RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 INTS5Q6P9B9 1019 aaKnown RBP20.14■□□□□ 0.81
PCDHGC3-204ENST00000617222 CCDC87Q9NVE4 849 aa20.14■□□□□ 0.81
PCDHGC3-204ENST00000617222 CNTNAP4Q9C0A0 1308 aa20.13■□□□□ 0.81
PCDHGC3-204ENST00000617222 CANXP27824 592 aaKnown RBP20.13■□□□□ 0.81
PCDHGC3-204ENST00000617222 PIP4K2AP48426 406 aaPredicted RBP20.13■□□□□ 0.81
PCDHGC3-204ENST00000617222 AK7Q96M32 723 aa20.13■□□□□ 0.81
PCDHGC3-204ENST00000617222 TCERG1O14776 1098 aaKnown RBP20.12■□□□□ 0.81
PCDHGC3-204ENST00000617222 ZNF827Q17R98 1081 aa20.12■□□□□ 0.81
PCDHGC3-204ENST00000617222 NBPF14Q5TI25 921 aa20.12■□□□□ 0.81
PCDHGC3-204ENST00000617222 AKT1S1Q96B36 256 aa20.12■□□□□ 0.81
PCDHGC3-204ENST00000617222 ANO8Q9HCE9 1232 aaPredicted RBP20.12■□□□□ 0.81
PCDHGC3-204ENST00000617222 ZBTB1Q9Y2K1 713 aa20.12■□□□□ 0.81
PCDHGC3-204ENST00000617222 RGPD3A6NKT7 1758 aaPredicted RBP20.12■□□□□ 0.81
PCDHGC3-204ENST00000617222 RGPD4Q7Z3J3 1758 aa20.12■□□□□ 0.81
PCDHGC3-204ENST00000617222 NBPF26B4DH59 902 aa20.11■□□□□ 0.81
PCDHGC3-204ENST00000617222 GNPATO15228 680 aa20.11■□□□□ 0.81
PCDHGC3-204ENST00000617222 CCDC30Q5VVM6 783 aa20.11■□□□□ 0.81
PCDHGC3-204ENST00000617222 NBPF10Q6P3W6 841 aaKnown RBP20.11■□□□□ 0.81
PCDHGC3-204ENST00000617222 NBPF15Q8N660 670 aa20.11■□□□□ 0.81
PCDHGC3-204ENST00000617222 CHMP4AQ9BY43 222 aa20.11■□□□□ 0.81
PCDHGC3-204ENST00000617222 STK32BQ9NY57 414 aa20.11■□□□□ 0.81
PCDHGC3-204ENST00000617222 TJP1Q07157 1748 aa20.1■□□□□ 0.81
PCDHGC3-204ENST00000617222 RPS6KA4O75676 772 aa20.1■□□□□ 0.81
PCDHGC3-204ENST00000617222 SMIM5Q71RC9 77 aa20.1■□□□□ 0.81
PCDHGC3-204ENST00000617222 TFCP2L1Q9NZI6 479 aa20.1■□□□□ 0.81
PCDHGC3-204ENST00000617222 ZNF831Q5JPB2 1677 aa20.1■□□□□ 0.81
PCDHGC3-204ENST00000617222 ANXA1P04083 346 aa20.09■□□□□ 0.81
PCDHGC3-204ENST00000617222 CT47B1P0C2W7 299 aaPredicted RBP20.09■□□□□ 0.81
PCDHGC3-204ENST00000617222 SLC15A2Q16348 729 aa20.09■□□□□ 0.81
PCDHGC3-204ENST00000617222 CHPF2Q9P2E5 772 aa20.09■□□□□ 0.81
PCDHGC3-204ENST00000617222 RTCBQ9Y3I0 505 aaKnown RBP20.09■□□□□ 0.81
PCDHGC3-204ENST00000617222 MYL6BP14649 208 aa20.08■□□□□ 0.81
PCDHGC3-204ENST00000617222 PDIA6Q15084 440 aa20.08■□□□□ 0.81
PCDHGC3-204ENST00000617222 PROSER3Q2NL68 480 aa20.08■□□□□ 0.81
PCDHGC3-204ENST00000617222 AMIGO3Q86WK7 504 aa20.08■□□□□ 0.81
PCDHGC3-204ENST00000617222 DBF4Q9UBU7 674 aaPredicted RBP20.08■□□□□ 0.81
PCDHGC3-204ENST00000617222 ZNF330Q9Y3S2 320 aaPredicted RBP20.08■□□□□ 0.81
PCDHGC3-204ENST00000617222 ERBB4Q15303 1308 aa20.07■□□□□ 0.8
PCDHGC3-204ENST00000617222 C5P01031 1676 aa20.07■□□□□ 0.8
PCDHGC3-204ENST00000617222 PHF14O94880 888 aa20.07■□□□□ 0.8
PCDHGC3-204ENST00000617222 STK31Q9BXU1 1019 aa20.07■□□□□ 0.8
PCDHGC3-204ENST00000617222 DDX21Q9NR30 783 aaKnown RBP eCLIP20.07■□□□□ 0.8
PCDHGC3-204ENST00000617222 RREB1Q92766 1687 aa20.07■□□□□ 0.8
PCDHGC3-204ENST00000617222 C4BP0C0L5 1744 aa20.06■□□□□ 0.8
PCDHGC3-204ENST00000617222 IL6STP40189 918 aaPredicted RBP20.06■□□□□ 0.8
PCDHGC3-204ENST00000617222 EIF5P55010 431 aaKnown RBP20.06■□□□□ 0.8
PCDHGC3-204ENST00000617222 CICQ96RK0 1608 aaPredicted RBP20.05■□□□□ 0.8
PCDHGC3-204ENST00000617222 SLC4A2P04920 1241 aa20.05■□□□□ 0.8
PCDHGC3-204ENST00000617222 TRAPPC3LQ5T215 181 aa20.05■□□□□ 0.8
PCDHGC3-204ENST00000617222 NPM2Q86SE8 214 aaKnown RBP20.05■□□□□ 0.8
PCDHGC3-204ENST00000617222 ZNF428Q96B54 188 aa20.05■□□□□ 0.8
PCDHGC3-204ENST00000617222 ARXQ96QS3 562 aa20.05■□□□□ 0.8
PCDHGC3-204ENST00000617222 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.04■□□□□ 0.8
PCDHGC3-204ENST00000617222 SSH1Q8WYL5 1049 aa20.04■□□□□ 0.8
PCDHGC3-204ENST00000617222 HYPKQ9NX55 129 aa20.04■□□□□ 0.8
PCDHGC3-204ENST00000617222 COL5A3P25940 1745 aaPredicted RBP20.04■□□□□ 0.8
PCDHGC3-204ENST00000617222 TAF1LQ8IZX4 1826 aa20.04■□□□□ 0.8
PCDHGC3-204ENST00000617222 MYH14Q7Z406 1995 aaKnown RBP20.03■□□□□ 0.8
PCDHGC3-204ENST00000617222 NUP188Q5SRE5 1749 aa20.03■□□□□ 0.8
PCDHGC3-204ENST00000617222 SSFA2P28290 1259 aa20.03■□□□□ 0.8
PCDHGC3-204ENST00000617222 RARSP54136 660 aaKnown RBP20.03■□□□□ 0.8
PCDHGC3-204ENST00000617222 LRP10Q7Z4F1 713 aa20.03■□□□□ 0.8
PCDHGC3-204ENST00000617222 ARHGEF1Q92888 912 aaKnown RBP20.03■□□□□ 0.8
PCDHGC3-204ENST00000617222 A0A087WZG4 1122 aa20.02■□□□□ 0.8
PCDHGC3-204ENST00000617222 MSH5O43196 834 aa20.02■□□□□ 0.8
PCDHGC3-204ENST00000617222 ADRA2BP18089 450 aa20.02■□□□□ 0.8
PCDHGC3-204ENST00000617222 AIMP1Q12904 312 aaKnown RBP20.02■□□□□ 0.8
PCDHGC3-204ENST00000617222 R3HDM1Q15032 1099 aaKnown RBP20.02■□□□□ 0.8
PCDHGC3-204ENST00000617222 ALDH1L2Q3SY69 923 aa20.02■□□□□ 0.8
PCDHGC3-204ENST00000617222 COPS6Q7L5N1 327 aa20.02■□□□□ 0.8
PCDHGC3-204ENST00000617222 COL23A1Q86Y22 540 aaPredicted RBP20.02■□□□□ 0.8
PCDHGC3-204ENST00000617222 XAGE3Q8WTP9 111 aa20.02■□□□□ 0.8
PCDHGC3-204ENST00000617222 BCL2L13Q9BXK5 485 aa20.02■□□□□ 0.8
PCDHGC3-204ENST00000617222 PHAXQ9H814 394 aaKnown RBP20.02■□□□□ 0.8
PCDHGC3-204ENST00000617222 TBC1D2BQ9UPU7 963 aa20.02■□□□□ 0.8
PCDHGC3-204ENST00000617222 PNPLA7Q6ZV29 1317 aa20.02■□□□□ 0.79
PCDHGC3-204ENST00000617222 TTLL7Q6ZT98 887 aa20.01■□□□□ 0.79
PCDHGC3-204ENST00000617222 G2E3Q7L622 706 aa20.01■□□□□ 0.79
PCDHGC3-204ENST00000617222 MRPL50Q8N5N7 158 aaKnown RBP20.01■□□□□ 0.79
PCDHGC3-204ENST00000617222 FLAD1Q8NFF5 587 aa20.01■□□□□ 0.79
PCDHGC3-204ENST00000617222 SMC4Q9NTJ3 1288 aa20.01■□□□□ 0.79
PCDHGC3-204ENST00000617222 LAMB4A4D0S4 1761 aa20■□□□□ 0.79
PCDHGC3-204ENST00000617222 COL15A1P39059 1388 aa20■□□□□ 0.79
PCDHGC3-204ENST00000617222 RFC4P35249 363 aa20■□□□□ 0.79
PCDHGC3-204ENST00000617222 DZIP3Q86Y13 1208 aaKnown RBP20■□□□□ 0.79
PCDHGC3-204ENST00000617222 PSDA5PKW4 1024 aaPredicted RBP19.99■□□□□ 0.79
PCDHGC3-204ENST00000617222 BCAR3O75815 825 aa19.98■□□□□ 0.79
PCDHGC3-204ENST00000617222 SRP68Q9UHB9 627 aaKnown RBP19.98■□□□□ 0.79
PCDHGC3-204ENST00000617222 RCAN3Q9UKA8 241 aa19.98■□□□□ 0.79
PCDHGC3-204ENST00000617222 ZPR1O75312 459 aa19.97■□□□□ 0.79
PCDHGC3-204ENST00000617222 FLIIQ13045 1269 aa19.97■□□□□ 0.79
PCDHGC3-204ENST00000617222 KIF6Q6ZMV9 814 aa19.97■□□□□ 0.79
PCDHGC3-204ENST00000617222 PDGFDQ9GZP0 370 aaPredicted RBP19.97■□□□□ 0.79
PCDHGC3-204ENST00000617222 NARFQ9UHQ1 456 aa19.97■□□□□ 0.79
PCDHGC3-204ENST00000617222 USPL1Q5W0Q7 1092 aa19.96■□□□□ 0.79
PCDHGC3-204ENST00000617222 ANKRD13DQ6ZTN6 518 aa19.96■□□□□ 0.79
PCDHGC3-204ENST00000617222 CAMTA2O94983 1202 aa19.95■□□□□ 0.78
PCDHGC3-204ENST00000617222 BRPF1P55201 1214 aaPredicted RBP19.95■□□□□ 0.78
PCDHGC3-204ENST00000617222 ZBTB3Q9H5J0 574 aa19.95■□□□□ 0.78
PCDHGC3-204ENST00000617222 DDX58O95786 925 aaKnown RBP19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms