RNA–Protein interactions for RNA: ENST00000617422.4

CNTNAP3B-212, Transcript of contactin associated protein like 3B, humanhuman

TSL 2 BASIC

Gene CNTNAP3B, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-212ENST00000617422 PAPPAQ13219 1627 aa25.88■■□□□ 1.73
CNTNAP3B-212ENST00000617422 UBR2Q8IWV8 1755 aa25.88■■□□□ 1.73
CNTNAP3B-212ENST00000617422 NUCB1Q02818 461 aa25.88■■□□□ 1.73
CNTNAP3B-212ENST00000617422 DEKP35659 375 aaKnown RBP25.86■■□□□ 1.73
CNTNAP3B-212ENST00000617422 FMNL2Q96PY5 1086 aa25.86■■□□□ 1.73
CNTNAP3B-212ENST00000617422 DDX21Q9NR30 783 aaKnown RBP eCLIP25.86■■□□□ 1.73
CNTNAP3B-212ENST00000617422 USP44Q9H0E7 712 aa25.85■■□□□ 1.73
CNTNAP3B-212ENST00000617422 KCPQ6ZWJ8 1503 aa25.85■■□□□ 1.73
CNTNAP3B-212ENST00000617422 SNRPA1P09661 255 aaKnown RBP25.85■■□□□ 1.73
CNTNAP3B-212ENST00000617422 DNAAF4Q8WXU2 420 aa25.85■■□□□ 1.73
CNTNAP3B-212ENST00000617422 BEND3Q5T5X7 828 aa25.84■■□□□ 1.73
CNTNAP3B-212ENST00000617422 PIP4K2AP48426 406 aaPredicted RBP25.83■■□□□ 1.73
CNTNAP3B-212ENST00000617422 FAM161AQ3B820 660 aa25.83■■□□□ 1.73
CNTNAP3B-212ENST00000617422 RPAP2Q8IXW5 612 aaPredicted RBP25.83■■□□□ 1.73
CNTNAP3B-212ENST00000617422 GCC1Q96CN9 775 aa25.83■■□□□ 1.73
CNTNAP3B-212ENST00000617422 LNPKQ9C0E8 428 aa25.83■■□□□ 1.73
CNTNAP3B-212ENST00000617422 LRP10Q7Z4F1 713 aa25.83■■□□□ 1.73
CNTNAP3B-212ENST00000617422 HYPKQ9NX55 129 aa25.83■■□□□ 1.73
CNTNAP3B-212ENST00000617422 SPATA31A1Q5TZJ5 1347 aa25.82■■□□□ 1.72
CNTNAP3B-212ENST00000617422 SLIT2O94813 1529 aa25.82■■□□□ 1.72
CNTNAP3B-212ENST00000617422 CHD1LQ86WJ1 897 aa25.82■■□□□ 1.72
CNTNAP3B-212ENST00000617422 LAMB4A4D0S4 1761 aa25.82■■□□□ 1.72
CNTNAP3B-212ENST00000617422 MYL6BP14649 208 aa25.81■■□□□ 1.72
CNTNAP3B-212ENST00000617422 SRCIN1Q9C0H9 1055 aa25.81■■□□□ 1.72
CNTNAP3B-212ENST00000617422 DCTPP1Q9H773 170 aa25.81■■□□□ 1.72
CNTNAP3B-212ENST00000617422 MAP3K2Q9Y2U5 619 aa25.81■■□□□ 1.72
CNTNAP3B-212ENST00000617422 ITGB4P16144 1822 aa25.81■■□□□ 1.72
CNTNAP3B-212ENST00000617422 TNS2Q63HR2 1409 aa25.81■■□□□ 1.72
CNTNAP3B-212ENST00000617422 NBR1Q14596 966 aa25.8■■□□□ 1.72
CNTNAP3B-212ENST00000617422 ANKRD45Q5TZF3 282 aa25.8■■□□□ 1.72
CNTNAP3B-212ENST00000617422 NWD2Q9ULI1 1742 aa25.8■■□□□ 1.72
CNTNAP3B-212ENST00000617422 GNAI2P04899 355 aa25.8■■□□□ 1.72
CNTNAP3B-212ENST00000617422 AIMP1Q12904 312 aaKnown RBP25.79■■□□□ 1.72
CNTNAP3B-212ENST00000617422 KSR2Q6VAB6 950 aa25.79■■□□□ 1.72
CNTNAP3B-212ENST00000617422 GNAI3P08754 354 aa25.79■■□□□ 1.72
CNTNAP3B-212ENST00000617422 AEBP2Q6ZN18 517 aaPredicted RBP25.78■■□□□ 1.72
CNTNAP3B-212ENST00000617422 LRRFIP2Q9Y608 721 aaKnown RBP25.78■■□□□ 1.72
CNTNAP3B-212ENST00000617422 PTCD1O75127 700 aaKnown RBP25.78■■□□□ 1.72
CNTNAP3B-212ENST00000617422 PIGBQ92521 554 aa25.78■■□□□ 1.72
CNTNAP3B-212ENST00000617422 NBPF7P0C2Y1 421 aaPredicted RBP25.77■■□□□ 1.72
CNTNAP3B-212ENST00000617422 RTL5Q5HYW3 569 aaPredicted RBP25.77■■□□□ 1.72
CNTNAP3B-212ENST00000617422 CERKQ8TCT0 537 aa25.77■■□□□ 1.72
CNTNAP3B-212ENST00000617422 TMOD3Q9NYL9 352 aa25.77■■□□□ 1.72
CNTNAP3B-212ENST00000617422 SPATA31A5Q5VU36 1347 aa25.77■■□□□ 1.72
CNTNAP3B-212ENST00000617422 SPATA31A7Q8IWB4 1347 aa25.77■■□□□ 1.72
CNTNAP3B-212ENST00000617422 EXOC5O00471 708 aa25.76■■□□□ 1.71
CNTNAP3B-212ENST00000617422 XAGE3Q8WTP9 111 aa25.76■■□□□ 1.71
CNTNAP3B-212ENST00000617422 JCADQ9P266 1359 aa25.75■■□□□ 1.71
CNTNAP3B-212ENST00000617422 PNMA6EA0A0J9YXQ4 647 aa25.75■■□□□ 1.71
CNTNAP3B-212ENST00000617422 COPS6Q7L5N1 327 aa25.75■■□□□ 1.71
CNTNAP3B-212ENST00000617422 ASAP1Q9ULH1 1129 aa25.75■■□□□ 1.71
CNTNAP3B-212ENST00000617422 NBPF26B4DH59 902 aa25.74■■□□□ 1.71
CNTNAP3B-212ENST00000617422 CWF19L2Q2TBE0 894 aaKnown RBP25.74■■□□□ 1.71
CNTNAP3B-212ENST00000617422 NBPF14Q5TI25 921 aa25.74■■□□□ 1.71
CNTNAP3B-212ENST00000617422 NBPF10Q6P3W6 841 aaKnown RBP25.74■■□□□ 1.71
CNTNAP3B-212ENST00000617422 NBPF15Q8N660 670 aa25.74■■□□□ 1.71
CNTNAP3B-212ENST00000617422 UBTFL1P0CB47 393 aaPredicted RBP25.73■■□□□ 1.71
CNTNAP3B-212ENST00000617422 KAT6BQ8WYB5 2073 aa25.73■■□□□ 1.71
CNTNAP3B-212ENST00000617422 LRP6O75581 1613 aa25.72■■□□□ 1.71
CNTNAP3B-212ENST00000617422 THRAP3Q9Y2W1 955 aaKnown RBP25.72■■□□□ 1.71
CNTNAP3B-212ENST00000617422 C8orf37Q96NL8 207 aa25.72■■□□□ 1.71
CNTNAP3B-212ENST00000617422 ATG3Q9NT62 314 aa25.72■■□□□ 1.71
CNTNAP3B-212ENST00000617422 BCL9LQ86UU0 1499 aa25.72■■□□□ 1.71
CNTNAP3B-212ENST00000617422 ATP8B2P98198 1209 aa25.71■■□□□ 1.71
CNTNAP3B-212ENST00000617422 BCL9O00512 1426 aa25.71■■□□□ 1.71
CNTNAP3B-212ENST00000617422 SEC24BO95487 1268 aa25.71■■□□□ 1.71
CNTNAP3B-212ENST00000617422 DDX58O95786 925 aaKnown RBP25.7■■□□□ 1.7
CNTNAP3B-212ENST00000617422 IGKV5-2P06315 115 aa25.7■■□□□ 1.7
CNTNAP3B-212ENST00000617422 DOT1LQ8TEK3 1739 aa25.7■■□□□ 1.7
CNTNAP3B-212ENST00000617422 A1BGP04217 495 aa25.69■■□□□ 1.7
CNTNAP3B-212ENST00000617422 NPM2Q86SE8 214 aaKnown RBP25.69■■□□□ 1.7
CNTNAP3B-212ENST00000617422 CCDC9Q9Y3X0 531 aaKnown RBP25.69■■□□□ 1.7
CNTNAP3B-212ENST00000617422 APBB1O00213 710 aa25.69■■□□□ 1.7
CNTNAP3B-212ENST00000617422 SMARCA5O60264 1052 aaPredicted RBP25.69■■□□□ 1.7
CNTNAP3B-212ENST00000617422 ALDH1L1O75891 902 aa25.69■■□□□ 1.7
CNTNAP3B-212ENST00000617422 RIC3Q7Z5B4 369 aa25.69■■□□□ 1.7
CNTNAP3B-212ENST00000617422 UNC5CLQ8IV45 518 aa25.69■■□□□ 1.7
CNTNAP3B-212ENST00000617422 C16orf71Q8IYS4 520 aaPredicted RBP25.69■■□□□ 1.7
CNTNAP3B-212ENST00000617422 CDCA7Q9BWT1 371 aaPredicted RBP25.69■■□□□ 1.7
CNTNAP3B-212ENST00000617422 HMMRO75330 724 aa25.68■■□□□ 1.7
CNTNAP3B-212ENST00000617422 DDB1Q16531 1140 aa25.68■■□□□ 1.7
CNTNAP3B-212ENST00000617422 LINS1Q8NG48 757 aa25.68■■□□□ 1.7
CNTNAP3B-212ENST00000617422 ARFGEF2Q9Y6D5 1785 aa25.67■■□□□ 1.7
CNTNAP3B-212ENST00000617422 MARCH10Q8NA82 808 aaPredicted RBP25.67■■□□□ 1.7
CNTNAP3B-212ENST00000617422 NGLY1Q96IV0 654 aa25.67■■□□□ 1.7
CNTNAP3B-212ENST00000617422 EXOC6BQ9Y2D4 811 aa25.67■■□□□ 1.7
CNTNAP3B-212ENST00000617422 BARGINQ6ZT62 677 aa25.66■■□□□ 1.7
CNTNAP3B-212ENST00000617422 ANKRD13DQ6ZTN6 518 aa25.66■■□□□ 1.7
CNTNAP3B-212ENST00000617422 OTUD7AQ8TE49 926 aaPredicted RBP25.66■■□□□ 1.7
CNTNAP3B-212ENST00000617422 PRIM1P49642 420 aaKnown RBP25.65■■□□□ 1.7
CNTNAP3B-212ENST00000617422 SLC4A9Q96Q91 983 aa25.65■■□□□ 1.7
CNTNAP3B-212ENST00000617422 ERBB4Q15303 1308 aa25.65■■□□□ 1.7
CNTNAP3B-212ENST00000617422 PPP1R42Q7Z4L9 355 aa25.65■■□□□ 1.7
CNTNAP3B-212ENST00000617422 SYTL4Q96C24 671 aaPredicted RBP25.65■■□□□ 1.7
CNTNAP3B-212ENST00000617422 DDRGK1Q96HY6 314 aa25.65■■□□□ 1.7
CNTNAP3B-212ENST00000617422 METTL22Q9BUU2 404 aaPredicted RBP25.65■■□□□ 1.7
CNTNAP3B-212ENST00000617422 SSH3Q8TE77 659 aa25.64■■□□□ 1.7
CNTNAP3B-212ENST00000617422 PLEKHM2Q8IWE5 1019 aa25.63■■□□□ 1.69
CNTNAP3B-212ENST00000617422 DNAJC10Q8IXB1 793 aa25.63■■□□□ 1.69
CNTNAP3B-212ENST00000617422 MYD88Q99836 296 aa25.63■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms