RNA–Protein interactions for RNA: ENST00000615877.4

NLRC3-204, Transcript of NLR family CARD domain containing 3, humanhuman

TSL 2

Gene NLRC3, Length 6,602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC3-204ENST00000615877 RAB11FIP3O75154 756 aa15.48■□□□□ 0.07
NLRC3-204ENST00000615877 WDHD1O75717 1129 aaPredicted RBP15.48■□□□□ 0.07
NLRC3-204ENST00000615877 ZNF692Q9BU19 519 aaPredicted RBP15.48■□□□□ 0.07
NLRC3-204ENST00000615877 WWC3Q9ULE0 1092 aa15.48■□□□□ 0.07
NLRC3-204ENST00000615877 NSD3Q9BZ95 1437 aa15.48■□□□□ 0.07
NLRC3-204ENST00000615877 CTAGE5O15320 804 aa15.48■□□□□ 0.07
NLRC3-204ENST00000615877 ANAPC15P60006 121 aa15.48■□□□□ 0.07
NLRC3-204ENST00000615877 CAVIN4Q5BKX8 364 aa15.48■□□□□ 0.07
NLRC3-204ENST00000615877 GTF2F1P35269 517 aaKnown RBP eCLIP15.48■□□□□ 0.07
NLRC3-204ENST00000615877 CKAP2LQ8IYA6 745 aa15.48■□□□□ 0.07
NLRC3-204ENST00000615877 KIF1BPQ96EK5 621 aa15.47■□□□□ 0.07
NLRC3-204ENST00000615877 TIAM1Q13009 1591 aa15.47■□□□□ 0.07
NLRC3-204ENST00000615877 MAP2K1Q02750 393 aaPredicted RBP15.47■□□□□ 0.07
NLRC3-204ENST00000615877 ALDH1L2Q3SY69 923 aa15.47■□□□□ 0.07
NLRC3-204ENST00000615877 TMX1Q9H3N1 280 aa15.46■□□□□ 0.07
NLRC3-204ENST00000615877 GLRX3O76003 335 aaKnown RBP15.46■□□□□ 0.07
NLRC3-204ENST00000615877 ZNF652Q9Y2D9 606 aa15.46■□□□□ 0.07
NLRC3-204ENST00000615877 LRPPRCP42704 1394 aaKnown RBP15.46■□□□□ 0.07
NLRC3-204ENST00000615877 DYDC1Q8WWB3 177 aa15.46■□□□□ 0.06
NLRC3-204ENST00000615877 RAPGEF3O95398 923 aa15.45■□□□□ 0.06
NLRC3-204ENST00000615877 DNA2P51530 1060 aa15.45■□□□□ 0.06
NLRC3-204ENST00000615877 GSDMDP57764 484 aa15.45■□□□□ 0.06
NLRC3-204ENST00000615877 SSH1Q8WYL5 1049 aa15.45■□□□□ 0.06
NLRC3-204ENST00000615877 DRC1Q96MC2 740 aa15.45■□□□□ 0.06
NLRC3-204ENST00000615877 RBM27Q9P2N5 1060 aaKnown RBP15.45■□□□□ 0.06
NLRC3-204ENST00000615877 EFCAB5A4FU69 1503 aa15.45■□□□□ 0.06
NLRC3-204ENST00000615877 UBE2Q2Q8WVN8 375 aa15.45■□□□□ 0.06
NLRC3-204ENST00000615877 DDX19AQ9NUU7 478 aaKnown RBP15.45■□□□□ 0.06
NLRC3-204ENST00000615877 LIMCH1Q9UPQ0 1083 aa15.45■□□□□ 0.06
NLRC3-204ENST00000615877 POTEB2H3BUK9 544 aa15.45■□□□□ 0.06
NLRC3-204ENST00000615877 BAG4O95429 457 aaKnown RBP15.45■□□□□ 0.06
NLRC3-204ENST00000615877 KLHL10Q6JEL2 608 aa15.45■□□□□ 0.06
NLRC3-204ENST00000615877 FAM107BQ9H098 131 aa15.45■□□□□ 0.06
NLRC3-204ENST00000615877 UVSSAQ2YD98 709 aa15.45■□□□□ 0.06
NLRC3-204ENST00000615877 MICALCLQ6ZW33 695 aa15.45■□□□□ 0.06
NLRC3-204ENST00000615877 NGLY1Q96IV0 654 aa15.45■□□□□ 0.06
NLRC3-204ENST00000615877 PRIMPOLQ96LW4 560 aa15.45■□□□□ 0.06
NLRC3-204ENST00000615877 RANBP6O60518 1105 aaKnown RBP15.44■□□□□ 0.06
NLRC3-204ENST00000615877 U3KPZ7 1027 aaPredicted RBP15.44■□□□□ 0.06
NLRC3-204ENST00000615877 DAPK1P53355 1430 aa15.44■□□□□ 0.06
NLRC3-204ENST00000615877 ZSCAN23Q3MJ62 389 aa15.44■□□□□ 0.06
NLRC3-204ENST00000615877 POTEJP0CG39 1038 aa15.44■□□□□ 0.06
NLRC3-204ENST00000615877 RNF187Q5TA31 235 aaPredicted RBP15.44■□□□□ 0.06
NLRC3-204ENST00000615877 ZNF622Q969S3 477 aaKnown RBP eCLIP15.44■□□□□ 0.06
NLRC3-204ENST00000615877 CCDC113Q9H0I3 377 aa15.44■□□□□ 0.06
NLRC3-204ENST00000615877 FKBP15Q5T1M5 1219 aa15.44■□□□□ 0.06
NLRC3-204ENST00000615877 GNAT3A8MTJ3 354 aa15.43■□□□□ 0.06
NLRC3-204ENST00000615877 GUCY1B3Q02153 619 aa15.43■□□□□ 0.06
NLRC3-204ENST00000615877 MCM10Q7L590 875 aa15.43■□□□□ 0.06
NLRC3-204ENST00000615877 GDPD2Q9HCC8 539 aa15.43■□□□□ 0.06
NLRC3-204ENST00000615877 TMC6Q7Z403 805 aa15.43■□□□□ 0.06
NLRC3-204ENST00000615877 CTNNBL1Q8WYA6 563 aaPredicted RBP15.43■□□□□ 0.06
NLRC3-204ENST00000615877 STX1AQ16623 288 aa15.43■□□□□ 0.06
NLRC3-204ENST00000615877 SUPT6HQ7KZ85 1726 aaKnown RBP15.43■□□□□ 0.06
NLRC3-204ENST00000615877 KLHL40Q2TBA0 621 aa15.43■□□□□ 0.06
NLRC3-204ENST00000615877 CEP135Q66GS9 1140 aa15.43■□□□□ 0.06
NLRC3-204ENST00000615877 SNW1Q13573 536 aaKnown RBP15.43■□□□□ 0.06
NLRC3-204ENST00000615877 C8orf76Q96K31 380 aa15.43■□□□□ 0.06
NLRC3-204ENST00000615877 GPTP24298 496 aa15.43■□□□□ 0.06
NLRC3-204ENST00000615877 C6orf229H3BNL8 230 aa15.42■□□□□ 0.06
NLRC3-204ENST00000615877 LUZP1Q86V48 1076 aa15.42■□□□□ 0.06
NLRC3-204ENST00000615877 CUL5Q93034 780 aa15.42■□□□□ 0.06
NLRC3-204ENST00000615877 NUP88Q99567 741 aaPredicted RBP15.42■□□□□ 0.06
NLRC3-204ENST00000615877 ZMYND15Q9H091 742 aa15.42■□□□□ 0.06
NLRC3-204ENST00000615877 ATAD2Q6PL18 1390 aa15.42■□□□□ 0.06
NLRC3-204ENST00000615877 DUSP27Q5VZP5 1158 aa15.42■□□□□ 0.06
NLRC3-204ENST00000615877 ZNF444Q8N0Y2 327 aaPredicted RBP15.42■□□□□ 0.06
NLRC3-204ENST00000615877 VAT1LQ9HCJ6 419 aa15.42■□□□□ 0.06
NLRC3-204ENST00000615877 BMS1Q14692 1282 aaKnown RBP15.42■□□□□ 0.06
NLRC3-204ENST00000615877 TBC1D32Q96NH3 1257 aa15.42■□□□□ 0.06
NLRC3-204ENST00000615877 GOPCQ9HD26 462 aa15.42■□□□□ 0.06
NLRC3-204ENST00000615877 PAXBP1Q9Y5B6 917 aa15.42■□□□□ 0.06
NLRC3-204ENST00000615877 GJB2P29033 226 aa15.42■□□□□ 0.06
NLRC3-204ENST00000615877 CCDC178Q5BJE1 867 aa15.41■□□□□ 0.06
NLRC3-204ENST00000615877 TBC1D9Q6ZT07 1266 aa15.41■□□□□ 0.06
NLRC3-204ENST00000615877 SMARCC1Q92922 1105 aaPredicted RBP15.41■□□□□ 0.06
NLRC3-204ENST00000615877 BOLA2Q9H3K6 86 aa15.41■□□□□ 0.06
NLRC3-204ENST00000615877 IFFO1Q0D2I5 559 aa15.41■□□□□ 0.06
NLRC3-204ENST00000615877 FSIP1Q8NA03 581 aa15.41■□□□□ 0.06
NLRC3-204ENST00000615877 CPLX3Q8WVH0 158 aa15.41■□□□□ 0.06
NLRC3-204ENST00000615877 THUMPD2Q9BTF0 503 aaKnown RBP15.41■□□□□ 0.06
NLRC3-204ENST00000615877 MACROD2A1Z1Q3 448 aa15.41■□□□□ 0.06
NLRC3-204ENST00000615877 CCDC91Q7Z6B0 441 aa15.41■□□□□ 0.06
NLRC3-204ENST00000615877 TICAM2Q86XR7 235 aa15.41■□□□□ 0.06
NLRC3-204ENST00000615877 VTI1AQ96AJ9 217 aa15.41■□□□□ 0.06
NLRC3-204ENST00000615877 COMMD10Q9Y6G5 202 aa15.41■□□□□ 0.06
NLRC3-204ENST00000615877 GOLGA6L10A0A0M3HER8 536 aa15.41■□□□□ 0.06
NLRC3-204ENST00000615877 SYNJ2O15056 1496 aa15.4■□□□□ 0.06
NLRC3-204ENST00000615877 STX6O43752 255 aa15.4■□□□□ 0.06
NLRC3-204ENST00000615877 HMGB1P09429 215 aaKnown RBP15.4■□□□□ 0.06
NLRC3-204ENST00000615877 CLCN1P35523 988 aa15.4■□□□□ 0.06
NLRC3-204ENST00000615877 CCDC144CPQ8IYA2 1237 aa15.4■□□□□ 0.06
NLRC3-204ENST00000615877 TRMT112Q9UI30 125 aaKnown RBP15.4■□□□□ 0.06
NLRC3-204ENST00000615877 HECW1Q76N89 1606 aa15.4■□□□□ 0.06
NLRC3-204ENST00000615877 ABCC11Q96J66 1382 aa15.4■□□□□ 0.06
NLRC3-204ENST00000615877 YEATS4O95619 227 aa15.4■□□□□ 0.06
NLRC3-204ENST00000615877 LRSAM1Q6UWE0 723 aa15.4■□□□□ 0.06
NLRC3-204ENST00000615877 BCCIPQ9P287 314 aaKnown RBP eCLIP15.4■□□□□ 0.06
NLRC3-204ENST00000615877 CACNA2D4Q7Z3S7 1137 aa15.4■□□□□ 0.06
NLRC3-204ENST00000615877 LMAN1P49257 510 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms