RNA–Protein interactions for RNA: ENST00000618538.1

SEC22B-202, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

TSL 3

Gene SEC22B, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-202ENST00000618538 TNRQ92752 1358 aa5.41□□□□□ -1.54
SEC22B-202ENST00000618538 CEP170BQ9Y4F5 1589 aaPredicted RBP5.41□□□□□ -1.54
SEC22B-202ENST00000618538 FMN2Q9NZ56 1722 aa5.4□□□□□ -1.54
SEC22B-202ENST00000618538 MARF1Q9Y4F3 1742 aaKnown RBP5.4□□□□□ -1.54
SEC22B-202ENST00000618538 USP31Q70CQ4 1352 aa5.4□□□□□ -1.54
SEC22B-202ENST00000618538 PTPREP23469 700 aa5.4□□□□□ -1.54
SEC22B-202ENST00000618538 PLEKHM2Q8IWE5 1019 aa5.4□□□□□ -1.54
SEC22B-202ENST00000618538 SNX21Q969T3 373 aa5.4□□□□□ -1.54
SEC22B-202ENST00000618538 GCC1Q96CN9 775 aa5.4□□□□□ -1.54
SEC22B-202ENST00000618538 SIRT1Q96EB6 747 aa5.4□□□□□ -1.54
SEC22B-202ENST00000618538 CHMP5Q9NZZ3 219 aa5.4□□□□□ -1.54
SEC22B-202ENST00000618538 RTL1A6NKG5 1358 aa5.4□□□□□ -1.55
SEC22B-202ENST00000618538 MAP3K19Q56UN5 1328 aa5.4□□□□□ -1.55
SEC22B-202ENST00000618538 CHL1O00533 1208 aa5.4□□□□□ -1.55
SEC22B-202ENST00000618538 XRCC6P12956 609 aaKnown RBP eCLIP5.4□□□□□ -1.55
SEC22B-202ENST00000618538 FOXK1P85037 733 aa5.4□□□□□ -1.55
SEC22B-202ENST00000618538 KCNC4Q03721 635 aa5.4□□□□□ -1.55
SEC22B-202ENST00000618538 INTS3Q68E01 1043 aaKnown RBP5.4□□□□□ -1.55
SEC22B-202ENST00000618538 ANKK1Q8NFD2 765 aa5.4□□□□□ -1.55
SEC22B-202ENST00000618538 GZF1Q9H116 711 aaPredicted RBP5.4□□□□□ -1.55
SEC22B-202ENST00000618538 RGPD8O14715 1765 aaPredicted RBP5.4□□□□□ -1.55
SEC22B-202ENST00000618538 PIK3C2AO00443 1686 aa5.4□□□□□ -1.55
SEC22B-202ENST00000618538 LRRC37A3O60309 1634 aa5.4□□□□□ -1.55
SEC22B-202ENST00000618538 HAP1P54257 671 aaPredicted RBP5.39□□□□□ -1.55
SEC22B-202ENST00000618538 CALD1Q05682 793 aaKnown RBP5.39□□□□□ -1.55
SEC22B-202ENST00000618538 CEP85Q6P2H3 762 aa5.39□□□□□ -1.55
SEC22B-202ENST00000618538 G2E3Q7L622 706 aa5.39□□□□□ -1.55
SEC22B-202ENST00000618538 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.39□□□□□ -1.55
SEC22B-202ENST00000618538 GAS2L2Q8NHY3 880 aa5.39□□□□□ -1.55
SEC22B-202ENST00000618538 ARXQ96QS3 562 aa5.39□□□□□ -1.55
SEC22B-202ENST00000618538 MEIS3Q99687 375 aa5.39□□□□□ -1.55
SEC22B-202ENST00000618538 MFRPQ9BY79 579 aa5.39□□□□□ -1.55
SEC22B-202ENST00000618538 RRAGDQ9NQL2 400 aaPredicted RBP5.39□□□□□ -1.55
SEC22B-202ENST00000618538 MIS18AQ9NYP9 233 aa5.39□□□□□ -1.55
SEC22B-202ENST00000618538 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.39□□□□□ -1.55
SEC22B-202ENST00000618538 NWD1Q149M9 1564 aa5.39□□□□□ -1.55
SEC22B-202ENST00000618538 KIF24Q5T7B8 1368 aa5.39□□□□□ -1.55
SEC22B-202ENST00000618538 PLEKHG1Q9ULL1 1385 aa5.39□□□□□ -1.55
SEC22B-202ENST00000618538 PLEKHG3A1L390 1219 aa5.39□□□□□ -1.55
SEC22B-202ENST00000618538 SMARCA5O60264 1052 aaPredicted RBP5.39□□□□□ -1.55
SEC22B-202ENST00000618538 LAPTM4BQ86VI4 370 aa5.39□□□□□ -1.55
SEC22B-202ENST00000618538 HSCBQ8IWL3 235 aa5.39□□□□□ -1.55
SEC22B-202ENST00000618538 TNPO1Q92973 898 aaKnown RBP5.39□□□□□ -1.55
SEC22B-202ENST00000618538 API5Q9BZZ5 524 aaKnown RBP5.39□□□□□ -1.55
SEC22B-202ENST00000618538 DCTPP1Q9H773 170 aa5.39□□□□□ -1.55
SEC22B-202ENST00000618538 KIAA0232Q92628 1395 aa5.38□□□□□ -1.55
SEC22B-202ENST00000618538 FAM208AQ9UK61 1670 aaKnown RBP5.38□□□□□ -1.55
SEC22B-202ENST00000618538 DIP2AQ14689 1571 aa5.38□□□□□ -1.55
SEC22B-202ENST00000618538 TRAK2O60296 914 aa5.38□□□□□ -1.55
SEC22B-202ENST00000618538 GFRA3O60609 400 aa5.38□□□□□ -1.55
SEC22B-202ENST00000618538 CEBPAP49715 358 aaPredicted RBP5.38□□□□□ -1.55
SEC22B-202ENST00000618538 LMOD3Q0VAK6 560 aa5.38□□□□□ -1.55
SEC22B-202ENST00000618538 ANKRD44Q8N8A2 993 aa5.38□□□□□ -1.55
SEC22B-202ENST00000618538 SLC26A8Q96RN1 970 aa5.38□□□□□ -1.55
SEC22B-202ENST00000618538 ZBED2Q9BTP6 218 aa5.38□□□□□ -1.55
SEC22B-202ENST00000618538 TUBGCP6Q96RT7 1819 aa5.38□□□□□ -1.55
SEC22B-202ENST00000618538 KDRP35968 1356 aa5.38□□□□□ -1.55
SEC22B-202ENST00000618538 RAB3GAP1Q15042 981 aa5.38□□□□□ -1.55
SEC22B-202ENST00000618538 MTHFSDQ2M296 383 aaKnown RBP5.38□□□□□ -1.55
SEC22B-202ENST00000618538 TTC22Q5TAA0 569 aa5.38□□□□□ -1.55
SEC22B-202ENST00000618538 GAS2L3Q86XJ1 694 aa5.38□□□□□ -1.55
SEC22B-202ENST00000618538 XRN1Q8IZH2 1706 aaKnown RBP5.37□□□□□ -1.55
SEC22B-202ENST00000618538 ARHGEF10O15013 1369 aa5.37□□□□□ -1.55
SEC22B-202ENST00000618538 ARHGAP23Q9P227 1491 aa5.37□□□□□ -1.55
SEC22B-202ENST00000618538 F6X3S4 739 aa5.37□□□□□ -1.55
SEC22B-202ENST00000618538 CDC45O75419 566 aa5.37□□□□□ -1.55
SEC22B-202ENST00000618538 SSFA2P28290 1259 aa5.37□□□□□ -1.55
SEC22B-202ENST00000618538 FAM43AQ8N2R8 423 aa5.37□□□□□ -1.55
SEC22B-202ENST00000618538 BCL11BQ9C0K0 894 aaPredicted RBP5.37□□□□□ -1.55
SEC22B-202ENST00000618538 AK9Q5TCS8 1911 aa5.37□□□□□ -1.55
SEC22B-202ENST00000618538 IGSF1Q8N6C5 1336 aa5.37□□□□□ -1.55
SEC22B-202ENST00000618538 K7ELQ4 463 aaPredicted RBP5.36□□□□□ -1.55
SEC22B-202ENST00000618538 APBB1O00213 710 aa5.36□□□□□ -1.55
SEC22B-202ENST00000618538 SDSP20132 328 aa5.36□□□□□ -1.55
SEC22B-202ENST00000618538 PKP1Q13835 747 aa5.36□□□□□ -1.55
SEC22B-202ENST00000618538 EYA1Q99502 592 aa5.36□□□□□ -1.55
SEC22B-202ENST00000618538 SLIT1O75093 1534 aa5.36□□□□□ -1.55
SEC22B-202ENST00000618538 SALL3Q9BXA9 1300 aa5.36□□□□□ -1.55
SEC22B-202ENST00000618538 HSP90AB1P08238 724 aaKnown RBP5.36□□□□□ -1.55
SEC22B-202ENST00000618538 TSHZ3Q63HK5 1081 aa5.36□□□□□ -1.55
SEC22B-202ENST00000618538 ZNF787Q6DD87 383 aa5.36□□□□□ -1.55
SEC22B-202ENST00000618538 RNF25Q96BH1 459 aaPredicted RBP5.36□□□□□ -1.55
SEC22B-202ENST00000618538 USP26Q9BXU7 913 aa5.36□□□□□ -1.55
SEC22B-202ENST00000618538 SBNO1A3KN83 1393 aa5.36□□□□□ -1.55
SEC22B-202ENST00000618538 GOLGA6L3A6NEY3 463 aa5.35□□□□□ -1.55
SEC22B-202ENST00000618538 ONECUT3O60422 494 aaPredicted RBP5.35□□□□□ -1.55
SEC22B-202ENST00000618538 CHAMP1Q96JM3 812 aa5.35□□□□□ -1.55
SEC22B-202ENST00000618538 STK24Q9Y6E0 443 aa5.35□□□□□ -1.55
SEC22B-202ENST00000618538 N4BP2Q86UW6 1770 aaPredicted RBP5.35□□□□□ -1.55
SEC22B-202ENST00000618538 FLT4P35916 1363 aa5.35□□□□□ -1.55
SEC22B-202ENST00000618538 PTPRCP08575 1304 aa5.35□□□□□ -1.55
SEC22B-202ENST00000618538 ERBB4Q15303 1308 aa5.35□□□□□ -1.55
SEC22B-202ENST00000618538 USP54Q70EL1 1684 aa5.35□□□□□ -1.55
SEC22B-202ENST00000618538 DDX11L8A8MPP1 907 aa5.35□□□□□ -1.55
SEC22B-202ENST00000618538 CYP2E1P05181 493 aaPredicted RBP5.35□□□□□ -1.55
SEC22B-202ENST00000618538 L1TD1Q5T7N2 865 aaKnown RBP5.35□□□□□ -1.55
SEC22B-202ENST00000618538 PLPP6Q8IY26 295 aa5.35□□□□□ -1.55
SEC22B-202ENST00000618538 CHMP4BQ9H444 224 aaKnown RBP5.35□□□□□ -1.55
SEC22B-202ENST00000618538 AMOTL2Q9Y2J4 779 aa5.35□□□□□ -1.55
SEC22B-202ENST00000618538 PNMA6EA0A0J9YXQ4 647 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms