RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 TTC5Q8N0Z6 440 aa21.2■□□□□ 0.98
BRCA1-228ENST00000618469 CAPN15O75808 1086 aa21.19■□□□□ 0.98
BRCA1-228ENST00000618469 DPEP1P16444 411 aa21.19■□□□□ 0.98
BRCA1-228ENST00000618469 PLEKHF1Q96S99 279 aa21.19■□□□□ 0.98
BRCA1-228ENST00000618469 RTCBQ9Y3I0 505 aaKnown RBP21.19■□□□□ 0.98
BRCA1-228ENST00000618469 KIF13BQ9NQT8 1826 aa21.19■□□□□ 0.98
BRCA1-228ENST00000618469 CRKLP46109 303 aaKnown RBP21.18■□□□□ 0.98
BRCA1-228ENST00000618469 DNAJC10Q8IXB1 793 aa21.18■□□□□ 0.98
BRCA1-228ENST00000618469 PNNQ9H307 717 aaKnown RBP21.18■□□□□ 0.98
BRCA1-228ENST00000618469 DCTN1Q14203 1278 aa21.17■□□□□ 0.98
BRCA1-228ENST00000618469 RC3H1Q5TC82 1133 aaKnown RBP21.17■□□□□ 0.98
BRCA1-228ENST00000618469 WDR90Q96KV7 1748 aa21.17■□□□□ 0.98
BRCA1-228ENST00000618469 WDR43Q15061 677 aaKnown RBP eCLIP21.16■□□□□ 0.98
BRCA1-228ENST00000618469 NFE2L2Q16236 605 aa21.16■□□□□ 0.98
BRCA1-228ENST00000618469 ZNF790Q6PG37 636 aa21.16■□□□□ 0.98
BRCA1-228ENST00000618469 HTATSF1O43719 755 aaKnown RBP21.15■□□□□ 0.98
BRCA1-228ENST00000618469 TRAPPC3LQ5T215 181 aa21.15■□□□□ 0.98
BRCA1-228ENST00000618469 COL13A1Q5TAT6 717 aaPredicted RBP21.15■□□□□ 0.98
BRCA1-228ENST00000618469 BTBD11A6QL63 1104 aa21.14■□□□□ 0.97
BRCA1-228ENST00000618469 RPS6KA4O75676 772 aa21.14■□□□□ 0.97
BRCA1-228ENST00000618469 ADRA2BP18089 450 aa21.14■□□□□ 0.97
BRCA1-228ENST00000618469 C9orf131Q5VYM1 1079 aa21.14■□□□□ 0.97
BRCA1-228ENST00000618469 VSIG10Q8N0Z9 540 aa21.14■□□□□ 0.97
BRCA1-228ENST00000618469 ZNF496Q96IT1 587 aaPredicted RBP21.14■□□□□ 0.97
BRCA1-228ENST00000618469 KDM3BQ7LBC6 1761 aa21.13■□□□□ 0.97
BRCA1-228ENST00000618469 HEG1Q9ULI3 1381 aa21.13■□□□□ 0.97
BRCA1-228ENST00000618469 TGFB2P61812 414 aa21.13■□□□□ 0.97
BRCA1-228ENST00000618469 ARHGEF1Q92888 912 aaKnown RBP21.13■□□□□ 0.97
BRCA1-228ENST00000618469 CCDC87Q9NVE4 849 aa21.13■□□□□ 0.97
BRCA1-228ENST00000618469 BRCA1P38398 1863 aaKnown RBP21.13■□□□□ 0.97
BRCA1-228ENST00000618469 CCDC146Q8IYE0 955 aa21.12■□□□□ 0.97
BRCA1-228ENST00000618469 C10orf71Q711Q0 1435 aa21.12■□□□□ 0.97
BRCA1-228ENST00000618469 KCNQ3O43525 872 aa21.11■□□□□ 0.97
BRCA1-228ENST00000618469 CYP19A1P11511 503 aaPredicted RBP21.11■□□□□ 0.97
BRCA1-228ENST00000618469 INTS5Q6P9B9 1019 aaKnown RBP21.11■□□□□ 0.97
BRCA1-228ENST00000618469 C16orf71Q8IYS4 520 aaPredicted RBP21.11■□□□□ 0.97
BRCA1-228ENST00000618469 FMNL2Q96PY5 1086 aa21.11■□□□□ 0.97
BRCA1-228ENST00000618469 RFC4P35249 363 aa21.1■□□□□ 0.97
BRCA1-228ENST00000618469 NLGN1Q8N2Q7 840 aa21.1■□□□□ 0.97
BRCA1-228ENST00000618469 ZBTB1Q9Y2K1 713 aa21.1■□□□□ 0.97
BRCA1-228ENST00000618469 SOS1Q07889 1333 aaPredicted RBP21.09■□□□□ 0.97
BRCA1-228ENST00000618469 GYS1P13807 737 aa21.09■□□□□ 0.97
BRCA1-228ENST00000618469 KCNA3P22001 575 aa21.09■□□□□ 0.97
BRCA1-228ENST00000618469 THUMPD2Q9BTF0 503 aaKnown RBP21.09■□□□□ 0.97
BRCA1-228ENST00000618469 PARP3Q9Y6F1 533 aa21.09■□□□□ 0.97
BRCA1-228ENST00000618469 LAMB4A4D0S4 1761 aa21.09■□□□□ 0.97
BRCA1-228ENST00000618469 COL15A1P39059 1388 aa21.09■□□□□ 0.97
BRCA1-228ENST00000618469 KLRG1Q96E93 195 aa21.08■□□□□ 0.97
BRCA1-228ENST00000618469 RRAGCQ9HB90 399 aa21.08■□□□□ 0.97
BRCA1-228ENST00000618469 RBM46Q8TBY0 533 aaKnown RBP21.07■□□□□ 0.96
BRCA1-228ENST00000618469 SRP68Q9UHB9 627 aaKnown RBP21.07■□□□□ 0.96
BRCA1-228ENST00000618469 ADAMTS8Q9UP79 889 aa21.07■□□□□ 0.96
BRCA1-228ENST00000618469 USP42Q9H9J4 1324 aaKnown RBP21.06■□□□□ 0.96
BRCA1-228ENST00000618469 ARFGEF1Q9Y6D6 1849 aa21.06■□□□□ 0.96
BRCA1-228ENST00000618469 STARD3NLO95772 234 aa21.06■□□□□ 0.96
BRCA1-228ENST00000618469 RIPK4P57078 832 aa21.06■□□□□ 0.96
BRCA1-228ENST00000618469 TAF7Q15545 349 aaPredicted RBP21.06■□□□□ 0.96
BRCA1-228ENST00000618469 RNF181Q9P0P0 153 aa21.06■□□□□ 0.96
BRCA1-228ENST00000618469 RRP7AQ9Y3A4 280 aaKnown RBP21.06■□□□□ 0.96
BRCA1-228ENST00000618469 SCN7AQ01118 1682 aa21.05■□□□□ 0.96
BRCA1-228ENST00000618469 ANP32CO43423 234 aa21.05■□□□□ 0.96
BRCA1-228ENST00000618469 CANXP27824 592 aaKnown RBP21.05■□□□□ 0.96
BRCA1-228ENST00000618469 CHRNA5P30532 468 aa21.05■□□□□ 0.96
BRCA1-228ENST00000618469 TMPOP42166 694 aaKnown RBP21.05■□□□□ 0.96
BRCA1-228ENST00000618469 RUNDC1Q96C34 613 aa21.05■□□□□ 0.96
BRCA1-228ENST00000618469 LMOD3Q0VAK6 560 aa21.04■□□□□ 0.96
BRCA1-228ENST00000618469 TEX13AQ9BXU3 409 aaPredicted RBP21.04■□□□□ 0.96
BRCA1-228ENST00000618469 MIS18AQ9NYP9 233 aa21.04■□□□□ 0.96
BRCA1-228ENST00000618469 PIM2Q9P1W9 311 aa21.04■□□□□ 0.96
BRCA1-228ENST00000618469 SBF1O95248 1867 aa21.03■□□□□ 0.96
BRCA1-228ENST00000618469 NEUROD2Q15784 382 aa21.03■□□□□ 0.96
BRCA1-228ENST00000618469 PRAMEF22A3QJZ6 481 aa21.02■□□□□ 0.96
BRCA1-228ENST00000618469 FKBP8Q14318 412 aa21.02■□□□□ 0.96
BRCA1-228ENST00000618469 DALRD3Q5D0E6 543 aaKnown RBP21.02■□□□□ 0.96
BRCA1-228ENST00000618469 PNISRQ8TF01 805 aaKnown RBP21.02■□□□□ 0.96
BRCA1-228ENST00000618469 ZNF330Q9Y3S2 320 aaPredicted RBP21.02■□□□□ 0.96
BRCA1-228ENST00000618469 DDR1Q08345 913 aa21.01■□□□□ 0.95
BRCA1-228ENST00000618469 CCDC184Q52MB2 194 aa21.01■□□□□ 0.95
BRCA1-228ENST00000618469 TNS4Q8IZW8 715 aa21.01■□□□□ 0.95
BRCA1-228ENST00000618469 BCORQ6W2J9 1755 aa21■□□□□ 0.95
BRCA1-228ENST00000618469 ZPR1O75312 459 aa21■□□□□ 0.95
BRCA1-228ENST00000618469 SNRPA1P09661 255 aaKnown RBP21■□□□□ 0.95
BRCA1-228ENST00000618469 USPL1Q5W0Q7 1092 aa21■□□□□ 0.95
BRCA1-228ENST00000618469 JMYQ8N9B5 988 aa21■□□□□ 0.95
BRCA1-228ENST00000618469 KDM2BQ8NHM5 1336 aa21■□□□□ 0.95
BRCA1-228ENST00000618469 RASSF7Q02833 373 aa20.99■□□□□ 0.95
BRCA1-228ENST00000618469 FSTL1Q12841 308 aa20.99■□□□□ 0.95
BRCA1-228ENST00000618469 A1BGP04217 495 aa20.98■□□□□ 0.95
BRCA1-228ENST00000618469 EIF5P55010 431 aaKnown RBP20.98■□□□□ 0.95
BRCA1-228ENST00000618469 NARFQ9UHQ1 456 aa20.98■□□□□ 0.95
BRCA1-228ENST00000618469 TSPYL4Q9UJ04 414 aa20.98■□□□□ 0.95
BRCA1-228ENST00000618469 USP16Q9Y5T5 823 aa20.98■□□□□ 0.95
BRCA1-228ENST00000618469 PCNTO95613 3336 aa20.97■□□□□ 0.95
BRCA1-228ENST00000618469 MRS2Q9HD23 443 aa20.97■□□□□ 0.95
BRCA1-228ENST00000618469 A0A087WZG4 1122 aa20.96■□□□□ 0.95
BRCA1-228ENST00000618469 IL6STP40189 918 aaPredicted RBP20.96■□□□□ 0.95
BRCA1-228ENST00000618469 PIP4K2AP48426 406 aaPredicted RBP20.96■□□□□ 0.95
BRCA1-228ENST00000618469 TNRC6CQ9HCJ0 1690 aaKnown RBP20.96■□□□□ 0.95
BRCA1-228ENST00000618469 CCDC88AQ3V6T2 1871 aa20.95■□□□□ 0.94
BRCA1-228ENST00000618469 EIF4A1P60842 406 aaKnown RBP20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 132.8 ms