ -1.84
LPP-221ENST00000618621 GOLGA4Q13439 2230 aaKnown RBP3.55□□□□□ -1.84
LPP-221ENST00000618621 NUP133Q8WUM0 1156 aa3.55□□□□□ -1.84
LPP-221ENST00000618621 TTC12Q9H892 705 aaPredicted RBP3.55□□□□□ -1.84
LPP-221ENST00000618621 FKBP4Q02790 459 aaKnown RBP eCLIP3.55□□□□□ -1.84
LPP-221ENST00000618621 TUBB2AQ13885 445 aa3.55□□□□□ -1.84
LPP-221ENST00000618621 NME9Q86XW9 330 aa3.55□□□□□ -1.84
LPP-221ENST00000618621 TUBB2BQ9BVA1 445 aa3.55□□□□□ -1.84
LPP-221ENST00000618621 WWC2Q6AWC2 1192 aa3.54□□□□□ -1.84
LPP-221ENST00000618621 TRMT1Q9NXH9 659 aaKnown RBP3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms