RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 WDR90Q96KV7 1748 aa19.82■□□□□ 0.76
UBXN1-218ENST00000616865 DNAJC10Q8IXB1 793 aa19.82■□□□□ 0.76
UBXN1-218ENST00000616865 CFAP53Q96M91 514 aa19.82■□□□□ 0.76
UBXN1-218ENST00000616865 NMRK2Q9NPI5 230 aa19.82■□□□□ 0.76
UBXN1-218ENST00000616865 TNRC6CQ9HCJ0 1690 aaKnown RBP19.81■□□□□ 0.76
UBXN1-218ENST00000616865 SOS1Q07889 1333 aaPredicted RBP19.81■□□□□ 0.76
UBXN1-218ENST00000616865 POLRMTO00411 1230 aaKnown RBP19.81■□□□□ 0.76
UBXN1-218ENST00000616865 APLP1P51693 650 aa19.81■□□□□ 0.76
UBXN1-218ENST00000616865 DALRD3Q5D0E6 543 aaKnown RBP19.81■□□□□ 0.76
UBXN1-218ENST00000616865 C9orf131Q5VYM1 1079 aa19.81■□□□□ 0.76
UBXN1-218ENST00000616865 SBF1O95248 1867 aa19.81■□□□□ 0.76
UBXN1-218ENST00000616865 TM4SF1P30408 202 aa19.8■□□□□ 0.76
UBXN1-218ENST00000616865 LGR6Q9HBX8 967 aa19.8■□□□□ 0.76
UBXN1-218ENST00000616865 COL15A1P39059 1388 aa19.8■□□□□ 0.76
UBXN1-218ENST00000616865 RNMTO43148 476 aaKnown RBP19.79■□□□□ 0.76
UBXN1-218ENST00000616865 ZPR1O75312 459 aa19.79■□□□□ 0.76
UBXN1-218ENST00000616865 CHRNA5P30532 468 aa19.79■□□□□ 0.76
UBXN1-218ENST00000616865 USPL1Q5W0Q7 1092 aa19.79■□□□□ 0.76
UBXN1-218ENST00000616865 HMOX1P09601 288 aa19.78■□□□□ 0.76
UBXN1-218ENST00000616865 CYP19A1P11511 503 aaPredicted RBP19.78■□□□□ 0.76
UBXN1-218ENST00000616865 SLC39A6Q13433 755 aa19.77■□□□□ 0.76
UBXN1-218ENST00000616865 RBM46Q8TBY0 533 aaKnown RBP19.76■□□□□ 0.75
UBXN1-218ENST00000616865 RNF181Q9P0P0 153 aa19.76■□□□□ 0.75
UBXN1-218ENST00000616865 NARFQ9UHQ1 456 aa19.76■□□□□ 0.75
UBXN1-218ENST00000616865 ZBTB1Q9Y2K1 713 aa19.76■□□□□ 0.75
UBXN1-218ENST00000616865 MTHFSDQ2M296 383 aaKnown RBP19.75■□□□□ 0.75
UBXN1-218ENST00000616865 SIPA1L3O60292 1781 aaPredicted RBP19.75■□□□□ 0.75
UBXN1-218ENST00000616865 KDM2BQ8NHM5 1336 aa19.75■□□□□ 0.75
UBXN1-218ENST00000616865 SCN7AQ01118 1682 aa19.75■□□□□ 0.75
UBXN1-218ENST00000616865 COL3A1P02461 1466 aaPredicted RBP19.74■□□□□ 0.75
UBXN1-218ENST00000616865 TIAM2Q8IVF5 1701 aa19.74■□□□□ 0.75
UBXN1-218ENST00000616865 NFIXQ14938 502 aa19.74■□□□□ 0.75
UBXN1-218ENST00000616865 VSIG10Q8N0Z9 540 aa19.74■□□□□ 0.75
UBXN1-218ENST00000616865 MIER1Q8N108 512 aa19.74■□□□□ 0.75
UBXN1-218ENST00000616865 DIAPH1O60610 1272 aaKnown RBP19.73■□□□□ 0.75
UBXN1-218ENST00000616865 C16orf71Q8IYS4 520 aaPredicted RBP19.73■□□□□ 0.75
UBXN1-218ENST00000616865 DNAJC5GQ8N7S2 189 aa19.73■□□□□ 0.75
UBXN1-218ENST00000616865 BCL2L12Q9HB09 334 aa19.72■□□□□ 0.75
UBXN1-218ENST00000616865 MRS2Q9HD23 443 aa19.71■□□□□ 0.75
UBXN1-218ENST00000616865 NUDCQ9Y266 331 aa19.71■□□□□ 0.75
UBXN1-218ENST00000616865 CARMIL3Q8ND23 1372 aa19.7■□□□□ 0.74
UBXN1-218ENST00000616865 SERPINB2P05120 415 aa19.7■□□□□ 0.74
UBXN1-218ENST00000616865 RASSF7Q02833 373 aa19.7■□□□□ 0.74
UBXN1-218ENST00000616865 ANKRD31Q8N7Z5 1873 aa19.7■□□□□ 0.74
UBXN1-218ENST00000616865 ZC3H4Q9UPT8 1303 aaKnown RBP19.7■□□□□ 0.74
UBXN1-218ENST00000616865 FSTL1Q12841 308 aa19.69■□□□□ 0.74
UBXN1-218ENST00000616865 TTC5Q8N0Z6 440 aa19.69■□□□□ 0.74
UBXN1-218ENST00000616865 CCDC88AQ3V6T2 1871 aa19.69■□□□□ 0.74
UBXN1-218ENST00000616865 COL11A2P13942 1736 aaPredicted RBP19.68■□□□□ 0.74
UBXN1-218ENST00000616865 CCER2I3L3R5 266 aa19.68■□□□□ 0.74
UBXN1-218ENST00000616865 U2SURPO15042 1029 aaKnown RBP19.68■□□□□ 0.74
UBXN1-218ENST00000616865 CANXP27824 592 aaKnown RBP19.68■□□□□ 0.74
UBXN1-218ENST00000616865 RRAGCQ9HB90 399 aa19.68■□□□□ 0.74
UBXN1-218ENST00000616865 WDR43Q15061 677 aaKnown RBP eCLIP19.67■□□□□ 0.74
UBXN1-218ENST00000616865 BCORQ6W2J9 1755 aa19.66■□□□□ 0.74
UBXN1-218ENST00000616865 STARD3NLO95772 234 aa19.66■□□□□ 0.74
UBXN1-218ENST00000616865 LMNB1P20700 586 aa19.66■□□□□ 0.74
UBXN1-218ENST00000616865 EIF5P55010 431 aaKnown RBP19.66■□□□□ 0.74
UBXN1-218ENST00000616865 TTLL6Q8N841 843 aa19.66■□□□□ 0.74
UBXN1-218ENST00000616865 HEG1Q9ULI3 1381 aa19.66■□□□□ 0.74
UBXN1-218ENST00000616865 PRELPP51888 382 aa19.65■□□□□ 0.74
UBXN1-218ENST00000616865 HTRA3P83110 453 aa19.65■□□□□ 0.74
UBXN1-218ENST00000616865 C2CD5Q86YS7 1000 aa19.65■□□□□ 0.74
UBXN1-218ENST00000616865 A0A087WZG4 1122 aa19.64■□□□□ 0.73
UBXN1-218ENST00000616865 TEFQ10587 303 aa19.64■□□□□ 0.73
UBXN1-218ENST00000616865 ZNF790Q6PG37 636 aa19.64■□□□□ 0.73
UBXN1-218ENST00000616865 BICDL1Q6ZP65 573 aa19.64■□□□□ 0.73
UBXN1-218ENST00000616865 GAS2L2Q8NHY3 880 aa19.64■□□□□ 0.73
UBXN1-218ENST00000616865 KLRG1Q96E93 195 aa19.64■□□□□ 0.73
UBXN1-218ENST00000616865 ZNF496Q96IT1 587 aaPredicted RBP19.64■□□□□ 0.73
UBXN1-218ENST00000616865 GNAT3A8MTJ3 354 aa19.63■□□□□ 0.73
UBXN1-218ENST00000616865 H0YIN7 160 aa19.63■□□□□ 0.73
UBXN1-218ENST00000616865 U2AF1L5P0DN76 240 aaPredicted RBP19.63■□□□□ 0.73
UBXN1-218ENST00000616865 U2AF1Q01081 240 aaKnown RBP eCLIP19.63■□□□□ 0.73
UBXN1-218ENST00000616865 CCDC184Q52MB2 194 aa19.63■□□□□ 0.73
UBXN1-218ENST00000616865 SMC1BQ8NDV3 1235 aa19.63■□□□□ 0.73
UBXN1-218ENST00000616865 DICER1Q9UPY3 1922 aaKnown RBP19.63■□□□□ 0.73
UBXN1-218ENST00000616865 FER1L6Q2WGJ9 1857 aa19.62■□□□□ 0.73
UBXN1-218ENST00000616865 NFKBIEO00221 500 aa19.62■□□□□ 0.73
UBXN1-218ENST00000616865 TBC1D9BQ66K14 1250 aa19.62■□□□□ 0.73
UBXN1-218ENST00000616865 IL17REQ8NFR9 667 aa19.62■□□□□ 0.73
UBXN1-218ENST00000616865 CACNA1SQ13698 1873 aa19.62■□□□□ 0.73
UBXN1-218ENST00000616865 CEMIPQ8WUJ3 1361 aa19.61■□□□□ 0.73
UBXN1-218ENST00000616865 GLTPD2A6NH11 291 aa19.61■□□□□ 0.73
UBXN1-218ENST00000616865 TEX13AQ9BXU3 409 aaPredicted RBP19.61■□□□□ 0.73
UBXN1-218ENST00000616865 ARFGEF2Q9Y6D5 1785 aa19.61■□□□□ 0.73
UBXN1-218ENST00000616865 IL6STP40189 918 aaPredicted RBP19.6■□□□□ 0.73
UBXN1-218ENST00000616865 JMYQ8N9B5 988 aa19.6■□□□□ 0.73
UBXN1-218ENST00000616865 PRR5LQ6MZQ0 368 aa19.59■□□□□ 0.73
UBXN1-218ENST00000616865 FMNL2Q96PY5 1086 aa19.59■□□□□ 0.73
UBXN1-218ENST00000616865 PDZRN3Q9UPQ7 1066 aa19.59■□□□□ 0.73
UBXN1-218ENST00000616865 TBC1D2BQ9UPU7 963 aa19.59■□□□□ 0.73
UBXN1-218ENST00000616865 ZNF330Q9Y3S2 320 aaPredicted RBP19.59■□□□□ 0.73
UBXN1-218ENST00000616865 VEGFAP15692 232 aaPredicted RBP19.58■□□□□ 0.72
UBXN1-218ENST00000616865 PDE6BP35913 854 aa19.58■□□□□ 0.72
UBXN1-218ENST00000616865 BRIP1Q9BX63 1249 aa19.58■□□□□ 0.72
UBXN1-218ENST00000616865 PNNQ9H307 717 aaKnown RBP19.58■□□□□ 0.72
UBXN1-218ENST00000616865 NEFMP07197 916 aa19.57■□□□□ 0.72
UBXN1-218ENST00000616865 FAM9BQ8IZU0 186 aa19.57■□□□□ 0.72
UBXN1-218ENST00000616865 ZNF622Q969S3 477 aaKnown RBP eCLIP19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms