RNA–Protein interactions for RNA: ENST00000617470.4

SDHA-220, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 5 BASIC

Gene SDHA, Length 1,952 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-220ENST00000617470 MRPL50Q8N5N7 158 aaKnown RBP26.08■■□□□ 1.77
SDHA-220ENST00000617470 KCPQ6ZWJ8 1503 aa26.07■■□□□ 1.76
SDHA-220ENST00000617470 SF3B2Q13435 895 aaKnown RBP26.07■■□□□ 1.76
SDHA-220ENST00000617470 MVPQ14764 893 aaKnown RBP26.07■■□□□ 1.76
SDHA-220ENST00000617470 HEG1Q9ULI3 1381 aa26.06■■□□□ 1.76
SDHA-220ENST00000617470 PRAMEF22A3QJZ6 481 aa26.06■■□□□ 1.76
SDHA-220ENST00000617470 LOC102724428A0A0B4J2F2 783 aa26.06■■□□□ 1.76
SDHA-220ENST00000617470 SNRPA1P09661 255 aaKnown RBP26.06■■□□□ 1.76
SDHA-220ENST00000617470 SIK1P57059 783 aa26.06■■□□□ 1.76
SDHA-220ENST00000617470 SKAP1Q86WV1 359 aa26.06■■□□□ 1.76
SDHA-220ENST00000617470 UBR2Q8IWV8 1755 aa26.05■■□□□ 1.76
SDHA-220ENST00000617470 GIGYF1O75420 1035 aaPredicted RBP26.05■■□□□ 1.76
SDHA-220ENST00000617470 IGHDP01880 384 aa26.05■■□□□ 1.76
SDHA-220ENST00000617470 MS4A1P11836 297 aa26.05■■□□□ 1.76
SDHA-220ENST00000617470 ATP6V1AP38606 617 aa26.05■■□□□ 1.76
SDHA-220ENST00000617470 ILDR2Q71H61 639 aa26.05■■□□□ 1.76
SDHA-220ENST00000617470 FTSJ3Q8IY81 847 aaKnown RBP26.05■■□□□ 1.76
SDHA-220ENST00000617470 AAMPQ13685 434 aa26.04■■□□□ 1.76
SDHA-220ENST00000617470 KCNQ4P56696 695 aa26.04■■□□□ 1.76
SDHA-220ENST00000617470 NECTIN2Q92692 538 aa26.04■■□□□ 1.76
SDHA-220ENST00000617470 SLC4A9Q96Q91 983 aa26.04■■□□□ 1.76
SDHA-220ENST00000617470 EIF2S2P20042 333 aaKnown RBP26.03■■□□□ 1.76
SDHA-220ENST00000617470 IPO8O15397 1037 aaKnown RBP26.02■■□□□ 1.76
SDHA-220ENST00000617470 CCNL1Q9UK58 526 aaPredicted RBP26.02■■□□□ 1.76
SDHA-220ENST00000617470 PCDHB15Q9Y5E8 787 aa26.02■■□□□ 1.76
SDHA-220ENST00000617470 TCERG1O14776 1098 aaKnown RBP26.02■■□□□ 1.76
SDHA-220ENST00000617470 VSIG10Q8N0Z9 540 aa26.02■■□□□ 1.76
SDHA-220ENST00000617470 TNS1Q9HBL0 1735 aaKnown RBP26.01■■□□□ 1.76
SDHA-220ENST00000617470 DNAJC10Q8IXB1 793 aa26.01■■□□□ 1.75
SDHA-220ENST00000617470 TMEM57Q8N5G2 664 aa26■■□□□ 1.75
SDHA-220ENST00000617470 USP16Q9Y5T5 823 aa26■■□□□ 1.75
SDHA-220ENST00000617470 PLSCR1O15162 318 aa25.99■■□□□ 1.75
SDHA-220ENST00000617470 HDGFL1Q5TGJ6 251 aa25.99■■□□□ 1.75
SDHA-220ENST00000617470 ARHGAP45Q92619 1136 aa25.99■■□□□ 1.75
SDHA-220ENST00000617470 HOXB7P09629 217 aa25.98■■□□□ 1.75
SDHA-220ENST00000617470 BAG6P46379 1132 aa25.98■■□□□ 1.75
SDHA-220ENST00000617470 EN1Q05925 392 aaPredicted RBP25.98■■□□□ 1.75
SDHA-220ENST00000617470 ITPK1Q13572 414 aa25.98■■□□□ 1.75
SDHA-220ENST00000617470 TEX13AQ9BXU3 409 aaPredicted RBP25.98■■□□□ 1.75
SDHA-220ENST00000617470 C5P01031 1676 aa25.97■■□□□ 1.75
SDHA-220ENST00000617470 TXNRD1Q16881 649 aa25.96■■□□□ 1.75
SDHA-220ENST00000617470 CCDC125Q86Z20 511 aa25.96■■□□□ 1.75
SDHA-220ENST00000617470 SOS1Q07889 1333 aaPredicted RBP25.96■■□□□ 1.75
SDHA-220ENST00000617470 STARD3NLO95772 234 aa25.96■■□□□ 1.75
SDHA-220ENST00000617470 ITPRIPQ8IWB1 547 aa25.96■■□□□ 1.75
SDHA-220ENST00000617470 LY75O60449 1722 aa25.96■■□□□ 1.75
SDHA-220ENST00000617470 DEFB132Q7Z7B7 95 aa25.95■■□□□ 1.75
SDHA-220ENST00000617470 DDX19BQ9UMR2 479 aa25.95■■□□□ 1.75
SDHA-220ENST00000617470 SLC27A3Q5K4L6 730 aa25.95■■□□□ 1.74
SDHA-220ENST00000617470 CCDC30Q5VVM6 783 aa25.95■■□□□ 1.74
SDHA-220ENST00000617470 LRRC4BQ9NT99 713 aa25.95■■□□□ 1.74
SDHA-220ENST00000617470 EZH2Q15910 746 aaKnown RBP25.93■■□□□ 1.74
SDHA-220ENST00000617470 PROM2Q8N271 834 aa25.93■■□□□ 1.74
SDHA-220ENST00000617470 UPF1Q92900 1129 aaKnown RBP eCLIP25.93■■□□□ 1.74
SDHA-220ENST00000617470 TJP1Q07157 1748 aa25.93■■□□□ 1.74
SDHA-220ENST00000617470 CYP19A1P11511 503 aaPredicted RBP25.93■■□□□ 1.74
SDHA-220ENST00000617470 PIP4K2AP48426 406 aaPredicted RBP25.93■■□□□ 1.74
SDHA-220ENST00000617470 LINC00116Q8NCU8 138 aa25.93■■□□□ 1.74
SDHA-220ENST00000617470 CHMP4AQ9BY43 222 aa25.93■■□□□ 1.74
SDHA-220ENST00000617470 ABCC4O15439 1325 aa25.92■■□□□ 1.74
SDHA-220ENST00000617470 A1BGP04217 495 aa25.92■■□□□ 1.74
SDHA-220ENST00000617470 STK31Q9BXU1 1019 aa25.92■■□□□ 1.74
SDHA-220ENST00000617470 CAMKK2Q96RR4 588 aa25.91■■□□□ 1.74
SDHA-220ENST00000617470 ZBTB40Q9NUA8 1239 aa25.91■■□□□ 1.74
SDHA-220ENST00000617470 CHPF2Q9P2E5 772 aa25.91■■□□□ 1.74
SDHA-220ENST00000617470 CRKLP46109 303 aaKnown RBP25.9■■□□□ 1.74
SDHA-220ENST00000617470 LAMB4A4D0S4 1761 aa25.9■■□□□ 1.74
SDHA-220ENST00000617470 ANXA1P04083 346 aa25.89■■□□□ 1.74
SDHA-220ENST00000617470 MYL6BP14649 208 aa25.89■■□□□ 1.74
SDHA-220ENST00000617470 ZNF330Q9Y3S2 320 aaPredicted RBP25.89■■□□□ 1.73
SDHA-220ENST00000617470 ZNF831Q5JPB2 1677 aa25.88■■□□□ 1.73
SDHA-220ENST00000617470 SLC4A2P04920 1241 aa25.88■■□□□ 1.73
SDHA-220ENST00000617470 DBF4Q9UBU7 674 aaPredicted RBP25.88■■□□□ 1.73
SDHA-220ENST00000617470 CCDC87Q9NVE4 849 aa25.87■■□□□ 1.73
SDHA-220ENST00000617470 PROSER3Q2NL68 480 aa25.87■■□□□ 1.73
SDHA-220ENST00000617470 API5Q9BZZ5 524 aaKnown RBP25.87■■□□□ 1.73
SDHA-220ENST00000617470 ZBTB1Q9Y2K1 713 aa25.87■■□□□ 1.73
SDHA-220ENST00000617470 RGPD3A6NKT7 1758 aaPredicted RBP25.86■■□□□ 1.73
SDHA-220ENST00000617470 RGPD4Q7Z3J3 1758 aa25.86■■□□□ 1.73
SDHA-220ENST00000617470 ZBTB7BO15156 539 aaPredicted RBP25.86■■□□□ 1.73
SDHA-220ENST00000617470 DDX21Q9NR30 783 aaKnown RBP eCLIP25.86■■□□□ 1.73
SDHA-220ENST00000617470 CICQ96RK0 1608 aaPredicted RBP25.85■■□□□ 1.73
SDHA-220ENST00000617470 NBPF26B4DH59 902 aa25.85■■□□□ 1.73
SDHA-220ENST00000617470 NBPF14Q5TI25 921 aa25.85■■□□□ 1.73
SDHA-220ENST00000617470 NBPF10Q6P3W6 841 aaKnown RBP25.85■■□□□ 1.73
SDHA-220ENST00000617470 INTS5Q6P9B9 1019 aaKnown RBP25.85■■□□□ 1.73
SDHA-220ENST00000617470 NBPF15Q8N660 670 aa25.85■■□□□ 1.73
SDHA-220ENST00000617470 PDIA6Q15084 440 aa25.84■■□□□ 1.73
SDHA-220ENST00000617470 AK7Q96M32 723 aa25.84■■□□□ 1.73
SDHA-220ENST00000617470 RWDD1Q9H446 243 aaPredicted RBP25.84■■□□□ 1.73
SDHA-220ENST00000617470 COL5A3P25940 1745 aaPredicted RBP25.84■■□□□ 1.73
SDHA-220ENST00000617470 ERBB4Q15303 1308 aa25.84■■□□□ 1.73
SDHA-220ENST00000617470 CNTNAP4Q9C0A0 1308 aa25.83■■□□□ 1.73
SDHA-220ENST00000617470 TAF1LQ8IZX4 1826 aa25.83■■□□□ 1.73
SDHA-220ENST00000617470 GNPATO15228 680 aa25.83■■□□□ 1.73
SDHA-220ENST00000617470 NPM2Q86SE8 214 aaKnown RBP25.83■■□□□ 1.73
SDHA-220ENST00000617470 HMGB2P26583 209 aaKnown RBP25.82■■□□□ 1.72
SDHA-220ENST00000617470 ARXQ96QS3 562 aa25.82■■□□□ 1.72
SDHA-220ENST00000617470 HYPKQ9NX55 129 aa25.82■■□□□ 1.72
SDHA-220ENST00000617470 PDE4AP27815 886 aa25.82■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms