RNA–Protein interactions for RNA: ENST00000615043.1

PCDH15-228, Transcript of protocadherin related 15, humanhuman

TSL 5

Gene PCDH15, Length 1,143 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15-228ENST00000615043 LRCH3Q96II8 777 aa13.22□□□□□ -0.29
PCDH15-228ENST00000615043 POLR3GLQ9BT43 218 aa13.22□□□□□ -0.29
PCDH15-228ENST00000615043 SOX11P35716 441 aa13.21□□□□□ -0.29
PCDH15-228ENST00000615043 DESI1Q6ICB0 168 aa13.21□□□□□ -0.29
PCDH15-228ENST00000615043 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.21□□□□□ -0.29
PCDH15-228ENST00000615043 TULP4Q9NRJ4 1543 aa13.21□□□□□ -0.29
PCDH15-228ENST00000615043 KCNA6P17658 529 aa13.2□□□□□ -0.3
PCDH15-228ENST00000615043 SIRT1Q96EB6 747 aa13.2□□□□□ -0.3
PCDH15-228ENST00000615043 PALM3A6NDB9 673 aaPredicted RBP13.19□□□□□ -0.3
PCDH15-228ENST00000615043 PNMA1Q8ND90 353 aa13.19□□□□□ -0.3
PCDH15-228ENST00000615043 NKTRP30414 1462 aaKnown RBP13.18□□□□□ -0.3
PCDH15-228ENST00000615043 STRCP1A6NGW2 1772 aa13.18□□□□□ -0.3
PCDH15-228ENST00000615043 SRPK2P78362 688 aaKnown RBP13.18□□□□□ -0.3
PCDH15-228ENST00000615043 SEMA3FQ13275 785 aa13.18□□□□□ -0.3
PCDH15-228ENST00000615043 LYPD8Q6UX82 237 aa13.18□□□□□ -0.3
PCDH15-228ENST00000615043 PRR14Q9BWN1 585 aa13.18□□□□□ -0.3
PCDH15-228ENST00000615043 ADGRB2O60241 1585 aa13.18□□□□□ -0.3
PCDH15-228ENST00000615043 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.18□□□□□ -0.3
PCDH15-228ENST00000615043 LMOD1P29536 600 aaPredicted RBP13.17□□□□□ -0.3
PCDH15-228ENST00000615043 CDCA8Q53HL2 280 aa13.17□□□□□ -0.3
PCDH15-228ENST00000615043 UCN2Q96RP3 112 aa13.17□□□□□ -0.3
PCDH15-228ENST00000615043 TFIP11Q9UBB9 837 aaKnown RBP13.17□□□□□ -0.3
PCDH15-228ENST00000615043 NALCNQ8IZF0 1738 aa13.16□□□□□ -0.3
PCDH15-228ENST00000615043 EVC2Q86UK5 1308 aa13.16□□□□□ -0.3
PCDH15-228ENST00000615043 RNF19BQ6ZMZ0 732 aa13.16□□□□□ -0.3
PCDH15-228ENST00000615043 NPM2Q86SE8 214 aaKnown RBP13.16□□□□□ -0.3
PCDH15-228ENST00000615043 MYOM1P52179 1685 aa13.15□□□□□ -0.3
PCDH15-228ENST00000615043 DDX10Q13206 875 aaKnown RBP13.15□□□□□ -0.3
PCDH15-228ENST00000615043 BLOC1S3Q6QNY0 202 aa13.15□□□□□ -0.3
PCDH15-228ENST00000615043 CSB-PGBD3P0DP91 1061 aa13.14□□□□□ -0.31
PCDH15-228ENST00000615043 ADGRD1Q6QNK2 874 aa13.14□□□□□ -0.31
PCDH15-228ENST00000615043 USB1Q9BQ65 265 aaKnown RBP13.14□□□□□ -0.31
PCDH15-228ENST00000615043 USTQ9Y2C2 406 aa13.13□□□□□ -0.31
PCDH15-228ENST00000615043 ADGRL3Q9HAR2 1447 aa13.13□□□□□ -0.31
PCDH15-228ENST00000615043 CDC42BPGQ6DT37 1551 aa13.12□□□□□ -0.31
PCDH15-228ENST00000615043 WASLO00401 505 aaPredicted RBP13.12□□□□□ -0.31
PCDH15-228ENST00000615043 CDK19Q9BWU1 502 aa13.12□□□□□ -0.31
PCDH15-228ENST00000615043 SALL2Q9Y467 1007 aaPredicted RBP13.12□□□□□ -0.31
PCDH15-228ENST00000615043 ZNF335Q9H4Z2 1342 aaPredicted RBP13.12□□□□□ -0.31
PCDH15-228ENST00000615043 PPP4CP60510 307 aa13.11□□□□□ -0.31
PCDH15-228ENST00000615043 NR1H3Q13133 447 aa13.11□□□□□ -0.31
PCDH15-228ENST00000615043 DIEXFQ68CQ4 756 aaKnown RBP13.11□□□□□ -0.31
PCDH15-228ENST00000615043 BRICD5Q6PL45 260 aa13.11□□□□□ -0.31
PCDH15-228ENST00000615043 ANKK1Q8NFD2 765 aa13.11□□□□□ -0.31
PCDH15-228ENST00000615043 HS3ST6Q96QI5 342 aa13.11□□□□□ -0.31
PCDH15-228ENST00000615043 FMN2Q9NZ56 1722 aa13.1□□□□□ -0.31
PCDH15-228ENST00000615043 ATAD2Q6PL18 1390 aa13.1□□□□□ -0.31
PCDH15-228ENST00000615043 LSM11P83369 360 aaKnown RBP eCLIP13.1□□□□□ -0.31
PCDH15-228ENST00000615043 LHX8Q68G74 356 aa13.1□□□□□ -0.31
PCDH15-228ENST00000615043 TMEM94Q12767 1356 aa13.09□□□□□ -0.31
PCDH15-228ENST00000615043 POTEB3A0JP26 581 aa13.09□□□□□ -0.31
PCDH15-228ENST00000615043 GOLGA8CPA6NN73 597 aa13.09□□□□□ -0.31
PCDH15-228ENST00000615043 HRO43593 1189 aa13.09□□□□□ -0.31
PCDH15-228ENST00000615043 POTEBQ6S5H4 581 aa13.09□□□□□ -0.31
PCDH15-228ENST00000615043 TBC1D9Q6ZT07 1266 aa13.09□□□□□ -0.31
PCDH15-228ENST00000615043 SCUBE3Q8IX30 993 aa13.09□□□□□ -0.31
PCDH15-228ENST00000615043 PUS7Q96PZ0 661 aaKnown RBP13.09□□□□□ -0.31
PCDH15-228ENST00000615043 GZF1Q9H116 711 aaPredicted RBP13.09□□□□□ -0.31
PCDH15-228ENST00000615043 HPS5Q9UPZ3 1129 aa13.09□□□□□ -0.31
PCDH15-228ENST00000615043 MAFBQ9Y5Q3 323 aaPredicted RBP13.09□□□□□ -0.31
PCDH15-228ENST00000615043 ATP7BP35670 1465 aa13.09□□□□□ -0.31
PCDH15-228ENST00000615043 TOPAZ1Q8N9V7 1692 aa13.08□□□□□ -0.31
PCDH15-228ENST00000615043 APLP1P51693 650 aa13.08□□□□□ -0.32
PCDH15-228ENST00000615043 TMC1Q8TDI8 760 aa13.08□□□□□ -0.32
PCDH15-228ENST00000615043 FKBPLQ9UIM3 349 aa13.08□□□□□ -0.32
PCDH15-228ENST00000615043 USP32Q8NFA0 1604 aa13.08□□□□□ -0.32
PCDH15-228ENST00000615043 XIRP1Q702N8 1843 aaKnown RBP13.08□□□□□ -0.32
PCDH15-228ENST00000615043 LRRC7Q96NW7 1537 aa13.08□□□□□ -0.32
PCDH15-228ENST00000615043 ITSN1Q15811 1721 aa13.08□□□□□ -0.32
PCDH15-228ENST00000615043 SOWAHBA6NEL2 793 aa13.07□□□□□ -0.32
PCDH15-228ENST00000615043 FMNL1O95466 1100 aaPredicted RBP13.07□□□□□ -0.32
PCDH15-228ENST00000615043 FBXO45P0C2W1 286 aa13.07□□□□□ -0.32
PCDH15-228ENST00000615043 PCDHB3Q9Y5E6 796 aa13.07□□□□□ -0.32
PCDH15-228ENST00000615043 NINLQ9Y2I6 1382 aa13.07□□□□□ -0.32
PCDH15-228ENST00000615043 NCOA3Q9Y6Q9 1424 aa13.06□□□□□ -0.32
PCDH15-228ENST00000615043 ZBBXA8MT70 800 aa13.06□□□□□ -0.32
PCDH15-228ENST00000615043 NR1I2O75469 434 aa13.06□□□□□ -0.32
PCDH15-228ENST00000615043 F12P00748 615 aaPredicted RBP13.06□□□□□ -0.32
PCDH15-228ENST00000615043 NUDT16Q96DE0 195 aaKnown RBP13.06□□□□□ -0.32
PCDH15-228ENST00000615043 PRR36Q9H6K5 1346 aa13.06□□□□□ -0.32
PCDH15-228ENST00000615043 PPIP5K1Q6PFW1 1433 aa13.05□□□□□ -0.32
PCDH15-228ENST00000615043 RGPD8O14715 1765 aaPredicted RBP13.05□□□□□ -0.32
PCDH15-228ENST00000615043 PATL2C9JE40 543 aaKnown RBP13.05□□□□□ -0.32
PCDH15-228ENST00000615043 ATP9BO43861 1147 aa13.05□□□□□ -0.32
PCDH15-228ENST00000615043 BRD1O95696 1058 aa13.05□□□□□ -0.32
PCDH15-228ENST00000615043 JUNDP17535 347 aa13.05□□□□□ -0.32
PCDH15-228ENST00000615043 BCAMP50895 628 aa13.05□□□□□ -0.32
PCDH15-228ENST00000615043 THAP11Q96EK4 314 aa13.05□□□□□ -0.32
PCDH15-228ENST00000615043 PANK3Q9H999 370 aa13.05□□□□□ -0.32
PCDH15-228ENST00000615043 TSR3Q9UJK0 312 aaKnown RBP13.05□□□□□ -0.32
PCDH15-228ENST00000615043 ANKARQ7Z5J8 1434 aa13.05□□□□□ -0.32
PCDH15-228ENST00000615043 CARNS1A5YM72 827 aa13.04□□□□□ -0.32
PCDH15-228ENST00000615043 ATG7O95352 703 aa13.04□□□□□ -0.32
PCDH15-228ENST00000615043 PTPRNQ16849 979 aa13.04□□□□□ -0.32
PCDH15-228ENST00000615043 TMCO4Q5TGY1 634 aa13.04□□□□□ -0.32
PCDH15-228ENST00000615043 SLC12A5Q9H2X9 1139 aa13.04□□□□□ -0.32
PCDH15-228ENST00000615043 MAP10Q9P2G4 905 aa13.04□□□□□ -0.32
PCDH15-228ENST00000615043 MSH6P52701 1360 aa13.04□□□□□ -0.32
PCDH15-228ENST00000615043 LTBP4Q8N2S1 1624 aa13.03□□□□□ -0.32
PCDH15-228ENST00000615043 C19orf44Q9H6X5 657 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms