RNA–Protein interactions for RNA: ENST00000615335.4

FOXN3-219, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-219ENST00000615335 TSPYL6Q8N831 410 aa16.25■□□□□ 0.19
FOXN3-219ENST00000615335 MARCH10Q8NA82 808 aaPredicted RBP16.25■□□□□ 0.19
FOXN3-219ENST00000615335 SIPA1L3O60292 1781 aaPredicted RBP16.24■□□□□ 0.19
FOXN3-219ENST00000615335 CT47B1P0C2W7 299 aaPredicted RBP16.24■□□□□ 0.19
FOXN3-219ENST00000615335 BECN1Q14457 450 aa16.24■□□□□ 0.19
FOXN3-219ENST00000615335 TWISTNBQ3B726 338 aaPredicted RBP16.24■□□□□ 0.19
FOXN3-219ENST00000615335 BCL2L13Q9BXK5 485 aa16.24■□□□□ 0.19
FOXN3-219ENST00000615335 ONECUT3O60422 494 aaPredicted RBP16.23■□□□□ 0.19
FOXN3-219ENST00000615335 RLBP1P12271 317 aa16.23■□□□□ 0.19
FOXN3-219ENST00000615335 BCL11BQ9C0K0 894 aaPredicted RBP16.23■□□□□ 0.19
FOXN3-219ENST00000615335 KCNQ3O43525 872 aa16.23■□□□□ 0.19
FOXN3-219ENST00000615335 SLC39A6Q13433 755 aa16.23■□□□□ 0.19
FOXN3-219ENST00000615335 SEPT12Q8IYM1 358 aa16.23■□□□□ 0.19
FOXN3-219ENST00000615335 SYTL4Q96C24 671 aaPredicted RBP16.23■□□□□ 0.19
FOXN3-219ENST00000615335 TNNQ9UQP3 1299 aa16.23■□□□□ 0.19
FOXN3-219ENST00000615335 MRC1P22897 1456 aa16.23■□□□□ 0.19
FOXN3-219ENST00000615335 THSD7AQ9UPZ6 1657 aa16.22■□□□□ 0.19
FOXN3-219ENST00000615335 VAMP4O75379 141 aa16.22■□□□□ 0.19
FOXN3-219ENST00000615335 TMOD3Q9NYL9 352 aa16.22■□□□□ 0.19
FOXN3-219ENST00000615335 PCDHB15Q9Y5E8 787 aa16.22■□□□□ 0.19
FOXN3-219ENST00000615335 KDM3BQ7LBC6 1761 aa16.22■□□□□ 0.19
FOXN3-219ENST00000615335 ZNF790Q6PG37 636 aa16.21■□□□□ 0.19
FOXN3-219ENST00000615335 TOGARAM1Q9Y4F4 1720 aa16.21■□□□□ 0.19
FOXN3-219ENST00000615335 EIF4A1P60842 406 aaKnown RBP16.21■□□□□ 0.19
FOXN3-219ENST00000615335 RBM6P78332 1123 aaKnown RBP16.21■□□□□ 0.19
FOXN3-219ENST00000615335 MTERF4Q7Z6M4 381 aaKnown RBP16.21■□□□□ 0.19
FOXN3-219ENST00000615335 TTC5Q8N0Z6 440 aa16.21■□□□□ 0.19
FOXN3-219ENST00000615335 TAF7LQ5H9L4 462 aa16.2■□□□□ 0.18
FOXN3-219ENST00000615335 ACSBG1Q96GR2 724 aa16.2■□□□□ 0.18
FOXN3-219ENST00000615335 RWDD1Q9H446 243 aaPredicted RBP16.2■□□□□ 0.18
FOXN3-219ENST00000615335 PRIM1P49642 420 aaKnown RBP16.19■□□□□ 0.18
FOXN3-219ENST00000615335 ITGB4P16144 1822 aa16.19■□□□□ 0.18
FOXN3-219ENST00000615335 SEC24BO95487 1268 aa16.19■□□□□ 0.18
FOXN3-219ENST00000615335 PIGBQ92521 554 aa16.19■□□□□ 0.18
FOXN3-219ENST00000615335 ZNF428Q96B54 188 aa16.19■□□□□ 0.18
FOXN3-219ENST00000615335 TRIM44Q96DX7 344 aaPredicted RBP16.19■□□□□ 0.18
FOXN3-219ENST00000615335 SMC4Q9NTJ3 1288 aa16.19■□□□□ 0.18
FOXN3-219ENST00000615335 FAM182BQ5T319 152 aa16.18■□□□□ 0.18
FOXN3-219ENST00000615335 SSH1Q8WYL5 1049 aa16.18■□□□□ 0.18
FOXN3-219ENST00000615335 PDZRN3Q9UPQ7 1066 aa16.18■□□□□ 0.18
FOXN3-219ENST00000615335 MVPQ14764 893 aaKnown RBP16.18■□□□□ 0.18
FOXN3-219ENST00000615335 UTP14CQ5TAP6 766 aaKnown RBP16.18■□□□□ 0.18
FOXN3-219ENST00000615335 ZKSCAN2Q63HK3 967 aa16.18■□□□□ 0.18
FOXN3-219ENST00000615335 DOT1LQ8TEK3 1739 aa16.18■□□□□ 0.18
FOXN3-219ENST00000615335 PANK2Q9BZ23 570 aa16.18■□□□□ 0.18
FOXN3-219ENST00000615335 RXRBP28702 533 aa16.17■□□□□ 0.18
FOXN3-219ENST00000615335 KIAA1211Q6ZU35 1233 aa16.17■□□□□ 0.18
FOXN3-219ENST00000615335 RGS17Q9UGC6 210 aaPredicted RBP16.17■□□□□ 0.18
FOXN3-219ENST00000615335 ALDH1L2Q3SY69 923 aa16.16■□□□□ 0.18
FOXN3-219ENST00000615335 ILDR1Q86SU0 546 aaPredicted RBP16.16■□□□□ 0.18
FOXN3-219ENST00000615335 ZNF496Q96IT1 587 aaPredicted RBP16.16■□□□□ 0.18
FOXN3-219ENST00000615335 FTSJ3Q8IY81 847 aaKnown RBP16.16■□□□□ 0.18
FOXN3-219ENST00000615335 DZIP1LQ8IYY4 767 aaKnown RBP16.16■□□□□ 0.18
FOXN3-219ENST00000615335 BBXQ8WY36 941 aaPredicted RBP16.16■□□□□ 0.18
FOXN3-219ENST00000615335 NECTIN2Q92692 538 aa16.16■□□□□ 0.18
FOXN3-219ENST00000615335 BCL9O00512 1426 aa16.15■□□□□ 0.18
FOXN3-219ENST00000615335 FMNL2Q96PY5 1086 aa16.15■□□□□ 0.18
FOXN3-219ENST00000615335 PTCD1O75127 700 aaKnown RBP16.15■□□□□ 0.18
FOXN3-219ENST00000615335 GIGYF1O75420 1035 aaPredicted RBP16.15■□□□□ 0.18
FOXN3-219ENST00000615335 EIF2S2P20042 333 aaKnown RBP16.15■□□□□ 0.18
FOXN3-219ENST00000615335 UPF2Q9HAU5 1272 aaKnown RBP16.15■□□□□ 0.18
FOXN3-219ENST00000615335 ASAP1Q9ULH1 1129 aa16.15■□□□□ 0.18
FOXN3-219ENST00000615335 SOS1Q07889 1333 aaPredicted RBP16.14■□□□□ 0.17
FOXN3-219ENST00000615335 KCNQ2O43526 872 aa16.14■□□□□ 0.17
FOXN3-219ENST00000615335 HDGFL1Q5TGJ6 251 aa16.14■□□□□ 0.17
FOXN3-219ENST00000615335 POTEAQ6S8J7 498 aa16.14■□□□□ 0.17
FOXN3-219ENST00000615335 ERBB4Q15303 1308 aa16.13■□□□□ 0.17
FOXN3-219ENST00000615335 HEG1Q9ULI3 1381 aa16.13■□□□□ 0.17
FOXN3-219ENST00000615335 PRAMEF22A3QJZ6 481 aa16.13■□□□□ 0.17
FOXN3-219ENST00000615335 HOXB7P09629 217 aa16.13■□□□□ 0.17
FOXN3-219ENST00000615335 CCDC30Q5VVM6 783 aa16.13■□□□□ 0.17
FOXN3-219ENST00000615335 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.13■□□□□ 0.17
FOXN3-219ENST00000615335 KRT27Q7Z3Y8 459 aa16.13■□□□□ 0.17
FOXN3-219ENST00000615335 ATG3Q9NT62 314 aa16.13■□□□□ 0.17
FOXN3-219ENST00000615335 BRWD3Q6RI45 1802 aa16.13■□□□□ 0.17
FOXN3-219ENST00000615335 EP400Q96L91 3159 aa16.13■□□□□ 0.17
FOXN3-219ENST00000615335 GRPEL1Q9HAV7 217 aa16.13■□□□□ 0.17
FOXN3-219ENST00000615335 SNRPA1P09661 255 aaKnown RBP16.12■□□□□ 0.17
FOXN3-219ENST00000615335 MRPL50Q8N5N7 158 aaKnown RBP16.12■□□□□ 0.17
FOXN3-219ENST00000615335 STK31Q9BXU1 1019 aa16.12■□□□□ 0.17
FOXN3-219ENST00000615335 ANTXR1Q9H6X2 564 aa16.12■□□□□ 0.17
FOXN3-219ENST00000615335 SLC4A2P04920 1241 aa16.11■□□□□ 0.17
FOXN3-219ENST00000615335 CHMP4AQ9BY43 222 aa16.11■□□□□ 0.17
FOXN3-219ENST00000615335 NOB1Q9ULX3 412 aaKnown RBP16.11■□□□□ 0.17
FOXN3-219ENST00000615335 PAPPAQ13219 1627 aa16.11■□□□□ 0.17
FOXN3-219ENST00000615335 OFD1O75665 1012 aa16.11■□□□□ 0.17
FOXN3-219ENST00000615335 RBM42Q9BTD8 480 aaKnown RBP16.11■□□□□ 0.17
FOXN3-219ENST00000615335 NAP1L2Q9ULW6 460 aaPredicted RBP16.11■□□□□ 0.17
FOXN3-219ENST00000615335 KIF16BQ96L93 1317 aa16.1■□□□□ 0.17
FOXN3-219ENST00000615335 UBR2Q8IWV8 1755 aa16.1■□□□□ 0.17
FOXN3-219ENST00000615335 TBC1D32Q96NH3 1257 aa16.1■□□□□ 0.17
FOXN3-219ENST00000615335 ARXQ96QS3 562 aa16.1■□□□□ 0.17
FOXN3-219ENST00000615335 TRIM27P14373 513 aa16.09■□□□□ 0.17
FOXN3-219ENST00000615335 MCM4P33991 863 aa16.09■□□□□ 0.17
FOXN3-219ENST00000615335 BRPF1P55201 1214 aaPredicted RBP16.09■□□□□ 0.17
FOXN3-219ENST00000615335 KCPQ6ZWJ8 1503 aa16.09■□□□□ 0.17
FOXN3-219ENST00000615335 IPO8O15397 1037 aaKnown RBP16.09■□□□□ 0.17
FOXN3-219ENST00000615335 GTF2E1P29083 439 aaPredicted RBP16.09■□□□□ 0.17
FOXN3-219ENST00000615335 DDX19BQ9UMR2 479 aa16.09■□□□□ 0.17
FOXN3-219ENST00000615335 USP16Q9Y5T5 823 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms