RNA–Protein interactions for RNA: ENST00000616545.4

TARDBP-217, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-217ENST00000616545 CCDC125Q86Z20 511 aa14.89□□□□□ -0.03
TARDBP-217ENST00000616545 RRP1P56182 461 aaKnown RBP14.88□□□□□ -0.03
TARDBP-217ENST00000616545 ZKSCAN2Q63HK3 967 aa14.88□□□□□ -0.03
TARDBP-217ENST00000616545 LAMB4A4D0S4 1761 aa14.88□□□□□ -0.03
TARDBP-217ENST00000616545 CYP19A1P11511 503 aaPredicted RBP14.87□□□□□ -0.03
TARDBP-217ENST00000616545 PDE3AQ14432 1141 aa14.87□□□□□ -0.03
TARDBP-217ENST00000616545 DNAJC10Q8IXB1 793 aa14.87□□□□□ -0.03
TARDBP-217ENST00000616545 SLC4A9Q96Q91 983 aa14.87□□□□□ -0.03
TARDBP-217ENST00000616545 API5Q9BZZ5 524 aaKnown RBP14.87□□□□□ -0.03
TARDBP-217ENST00000616545 PRAMEF22A3QJZ6 481 aa14.86□□□□□ -0.03
TARDBP-217ENST00000616545 CANXP27824 592 aaKnown RBP14.86□□□□□ -0.03
TARDBP-217ENST00000616545 SF3B2Q13435 895 aaKnown RBP14.86□□□□□ -0.03
TARDBP-217ENST00000616545 RC3H1Q5TC82 1133 aaKnown RBP14.86□□□□□ -0.03
TARDBP-217ENST00000616545 PTF1AQ7RTS3 328 aa14.86□□□□□ -0.03
TARDBP-217ENST00000616545 BCL2L13Q9BXK5 485 aa14.86□□□□□ -0.03
TARDBP-217ENST00000616545 CHPF2Q9P2E5 772 aa14.86□□□□□ -0.03
TARDBP-217ENST00000616545 CCNL1Q9UK58 526 aaPredicted RBP14.86□□□□□ -0.03
TARDBP-217ENST00000616545 DDX58O95786 925 aaKnown RBP14.85□□□□□ -0.03
TARDBP-217ENST00000616545 APBA3O96018 575 aa14.85□□□□□ -0.03
TARDBP-217ENST00000616545 NEFLP07196 543 aa14.85□□□□□ -0.03
TARDBP-217ENST00000616545 PDIA6Q15084 440 aa14.85□□□□□ -0.03
TARDBP-217ENST00000616545 ATF7IPQ6VMQ6 1270 aa14.85□□□□□ -0.03
TARDBP-217ENST00000616545 NOB1Q9ULX3 412 aaKnown RBP14.85□□□□□ -0.03
TARDBP-217ENST00000616545 LY75O60449 1722 aa14.85□□□□□ -0.03
TARDBP-217ENST00000616545 CNTNAP4Q9C0A0 1308 aa14.85□□□□□ -0.03
TARDBP-217ENST00000616545 C5P01031 1676 aa14.84□□□□□ -0.03
TARDBP-217ENST00000616545 IL6STP40189 918 aaPredicted RBP14.84□□□□□ -0.03
TARDBP-217ENST00000616545 FLIIQ13045 1269 aa14.84□□□□□ -0.03
TARDBP-217ENST00000616545 NPM2Q86SE8 214 aaKnown RBP14.84□□□□□ -0.03
TARDBP-217ENST00000616545 NECTIN2Q92692 538 aa14.84□□□□□ -0.03
TARDBP-217ENST00000616545 FRAT1Q92837 279 aaPredicted RBP14.84□□□□□ -0.03
TARDBP-217ENST00000616545 CCDC87Q9NVE4 849 aa14.84□□□□□ -0.03
TARDBP-217ENST00000616545 ITPK1Q13572 414 aa14.83□□□□□ -0.04
TARDBP-217ENST00000616545 TJP1Q07157 1748 aa14.83□□□□□ -0.04
TARDBP-217ENST00000616545 RGPD3A6NKT7 1758 aaPredicted RBP14.83□□□□□ -0.04
TARDBP-217ENST00000616545 RGPD4Q7Z3J3 1758 aa14.83□□□□□ -0.04
TARDBP-217ENST00000616545 TCERG1O14776 1098 aaKnown RBP14.82□□□□□ -0.04
TARDBP-217ENST00000616545 A1BGP04217 495 aa14.82□□□□□ -0.04
TARDBP-217ENST00000616545 CRKLP46109 303 aaKnown RBP14.82□□□□□ -0.04
TARDBP-217ENST00000616545 LRP10Q7Z4F1 713 aa14.82□□□□□ -0.04
TARDBP-217ENST00000616545 DZIP1LQ8IYY4 767 aaKnown RBP14.82□□□□□ -0.04
TARDBP-217ENST00000616545 CHMP4BQ9H444 224 aaKnown RBP14.82□□□□□ -0.04
TARDBP-217ENST00000616545 A0A087WZG4 1122 aa14.81□□□□□ -0.04
TARDBP-217ENST00000616545 NBPF26B4DH59 902 aa14.81□□□□□ -0.04
TARDBP-217ENST00000616545 RGL2O15211 777 aa14.81□□□□□ -0.04
TARDBP-217ENST00000616545 TRIM27P14373 513 aa14.81□□□□□ -0.04
TARDBP-217ENST00000616545 BAG6P46379 1132 aa14.81□□□□□ -0.04
TARDBP-217ENST00000616545 FKBP5Q13451 457 aaPredicted RBP14.81□□□□□ -0.04
TARDBP-217ENST00000616545 TXNRD1Q16881 649 aa14.81□□□□□ -0.04
TARDBP-217ENST00000616545 NBPF14Q5TI25 921 aa14.81□□□□□ -0.04
TARDBP-217ENST00000616545 ERICH6BQ5W0A0 696 aa14.81□□□□□ -0.04
TARDBP-217ENST00000616545 NBPF10Q6P3W6 841 aaKnown RBP14.81□□□□□ -0.04
TARDBP-217ENST00000616545 INTS5Q6P9B9 1019 aaKnown RBP14.81□□□□□ -0.04
TARDBP-217ENST00000616545 FTSJ3Q8IY81 847 aaKnown RBP14.81□□□□□ -0.04
TARDBP-217ENST00000616545 NBPF15Q8N660 670 aa14.81□□□□□ -0.04
TARDBP-217ENST00000616545 MYL6BP14649 208 aa14.8□□□□□ -0.04
TARDBP-217ENST00000616545 AAMPQ13685 434 aa14.8□□□□□ -0.04
TARDBP-217ENST00000616545 KSR2Q6VAB6 950 aa14.8□□□□□ -0.04
TARDBP-217ENST00000616545 LINC00116Q8NCU8 138 aa14.8□□□□□ -0.04
TARDBP-217ENST00000616545 PHAXQ9H814 394 aaKnown RBP14.8□□□□□ -0.04
TARDBP-217ENST00000616545 TNS1Q9HBL0 1735 aaKnown RBP14.8□□□□□ -0.04
TARDBP-217ENST00000616545 ABCC4O15439 1325 aa14.79□□□□□ -0.04
TARDBP-217ENST00000616545 RPS6KA4O75676 772 aa14.79□□□□□ -0.04
TARDBP-217ENST00000616545 EIF5P55010 431 aaKnown RBP14.79□□□□□ -0.04
TARDBP-217ENST00000616545 PROSER3Q2NL68 480 aa14.79□□□□□ -0.04
TARDBP-217ENST00000616545 COPS6Q7L5N1 327 aa14.79□□□□□ -0.04
TARDBP-217ENST00000616545 G2E3Q7L622 706 aa14.79□□□□□ -0.04
TARDBP-217ENST00000616545 PLBD2Q8NHP8 589 aa14.79□□□□□ -0.04
TARDBP-217ENST00000616545 RREB1Q92766 1687 aa14.79□□□□□ -0.04
TARDBP-217ENST00000616545 ZBTB1Q9Y2K1 713 aa14.79□□□□□ -0.04
TARDBP-217ENST00000616545 COL5A3P25940 1745 aaPredicted RBP14.78□□□□□ -0.04
TARDBP-217ENST00000616545 PXDNLA1KZ92 1463 aa14.78□□□□□ -0.04
TARDBP-217ENST00000616545 IBTKQ9P2D0 1353 aaPredicted RBP14.78□□□□□ -0.04
TARDBP-217ENST00000616545 PLIN1O60240 522 aa14.78□□□□□ -0.04
TARDBP-217ENST00000616545 ADRA2BP18089 450 aa14.78□□□□□ -0.04
TARDBP-217ENST00000616545 CCT4P50991 539 aaKnown RBP14.78□□□□□ -0.04
TARDBP-217ENST00000616545 KIF6Q6ZMV9 814 aa14.78□□□□□ -0.04
TARDBP-217ENST00000616545 ANKRD13DQ6ZTN6 518 aa14.78□□□□□ -0.04
TARDBP-217ENST00000616545 XAGE3Q8WTP9 111 aa14.78□□□□□ -0.04
TARDBP-217ENST00000616545 ERVV-1B6SEH8 477 aa14.77□□□□□ -0.05
TARDBP-217ENST00000616545 ANXA1P04083 346 aa14.77□□□□□ -0.05
TARDBP-217ENST00000616545 INTS3Q68E01 1043 aaKnown RBP14.77□□□□□ -0.05
TARDBP-217ENST00000616545 PROM2Q8N271 834 aa14.77□□□□□ -0.05
TARDBP-217ENST00000616545 DNAAF4Q8WXU2 420 aa14.77□□□□□ -0.05
TARDBP-217ENST00000616545 AK7Q96M32 723 aa14.77□□□□□ -0.05
TARDBP-217ENST00000616545 CAMKK2Q96RR4 588 aa14.77□□□□□ -0.05
TARDBP-217ENST00000616545 LRRC4BQ9NT99 713 aa14.77□□□□□ -0.05
TARDBP-217ENST00000616545 RTCBQ9Y3I0 505 aaKnown RBP14.77□□□□□ -0.05
TARDBP-217ENST00000616545 PI4KAP2A4QPH2 592 aa14.76□□□□□ -0.05
TARDBP-217ENST00000616545 NEXNQ0ZGT2 675 aa14.76□□□□□ -0.05
TARDBP-217ENST00000616545 HSP90AB3PQ58FF7 597 aa14.76□□□□□ -0.05
TARDBP-217ENST00000616545 RIC3Q7Z5B4 369 aa14.76□□□□□ -0.05
TARDBP-217ENST00000616545 PI4KAP1Q8N8J0 262 aa14.76□□□□□ -0.05
TARDBP-217ENST00000616545 DDX19BQ9UMR2 479 aa14.76□□□□□ -0.05
TARDBP-217ENST00000616545 ATP10DQ9P241 1426 aa14.75□□□□□ -0.05
TARDBP-217ENST00000616545 MAP3K15Q6ZN16 1313 aa14.75□□□□□ -0.05
TARDBP-217ENST00000616545 AIMP1Q12904 312 aaKnown RBP14.75□□□□□ -0.05
TARDBP-217ENST00000616545 MVPQ14764 893 aaKnown RBP14.75□□□□□ -0.05
TARDBP-217ENST00000616545 FLAD1Q8NFF5 587 aa14.75□□□□□ -0.05
TARDBP-217ENST00000616545 TAF1LQ8IZX4 1826 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms