RNA–Protein interactions for RNA: ENST00000616383.1

MMP28-206, Transcript of matrix metallopeptidase 28, humanhuman

TSL 3

Gene MMP28, Length 696 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-206ENST00000616383 BTBD11A6QL63 1104 aa14.18□□□□□ -0.14
MMP28-206ENST00000616383 ERVV-2B6SEH9 535 aa14.18□□□□□ -0.14
MMP28-206ENST00000616383 MAP3K13O43283 966 aa14.18□□□□□ -0.14
MMP28-206ENST00000616383 CABP4P57796 275 aa14.18□□□□□ -0.14
MMP28-206ENST00000616383 RCAN3Q9UKA8 241 aa14.18□□□□□ -0.14
MMP28-206ENST00000616383 ONECUT3O60422 494 aaPredicted RBP14.17□□□□□ -0.14
MMP28-206ENST00000616383 RBM6P78332 1123 aaKnown RBP14.17□□□□□ -0.14
MMP28-206ENST00000616383 SEPT12Q8IYM1 358 aa14.17□□□□□ -0.14
MMP28-206ENST00000616383 NFATC2IPQ8NCF5 419 aa14.17□□□□□ -0.14
MMP28-206ENST00000616383 CACNA1FO60840 1977 aa14.16□□□□□ -0.14
MMP28-206ENST00000616383 BTAF1O14981 1849 aa14.16□□□□□ -0.14
MMP28-206ENST00000616383 POTEJP0CG39 1038 aa14.16□□□□□ -0.14
MMP28-206ENST00000616383 RXRBP28702 533 aa14.16□□□□□ -0.14
MMP28-206ENST00000616383 KRT24Q2M2I5 525 aa14.16□□□□□ -0.14
MMP28-206ENST00000616383 RASEFQ8IZ41 740 aa14.16□□□□□ -0.14
MMP28-206ENST00000616383 C8orf58Q8NAV2 365 aa14.16□□□□□ -0.14
MMP28-206ENST00000616383 BMP2KQ9NSY1 1161 aaPredicted RBP14.16□□□□□ -0.14
MMP28-206ENST00000616383 KCPQ6ZWJ8 1503 aa14.15□□□□□ -0.14
MMP28-206ENST00000616383 KCNQ3O43525 872 aa14.15□□□□□ -0.14
MMP28-206ENST00000616383 CT47B1P0C2W7 299 aaPredicted RBP14.15□□□□□ -0.14
MMP28-206ENST00000616383 TSPYL6Q8N831 410 aa14.15□□□□□ -0.14
MMP28-206ENST00000616383 TMOD3Q9NYL9 352 aa14.15□□□□□ -0.14
MMP28-206ENST00000616383 BCL9O00512 1426 aa14.15□□□□□ -0.14
MMP28-206ENST00000616383 ELL2O00472 640 aaPredicted RBP14.14□□□□□ -0.15
MMP28-206ENST00000616383 TWISTNBQ3B726 338 aaPredicted RBP14.14□□□□□ -0.15
MMP28-206ENST00000616383 RGS12O14924 1447 aa14.14□□□□□ -0.15
MMP28-206ENST00000616383 EIF4A1P60842 406 aaKnown RBP14.13□□□□□ -0.15
MMP28-206ENST00000616383 SLC39A6Q13433 755 aa14.13□□□□□ -0.15
MMP28-206ENST00000616383 ZNF790Q6PG37 636 aa14.13□□□□□ -0.15
MMP28-206ENST00000616383 TRPC6Q9Y210 931 aa14.13□□□□□ -0.15
MMP28-206ENST00000616383 SUPT16HQ9Y5B9 1047 aaKnown RBP14.13□□□□□ -0.15
MMP28-206ENST00000616383 TJP1Q07157 1748 aa14.12□□□□□ -0.15
MMP28-206ENST00000616383 SEC24BO95487 1268 aa14.12□□□□□ -0.15
MMP28-206ENST00000616383 TTC5Q8N0Z6 440 aa14.12□□□□□ -0.15
MMP28-206ENST00000616383 SYTL4Q96C24 671 aaPredicted RBP14.12□□□□□ -0.15
MMP28-206ENST00000616383 FAM163AQ96GL9 167 aaPredicted RBP14.12□□□□□ -0.15
MMP28-206ENST00000616383 ACSBG1Q96GR2 724 aa14.12□□□□□ -0.15
MMP28-206ENST00000616383 HEG1Q9ULI3 1381 aa14.11□□□□□ -0.15
MMP28-206ENST00000616383 VAMP4O75379 141 aa14.11□□□□□ -0.15
MMP28-206ENST00000616383 PRIM1P49642 420 aaKnown RBP14.11□□□□□ -0.15
MMP28-206ENST00000616383 RARSP54136 660 aaKnown RBP14.11□□□□□ -0.15
MMP28-206ENST00000616383 PIGBQ92521 554 aa14.11□□□□□ -0.15
MMP28-206ENST00000616383 CICQ96RK0 1608 aaPredicted RBP14.11□□□□□ -0.15
MMP28-206ENST00000616383 TIE1P35590 1138 aa14.1□□□□□ -0.15
MMP28-206ENST00000616383 FAM182BQ5T319 152 aa14.1□□□□□ -0.15
MMP28-206ENST00000616383 ZNF428Q96B54 188 aa14.1□□□□□ -0.15
MMP28-206ENST00000616383 BCL2L13Q9BXK5 485 aa14.1□□□□□ -0.15
MMP28-206ENST00000616383 SOS1Q07889 1333 aaPredicted RBP14.1□□□□□ -0.15
MMP28-206ENST00000616383 LY75O60449 1722 aa14.1□□□□□ -0.15
MMP28-206ENST00000616383 BCAR3O75815 825 aa14.09□□□□□ -0.15
MMP28-206ENST00000616383 KRT27Q7Z3Y8 459 aa14.09□□□□□ -0.15
MMP28-206ENST00000616383 SSH1Q8WYL5 1049 aa14.09□□□□□ -0.15
MMP28-206ENST00000616383 ZNF496Q96IT1 587 aaPredicted RBP14.09□□□□□ -0.15
MMP28-206ENST00000616383 SMC4Q9NTJ3 1288 aa14.09□□□□□ -0.15
MMP28-206ENST00000616383 ZNF831Q5JPB2 1677 aa14.09□□□□□ -0.15
MMP28-206ENST00000616383 RNF123Q5XPI4 1314 aa14.09□□□□□ -0.15
MMP28-206ENST00000616383 HOXB7P09629 217 aa14.08□□□□□ -0.16
MMP28-206ENST00000616383 RRP1P56182 461 aaKnown RBP14.08□□□□□ -0.16
MMP28-206ENST00000616383 ALDH1L2Q3SY69 923 aa14.08□□□□□ -0.16
MMP28-206ENST00000616383 FMNL2Q96PY5 1086 aa14.08□□□□□ -0.16
MMP28-206ENST00000616383 ASAP1Q9ULH1 1129 aa14.08□□□□□ -0.16
MMP28-206ENST00000616383 COL5A3P25940 1745 aaPredicted RBP14.07□□□□□ -0.16
MMP28-206ENST00000616383 TCERG1O14776 1098 aaKnown RBP14.07□□□□□ -0.16
MMP28-206ENST00000616383 KCNQ2O43526 872 aa14.07□□□□□ -0.16
MMP28-206ENST00000616383 GIGYF1O75420 1035 aaPredicted RBP14.07□□□□□ -0.16
MMP28-206ENST00000616383 ATG3Q9NT62 314 aa14.07□□□□□ -0.16
MMP28-206ENST00000616383 ZBTB47Q9UFB7 747 aaPredicted RBP14.07□□□□□ -0.16
MMP28-206ENST00000616383 TNS1Q9HBL0 1735 aaKnown RBP14.07□□□□□ -0.16
MMP28-206ENST00000616383 PRAMEF22A3QJZ6 481 aa14.06□□□□□ -0.16
MMP28-206ENST00000616383 N4BP2Q86UW6 1770 aaPredicted RBP14.06□□□□□ -0.16
MMP28-206ENST00000616383 PTCD1O75127 700 aaKnown RBP14.05□□□□□ -0.16
MMP28-206ENST00000616383 SNRPA1P09661 255 aaKnown RBP14.05□□□□□ -0.16
MMP28-206ENST00000616383 HDGFL1Q5TGJ6 251 aa14.05□□□□□ -0.16
MMP28-206ENST00000616383 MRPL50Q8N5N7 158 aaKnown RBP14.05□□□□□ -0.16
MMP28-206ENST00000616383 NECTIN2Q92692 538 aa14.05□□□□□ -0.16
MMP28-206ENST00000616383 PCDHB13Q9Y5F0 798 aa14.05□□□□□ -0.16
MMP28-206ENST00000616383 TAF1LQ8IZX4 1826 aa14.05□□□□□ -0.16
MMP28-206ENST00000616383 KIF16BQ96L93 1317 aa14.05□□□□□ -0.16
MMP28-206ENST00000616383 RREB1Q92766 1687 aa14.04□□□□□ -0.16
MMP28-206ENST00000616383 TTLL13PA6NNM8 815 aa14.04□□□□□ -0.16
MMP28-206ENST00000616383 PLIN1O60240 522 aa14.04□□□□□ -0.16
MMP28-206ENST00000616383 NEFLP07196 543 aa14.04□□□□□ -0.16
MMP28-206ENST00000616383 EIF2S2P20042 333 aaKnown RBP14.04□□□□□ -0.16
MMP28-206ENST00000616383 CANXP27824 592 aaKnown RBP14.04□□□□□ -0.16
MMP28-206ENST00000616383 CCDC30Q5VVM6 783 aa14.04□□□□□ -0.16
MMP28-206ENST00000616383 FAM196AQ6ZSG2 479 aa14.04□□□□□ -0.16
MMP28-206ENST00000616383 PTF1AQ7RTS3 328 aa14.04□□□□□ -0.16
MMP28-206ENST00000616383 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.04□□□□□ -0.16
MMP28-206ENST00000616383 STK31Q9BXU1 1019 aa14.04□□□□□ -0.16
MMP28-206ENST00000616383 PALLDQ8WX93 1383 aa14.04□□□□□ -0.16
MMP28-206ENST00000616383 SRCAPQ6ZRS2 3230 aa14.03□□□□□ -0.16
MMP28-206ENST00000616383 BRPF1P55201 1214 aaPredicted RBP14.03□□□□□ -0.16
MMP28-206ENST00000616383 FRAT1Q92837 279 aaPredicted RBP14.03□□□□□ -0.16
MMP28-206ENST00000616383 IRX6P78412 446 aaPredicted RBP14.02□□□□□ -0.17
MMP28-206ENST00000616383 SMARCC1Q92922 1105 aaPredicted RBP14.02□□□□□ -0.17
MMP28-206ENST00000616383 CHMP4AQ9BY43 222 aa14.02□□□□□ -0.17
MMP28-206ENST00000616383 CHPF2Q9P2E5 772 aa14.02□□□□□ -0.17
MMP28-206ENST00000616383 PCDH10Q9P2E7 1040 aa14.02□□□□□ -0.17
MMP28-206ENST00000616383 VSIG10Q8N0Z9 540 aa14.01□□□□□ -0.17
MMP28-206ENST00000616383 SLC4A9Q96Q91 983 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms