RNA–Protein interactions for RNA: ENST00000617022.4

DDB2-212, Transcript of damage specific DNA binding protein 2, humanhuman

TSL 2

Gene DDB2, Length 2,181 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB2-212ENST00000617022 CHPF2Q9P2E5 772 aa20.22■□□□□ 0.83
DDB2-212ENST00000617022 PRIM1P49642 420 aaKnown RBP20.22■□□□□ 0.83
DDB2-212ENST00000617022 TMEM57Q8N5G2 664 aa20.22■□□□□ 0.83
DDB2-212ENST00000617022 FBXO41Q8TF61 875 aa20.22■□□□□ 0.83
DDB2-212ENST00000617022 ACSBG1Q96GR2 724 aa20.22■□□□□ 0.83
DDB2-212ENST00000617022 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.22■□□□□ 0.83
DDB2-212ENST00000617022 KAT6BQ8WYB5 2073 aa20.22■□□□□ 0.83
DDB2-212ENST00000617022 BCL9O00512 1426 aa20.21■□□□□ 0.83
DDB2-212ENST00000617022 MVPQ14764 893 aaKnown RBP20.21■□□□□ 0.83
DDB2-212ENST00000617022 API5Q9BZZ5 524 aaKnown RBP20.21■□□□□ 0.83
DDB2-212ENST00000617022 UBR2Q8IWV8 1755 aa20.21■□□□□ 0.83
DDB2-212ENST00000617022 KCPQ6ZWJ8 1503 aa20.21■□□□□ 0.83
DDB2-212ENST00000617022 PTCD1O75127 700 aaKnown RBP20.21■□□□□ 0.83
DDB2-212ENST00000617022 ANXA1P04083 346 aa20.21■□□□□ 0.83
DDB2-212ENST00000617022 ITPRIPQ8IWB1 547 aa20.21■□□□□ 0.83
DDB2-212ENST00000617022 ASAP1Q9ULH1 1129 aa20.21■□□□□ 0.83
DDB2-212ENST00000617022 SNRPA1P09661 255 aaKnown RBP20.2■□□□□ 0.82
DDB2-212ENST00000617022 PTPRCP08575 1304 aa20.2■□□□□ 0.82
DDB2-212ENST00000617022 RGS12O14924 1447 aa20.2■□□□□ 0.82
DDB2-212ENST00000617022 FLIIQ13045 1269 aa20.19■□□□□ 0.82
DDB2-212ENST00000617022 PHAXQ9H814 394 aaKnown RBP20.19■□□□□ 0.82
DDB2-212ENST00000617022 CHMP4AQ9BY43 222 aa20.19■□□□□ 0.82
DDB2-212ENST00000617022 ATG3Q9NT62 314 aa20.19■□□□□ 0.82
DDB2-212ENST00000617022 USP16Q9Y5T5 823 aa20.19■□□□□ 0.82
DDB2-212ENST00000617022 ABCC4O15439 1325 aa20.19■□□□□ 0.82
DDB2-212ENST00000617022 PROSER3Q2NL68 480 aa20.18■□□□□ 0.82
DDB2-212ENST00000617022 DBF4Q9UBU7 674 aaPredicted RBP20.18■□□□□ 0.82
DDB2-212ENST00000617022 ONECUT3O60422 494 aaPredicted RBP20.17■□□□□ 0.82
DDB2-212ENST00000617022 FKBP5Q13451 457 aaPredicted RBP20.17■□□□□ 0.82
DDB2-212ENST00000617022 SEPT12Q8IYM1 358 aa20.17■□□□□ 0.82
DDB2-212ENST00000617022 CACNA1FO60840 1977 aa20.16■□□□□ 0.82
DDB2-212ENST00000617022 F6X3S4 739 aa20.16■□□□□ 0.82
DDB2-212ENST00000617022 FAM182BQ5T319 152 aa20.16■□□□□ 0.82
DDB2-212ENST00000617022 DDX19BQ9UMR2 479 aa20.15■□□□□ 0.82
DDB2-212ENST00000617022 KCNQ2O43526 872 aa20.14■□□□□ 0.81
DDB2-212ENST00000617022 PDIA6Q15084 440 aa20.14■□□□□ 0.81
DDB2-212ENST00000617022 RBM42Q9BTD8 480 aaKnown RBP20.14■□□□□ 0.81
DDB2-212ENST00000617022 LAMB4A4D0S4 1761 aa20.14■□□□□ 0.81
DDB2-212ENST00000617022 PIP4K2AP48426 406 aaPredicted RBP20.14■□□□□ 0.81
DDB2-212ENST00000617022 ILDR1Q86SU0 546 aaPredicted RBP20.14■□□□□ 0.81
DDB2-212ENST00000617022 MYL6BP14649 208 aa20.13■□□□□ 0.81
DDB2-212ENST00000617022 ZNF772Q68DY9 489 aaPredicted RBP20.13■□□□□ 0.81
DDB2-212ENST00000617022 SLC4A10Q6U841 1118 aa20.13■□□□□ 0.81
DDB2-212ENST00000617022 DDX21Q9NR30 783 aaKnown RBP eCLIP20.13■□□□□ 0.81
DDB2-212ENST00000617022 HYPKQ9NX55 129 aa20.11■□□□□ 0.81
DDB2-212ENST00000617022 INTS3Q68E01 1043 aaKnown RBP20.11■□□□□ 0.81
DDB2-212ENST00000617022 SLC4A9Q96Q91 983 aa20.1■□□□□ 0.81
DDB2-212ENST00000617022 DNAJC10Q8IXB1 793 aa20.1■□□□□ 0.81
DDB2-212ENST00000617022 AIMP1Q12904 312 aaKnown RBP20.09■□□□□ 0.81
DDB2-212ENST00000617022 VSIG10Q8N0Z9 540 aa20.09■□□□□ 0.81
DDB2-212ENST00000617022 PI4KAP2A4QPH2 592 aa20.08■□□□□ 0.81
DDB2-212ENST00000617022 ZBTB7BO15156 539 aaPredicted RBP20.08■□□□□ 0.81
DDB2-212ENST00000617022 A1BGP04217 495 aa20.08■□□□□ 0.81
DDB2-212ENST00000617022 PTF1AQ7RTS3 328 aa20.08■□□□□ 0.81
DDB2-212ENST00000617022 PI4KAP1Q8N8J0 262 aa20.08■□□□□ 0.81
DDB2-212ENST00000617022 AAMPQ13685 434 aa20.08■□□□□ 0.8
DDB2-212ENST00000617022 ZBTB40Q9NUA8 1239 aa20.08■□□□□ 0.8
DDB2-212ENST00000617022 PCDHB15Q9Y5E8 787 aa20.08■□□□□ 0.8
DDB2-212ENST00000617022 NBPF26B4DH59 902 aa20.07■□□□□ 0.8
DDB2-212ENST00000617022 RBM6P78332 1123 aaKnown RBP20.07■□□□□ 0.8
DDB2-212ENST00000617022 NBPF14Q5TI25 921 aa20.07■□□□□ 0.8
DDB2-212ENST00000617022 NBPF10Q6P3W6 841 aaKnown RBP20.07■□□□□ 0.8
DDB2-212ENST00000617022 LRP10Q7Z4F1 713 aa20.07■□□□□ 0.8
DDB2-212ENST00000617022 NBPF15Q8N660 670 aa20.07■□□□□ 0.8
DDB2-212ENST00000617022 XAGE3Q8WTP9 111 aa20.07■□□□□ 0.8
DDB2-212ENST00000617022 ADCY9O60503 1353 aa20.06■□□□□ 0.8
DDB2-212ENST00000617022 CCT4P50991 539 aaKnown RBP20.06■□□□□ 0.8
DDB2-212ENST00000617022 GSE1Q14687 1217 aa20.06■□□□□ 0.8
DDB2-212ENST00000617022 PALLDQ8WX93 1383 aa20.06■□□□□ 0.8
DDB2-212ENST00000617022 COPS6Q7L5N1 327 aa20.05■□□□□ 0.8
DDB2-212ENST00000617022 ERBB4Q15303 1308 aa20.05■□□□□ 0.8
DDB2-212ENST00000617022 DNAAF4Q8WXU2 420 aa20.05■□□□□ 0.8
DDB2-212ENST00000617022 TEX13AQ9BXU3 409 aaPredicted RBP20.05■□□□□ 0.8
DDB2-212ENST00000617022 BRWD3Q6RI45 1802 aa20.05■□□□□ 0.8
DDB2-212ENST00000617022 KSR2Q6VAB6 950 aa20.04■□□□□ 0.8
DDB2-212ENST00000617022 C1orf115Q9H7X2 142 aa20.04■□□□□ 0.8
DDB2-212ENST00000617022 MAP3K2Q9Y2U5 619 aa20.04■□□□□ 0.8
DDB2-212ENST00000617022 PXDNLA1KZ92 1463 aa20.04■□□□□ 0.8
DDB2-212ENST00000617022 NHSQ6T4R5 1651 aa20.04■□□□□ 0.8
DDB2-212ENST00000617022 PDE4AP27815 886 aa20.04■□□□□ 0.8
DDB2-212ENST00000617022 KRT27Q7Z3Y8 459 aa20.04■□□□□ 0.8
DDB2-212ENST00000617022 BACH2Q9BYV9 841 aa20.04■□□□□ 0.8
DDB2-212ENST00000617022 TJP1Q07157 1748 aa20.04■□□□□ 0.8
DDB2-212ENST00000617022 STARD3NLO95772 234 aa20.03■□□□□ 0.8
DDB2-212ENST00000617022 DDX58O95786 925 aaKnown RBP20.03■□□□□ 0.8
DDB2-212ENST00000617022 RGS17Q9UGC6 210 aaPredicted RBP20.03■□□□□ 0.8
DDB2-212ENST00000617022 BRPF3Q9ULD4 1205 aa20.03■□□□□ 0.8
DDB2-212ENST00000617022 LOC102724428A0A0B4J2F2 783 aa20.02■□□□□ 0.8
DDB2-212ENST00000617022 IGHDP01880 384 aa20.02■□□□□ 0.8
DDB2-212ENST00000617022 SIK1P57059 783 aa20.02■□□□□ 0.8
DDB2-212ENST00000617022 SMARCC1Q92922 1105 aaPredicted RBP20.02■□□□□ 0.8
DDB2-212ENST00000617022 MEIS3Q99687 375 aa20.02■□□□□ 0.8
DDB2-212ENST00000617022 CHMP4BQ9H444 224 aaKnown RBP20.02■□□□□ 0.8
DDB2-212ENST00000617022 ATP6V1AP38606 617 aa20.02■□□□□ 0.8
DDB2-212ENST00000617022 NPM2Q86SE8 214 aaKnown RBP20.02■□□□□ 0.8
DDB2-212ENST00000617022 BTAF1O14981 1849 aa20.01■□□□□ 0.79
DDB2-212ENST00000617022 KDM2BQ8NHM5 1336 aa20.01■□□□□ 0.79
DDB2-212ENST00000617022 CYP19A1P11511 503 aaPredicted RBP20.01■□□□□ 0.79
DDB2-212ENST00000617022 RIC3Q7Z5B4 369 aa20.01■□□□□ 0.79
DDB2-212ENST00000617022 SBF2Q86WG5 1849 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms