RNA–Protein interactions for RNA: ENST00000614478.1

GEN1-208, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

Gene GEN1, Length 1,864 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-208ENST00000614478 SBF2Q86WG5 1849 aa22.38■■□□□ 1.17
GEN1-208ENST00000614478 FLIIQ13045 1269 aa22.38■■□□□ 1.17
GEN1-208ENST00000614478 SLC39A6Q13433 755 aa22.38■■□□□ 1.17
GEN1-208ENST00000614478 GIGYF1O75420 1035 aaPredicted RBP22.37■■□□□ 1.17
GEN1-208ENST00000614478 CABP4P57796 275 aa22.37■■□□□ 1.17
GEN1-208ENST00000614478 SKAP1Q86WV1 359 aa22.37■■□□□ 1.17
GEN1-208ENST00000614478 BCL9O00512 1426 aa22.37■■□□□ 1.17
GEN1-208ENST00000614478 NKX1-1Q15270 411 aaPredicted RBP22.36■■□□□ 1.17
GEN1-208ENST00000614478 F6X3S4 739 aa22.34■■□□□ 1.17
GEN1-208ENST00000614478 FKBP5Q13451 457 aaPredicted RBP22.34■■□□□ 1.17
GEN1-208ENST00000614478 DOT1LQ8TEK3 1739 aa22.34■■□□□ 1.17
GEN1-208ENST00000614478 HDAC1Q13547 482 aaPredicted RBP22.34■■□□□ 1.17
GEN1-208ENST00000614478 CHPF2Q9P2E5 772 aa22.34■■□□□ 1.17
GEN1-208ENST00000614478 FAM182BQ5T319 152 aa22.33■■□□□ 1.17
GEN1-208ENST00000614478 FAM196AQ6ZSG2 479 aa22.33■■□□□ 1.17
GEN1-208ENST00000614478 PRAMEF22A3QJZ6 481 aa22.32■■□□□ 1.16
GEN1-208ENST00000614478 ERVV-2B6SEH9 535 aa22.32■■□□□ 1.16
GEN1-208ENST00000614478 SLC4A10Q6U841 1118 aa22.32■■□□□ 1.16
GEN1-208ENST00000614478 TTC5Q8N0Z6 440 aa22.32■■□□□ 1.16
GEN1-208ENST00000614478 PHAXQ9H814 394 aaKnown RBP22.32■■□□□ 1.16
GEN1-208ENST00000614478 ITGB4P16144 1822 aa22.32■■□□□ 1.16
GEN1-208ENST00000614478 TOGARAM1Q9Y4F4 1720 aa22.32■■□□□ 1.16
GEN1-208ENST00000614478 CCT4P50991 539 aaKnown RBP22.31■■□□□ 1.16
GEN1-208ENST00000614478 C1orf115Q9H7X2 142 aa22.31■■□□□ 1.16
GEN1-208ENST00000614478 ZNF496Q96IT1 587 aaPredicted RBP22.3■■□□□ 1.16
GEN1-208ENST00000614478 DBF4Q9UBU7 674 aaPredicted RBP22.3■■□□□ 1.16
GEN1-208ENST00000614478 ILDR2Q71H61 639 aa22.3■■□□□ 1.16
GEN1-208ENST00000614478 NHSQ6T4R5 1651 aa22.29■■□□□ 1.16
GEN1-208ENST00000614478 ANXA1P04083 346 aa22.28■■□□□ 1.16
GEN1-208ENST00000614478 FMNL2Q96PY5 1086 aa22.28■■□□□ 1.16
GEN1-208ENST00000614478 C5P01031 1676 aa22.27■■□□□ 1.16
GEN1-208ENST00000614478 RGS3P49796 1198 aa22.26■■□□□ 1.15
GEN1-208ENST00000614478 SNRPA1P09661 255 aaKnown RBP22.26■■□□□ 1.15
GEN1-208ENST00000614478 MEIS3Q99687 375 aa22.26■■□□□ 1.15
GEN1-208ENST00000614478 PDZRN3Q9UPQ7 1066 aa22.25■■□□□ 1.15
GEN1-208ENST00000614478 PROSER3Q2NL68 480 aa22.24■■□□□ 1.15
GEN1-208ENST00000614478 HYPKQ9NX55 129 aa22.24■■□□□ 1.15
GEN1-208ENST00000614478 PXDNLA1KZ92 1463 aa22.24■■□□□ 1.15
GEN1-208ENST00000614478 SMC5Q8IY18 1101 aa22.24■■□□□ 1.15
GEN1-208ENST00000614478 DDX21Q9NR30 783 aaKnown RBP eCLIP22.24■■□□□ 1.15
GEN1-208ENST00000614478 BTAF1O14981 1849 aa22.23■■□□□ 1.15
GEN1-208ENST00000614478 TNS1Q9HBL0 1735 aaKnown RBP22.23■■□□□ 1.15
GEN1-208ENST00000614478 SIRT2Q8IXJ6 389 aa22.23■■□□□ 1.15
GEN1-208ENST00000614478 ACSBG1Q96GR2 724 aa22.23■■□□□ 1.15
GEN1-208ENST00000614478 PDIA6Q15084 440 aa22.22■■□□□ 1.15
GEN1-208ENST00000614478 USP16Q9Y5T5 823 aa22.22■■□□□ 1.15
GEN1-208ENST00000614478 PI4KAP2A4QPH2 592 aa22.22■■□□□ 1.15
GEN1-208ENST00000614478 PRIM1P49642 420 aaKnown RBP22.22■■□□□ 1.15
GEN1-208ENST00000614478 PI4KAP1Q8N8J0 262 aa22.22■■□□□ 1.15
GEN1-208ENST00000614478 TMOD3Q9NYL9 352 aa22.22■■□□□ 1.15
GEN1-208ENST00000614478 N4BP2Q86UW6 1770 aaPredicted RBP22.21■■□□□ 1.15
GEN1-208ENST00000614478 TRIM37O94972 964 aa22.21■■□□□ 1.15
GEN1-208ENST00000614478 SYTL4Q96C24 671 aaPredicted RBP22.21■■□□□ 1.15
GEN1-208ENST00000614478 BCL11BQ9C0K0 894 aaPredicted RBP22.21■■□□□ 1.15
GEN1-208ENST00000614478 PAPPAQ13219 1627 aa22.21■■□□□ 1.15
GEN1-208ENST00000614478 KCNQ2O43526 872 aa22.2■■□□□ 1.14
GEN1-208ENST00000614478 DNAAF4Q8WXU2 420 aa22.2■■□□□ 1.14
GEN1-208ENST00000614478 UBR2Q8IWV8 1755 aa22.2■■□□□ 1.14
GEN1-208ENST00000614478 ADCY9O60503 1353 aa22.19■■□□□ 1.14
GEN1-208ENST00000614478 PDE4AP27815 886 aa22.19■■□□□ 1.14
GEN1-208ENST00000614478 RPAP2Q8IXW5 612 aaPredicted RBP22.19■■□□□ 1.14
GEN1-208ENST00000614478 ANKRD44Q8N8A2 993 aa22.19■■□□□ 1.14
GEN1-208ENST00000614478 BACH2Q9BYV9 841 aa22.19■■□□□ 1.14
GEN1-208ENST00000614478 ATP10DQ9P241 1426 aa22.18■■□□□ 1.14
GEN1-208ENST00000614478 SRCIN1Q9C0H9 1055 aa22.18■■□□□ 1.14
GEN1-208ENST00000614478 KCPQ6ZWJ8 1503 aa22.18■■□□□ 1.14
GEN1-208ENST00000614478 GNAI3P08754 354 aa22.17■■□□□ 1.14
GEN1-208ENST00000614478 CEP85Q6P2H3 762 aa22.17■■□□□ 1.14
GEN1-208ENST00000614478 KSR2Q6VAB6 950 aa22.17■■□□□ 1.14
GEN1-208ENST00000614478 GCC1Q96CN9 775 aa22.17■■□□□ 1.14
GEN1-208ENST00000614478 MYL6BP14649 208 aa22.17■■□□□ 1.14
GEN1-208ENST00000614478 BEND3Q5T5X7 828 aa22.17■■□□□ 1.14
GEN1-208ENST00000614478 CCDC125Q86Z20 511 aa22.17■■□□□ 1.14
GEN1-208ENST00000614478 PIGBQ92521 554 aa22.17■■□□□ 1.14
GEN1-208ENST00000614478 PTCD1O75127 700 aaKnown RBP22.16■■□□□ 1.14
GEN1-208ENST00000614478 GNAI2P04899 355 aa22.16■■□□□ 1.14
GEN1-208ENST00000614478 AIMP1Q12904 312 aaKnown RBP22.16■■□□□ 1.14
GEN1-208ENST00000614478 MAP3K2Q9Y2U5 619 aa22.16■■□□□ 1.14
GEN1-208ENST00000614478 LAMB4A4D0S4 1761 aa22.16■■□□□ 1.14
GEN1-208ENST00000614478 DDX58O95786 925 aaKnown RBP22.15■■□□□ 1.14
GEN1-208ENST00000614478 PTF1AQ7RTS3 328 aa22.15■■□□□ 1.14
GEN1-208ENST00000614478 USP44Q9H0E7 712 aa22.15■■□□□ 1.14
GEN1-208ENST00000614478 NUCB1Q02818 461 aa22.15■■□□□ 1.14
GEN1-208ENST00000614478 RGPD3A6NKT7 1758 aaPredicted RBP22.15■■□□□ 1.14
GEN1-208ENST00000614478 RGPD4Q7Z3J3 1758 aa22.15■■□□□ 1.14
GEN1-208ENST00000614478 PIP4K2AP48426 406 aaPredicted RBP22.13■■□□□ 1.13
GEN1-208ENST00000614478 SF3B2Q13435 895 aaKnown RBP22.13■■□□□ 1.13
GEN1-208ENST00000614478 LRP10Q7Z4F1 713 aa22.13■■□□□ 1.13
GEN1-208ENST00000614478 ASAP1Q9ULH1 1129 aa22.13■■□□□ 1.13
GEN1-208ENST00000614478 COPS6Q7L5N1 327 aa22.13■■□□□ 1.13
GEN1-208ENST00000614478 XAGE3Q8WTP9 111 aa22.13■■□□□ 1.13
GEN1-208ENST00000614478 LY75O60449 1722 aa22.12■■□□□ 1.13
GEN1-208ENST00000614478 UPF1Q92900 1129 aaKnown RBP eCLIP22.12■■□□□ 1.13
GEN1-208ENST00000614478 ATG3Q9NT62 314 aa22.12■■□□□ 1.13
GEN1-208ENST00000614478 UBTFL1P0CB47 393 aaPredicted RBP22.11■■□□□ 1.13
GEN1-208ENST00000614478 ANKRD45Q5TZF3 282 aa22.11■■□□□ 1.13
GEN1-208ENST00000614478 CHD1LQ86WJ1 897 aa22.11■■□□□ 1.13
GEN1-208ENST00000614478 DCTPP1Q9H773 170 aa22.11■■□□□ 1.13
GEN1-208ENST00000614478 ERBB4Q15303 1308 aa22.11■■□□□ 1.13
GEN1-208ENST00000614478 RIC3Q7Z5B4 369 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 133.9 ms