RNA–Protein interactions for RNA: ENST00000614256.4

CHTOP-207, Transcript of chromatin target of PRMT1, humanhuman

TSL 3 BASIC

Gene CHTOP, Length 1,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-207ENST00000614256 PROSER3Q2NL68 480 aa23.93■■□□□ 1.42
CHTOP-207ENST00000614256 ZKSCAN2Q63HK3 967 aa23.93■■□□□ 1.42
CHTOP-207ENST00000614256 FAM196AQ6ZSG2 479 aa23.93■■□□□ 1.42
CHTOP-207ENST00000614256 CICQ96RK0 1608 aaPredicted RBP23.92■■□□□ 1.42
CHTOP-207ENST00000614256 TRIM27P14373 513 aa23.92■■□□□ 1.42
CHTOP-207ENST00000614256 LY75O60449 1722 aa23.92■■□□□ 1.42
CHTOP-207ENST00000614256 RLBP1P12271 317 aa23.91■■□□□ 1.42
CHTOP-207ENST00000614256 PDIA6Q15084 440 aa23.91■■□□□ 1.42
CHTOP-207ENST00000614256 VSIG10Q8N0Z9 540 aa23.91■■□□□ 1.42
CHTOP-207ENST00000614256 CLUAP1Q96AJ1 413 aa23.91■■□□□ 1.42
CHTOP-207ENST00000614256 ATF7IPQ6VMQ6 1270 aa23.91■■□□□ 1.42
CHTOP-207ENST00000614256 DNAJC10Q8IXB1 793 aa23.91■■□□□ 1.42
CHTOP-207ENST00000614256 PANK1Q8TE04 598 aa23.91■■□□□ 1.42
CHTOP-207ENST00000614256 PHAXQ9H814 394 aaKnown RBP23.91■■□□□ 1.42
CHTOP-207ENST00000614256 ZNF831Q5JPB2 1677 aa23.9■■□□□ 1.42
CHTOP-207ENST00000614256 PIP4K2AP48426 406 aaPredicted RBP23.9■■□□□ 1.42
CHTOP-207ENST00000614256 DBF4Q9UBU7 674 aaPredicted RBP23.89■■□□□ 1.42
CHTOP-207ENST00000614256 COL5A3P25940 1745 aaPredicted RBP23.89■■□□□ 1.41
CHTOP-207ENST00000614256 LOC102724428A0A0B4J2F2 783 aa23.88■■□□□ 1.41
CHTOP-207ENST00000614256 IPO8O15397 1037 aaKnown RBP23.88■■□□□ 1.41
CHTOP-207ENST00000614256 SIK1P57059 783 aa23.88■■□□□ 1.41
CHTOP-207ENST00000614256 ARHGAP45Q92619 1136 aa23.88■■□□□ 1.41
CHTOP-207ENST00000614256 SMARCC1Q92922 1105 aaPredicted RBP23.88■■□□□ 1.41
CHTOP-207ENST00000614256 BCL11BQ9C0K0 894 aaPredicted RBP23.88■■□□□ 1.41
CHTOP-207ENST00000614256 TRIM37O94972 964 aa23.87■■□□□ 1.41
CHTOP-207ENST00000614256 FLIIQ13045 1269 aa23.87■■□□□ 1.41
CHTOP-207ENST00000614256 PDE3AQ14432 1141 aa23.87■■□□□ 1.41
CHTOP-207ENST00000614256 CRBNQ96SW2 442 aa23.87■■□□□ 1.41
CHTOP-207ENST00000614256 CHMP4AQ9BY43 222 aa23.87■■□□□ 1.41
CHTOP-207ENST00000614256 DDX21Q9NR30 783 aaKnown RBP eCLIP23.87■■□□□ 1.41
CHTOP-207ENST00000614256 MYH14Q7Z406 1995 aaKnown RBP23.87■■□□□ 1.41
CHTOP-207ENST00000614256 A1BGP04217 495 aa23.87■■□□□ 1.41
CHTOP-207ENST00000614256 NBPF26B4DH59 902 aa23.86■■□□□ 1.41
CHTOP-207ENST00000614256 NBPF14Q5TI25 921 aa23.86■■□□□ 1.41
CHTOP-207ENST00000614256 NBPF10Q6P3W6 841 aaKnown RBP23.86■■□□□ 1.41
CHTOP-207ENST00000614256 LRP10Q7Z4F1 713 aa23.86■■□□□ 1.41
CHTOP-207ENST00000614256 DZIP1LQ8IYY4 767 aaKnown RBP23.86■■□□□ 1.41
CHTOP-207ENST00000614256 NBPF15Q8N660 670 aa23.86■■□□□ 1.41
CHTOP-207ENST00000614256 EXOC6Q8TAG9 804 aa23.86■■□□□ 1.41
CHTOP-207ENST00000614256 TAF1LQ8IZX4 1826 aa23.85■■□□□ 1.41
CHTOP-207ENST00000614256 PTPRCP08575 1304 aa23.85■■□□□ 1.41
CHTOP-207ENST00000614256 MYL6BP14649 208 aa23.85■■□□□ 1.41
CHTOP-207ENST00000614256 ITPK1Q13572 414 aa23.85■■□□□ 1.41
CHTOP-207ENST00000614256 ATP6V1AP38606 617 aa23.84■■□□□ 1.41
CHTOP-207ENST00000614256 KCNQ4P56696 695 aa23.84■■□□□ 1.41
CHTOP-207ENST00000614256 CYP19A1P11511 503 aaPredicted RBP23.84■■□□□ 1.41
CHTOP-207ENST00000614256 TEX13AQ9BXU3 409 aaPredicted RBP23.84■■□□□ 1.41
CHTOP-207ENST00000614256 COG6Q9Y2V7 657 aa23.84■■□□□ 1.41
CHTOP-207ENST00000614256 TNS1Q9HBL0 1735 aaKnown RBP23.84■■□□□ 1.41
CHTOP-207ENST00000614256 RREB1Q92766 1687 aa23.84■■□□□ 1.41
CHTOP-207ENST00000614256 ABCC4O15439 1325 aa23.83■■□□□ 1.41
CHTOP-207ENST00000614256 FKBP5Q13451 457 aaPredicted RBP23.82■■□□□ 1.4
CHTOP-207ENST00000614256 FTSJ3Q8IY81 847 aaKnown RBP23.82■■□□□ 1.4
CHTOP-207ENST00000614256 API5Q9BZZ5 524 aaKnown RBP23.82■■□□□ 1.4
CHTOP-207ENST00000614256 HYPKQ9NX55 129 aa23.82■■□□□ 1.4
CHTOP-207ENST00000614256 N4BP2Q86UW6 1770 aaPredicted RBP23.82■■□□□ 1.4
CHTOP-207ENST00000614256 ERBB4Q15303 1308 aa23.82■■□□□ 1.4
CHTOP-207ENST00000614256 F6X3S4 739 aa23.82■■□□□ 1.4
CHTOP-207ENST00000614256 TMEM57Q8N5G2 664 aa23.82■■□□□ 1.4
CHTOP-207ENST00000614256 STARD3NLO95772 234 aa23.8■■□□□ 1.4
CHTOP-207ENST00000614256 AIMP1Q12904 312 aaKnown RBP23.79■■□□□ 1.4
CHTOP-207ENST00000614256 XAGE3Q8WTP9 111 aa23.79■■□□□ 1.4
CHTOP-207ENST00000614256 ADCY9O60503 1353 aa23.79■■□□□ 1.4
CHTOP-207ENST00000614256 ARFGEF2Q9Y6D5 1785 aa23.79■■□□□ 1.4
CHTOP-207ENST00000614256 MS4A1P11836 297 aa23.78■■□□□ 1.4
CHTOP-207ENST00000614256 ZBTB1Q9Y2K1 713 aa23.78■■□□□ 1.4
CHTOP-207ENST00000614256 NUP188Q5SRE5 1749 aa23.78■■□□□ 1.4
CHTOP-207ENST00000614256 MVPQ14764 893 aaKnown RBP23.77■■□□□ 1.4
CHTOP-207ENST00000614256 COPS6Q7L5N1 327 aa23.77■■□□□ 1.4
CHTOP-207ENST00000614256 LINC00116Q8NCU8 138 aa23.77■■□□□ 1.4
CHTOP-207ENST00000614256 PI4KAP2A4QPH2 592 aa23.76■■□□□ 1.39
CHTOP-207ENST00000614256 CRKLP46109 303 aaKnown RBP23.76■■□□□ 1.39
CHTOP-207ENST00000614256 INTS5Q6P9B9 1019 aaKnown RBP23.76■■□□□ 1.39
CHTOP-207ENST00000614256 PI4KAP1Q8N8J0 262 aa23.76■■□□□ 1.39
CHTOP-207ENST00000614256 CCNL1Q9UK58 526 aaPredicted RBP23.76■■□□□ 1.39
CHTOP-207ENST00000614256 ITPRIPQ8IWB1 547 aa23.75■■□□□ 1.39
CHTOP-207ENST00000614256 SLC4A10Q6U841 1118 aa23.75■■□□□ 1.39
CHTOP-207ENST00000614256 TTLL7Q6ZT98 887 aa23.74■■□□□ 1.39
CHTOP-207ENST00000614256 LRRC4BQ9NT99 713 aa23.74■■□□□ 1.39
CHTOP-207ENST00000614256 CCDC87Q9NVE4 849 aa23.74■■□□□ 1.39
CHTOP-207ENST00000614256 PXDNLA1KZ92 1463 aa23.73■■□□□ 1.39
CHTOP-207ENST00000614256 INTS3Q68E01 1043 aaKnown RBP23.73■■□□□ 1.39
CHTOP-207ENST00000614256 ZNF330Q9Y3S2 320 aaPredicted RBP23.73■■□□□ 1.39
CHTOP-207ENST00000614256 C4BP0C0L5 1744 aa23.73■■□□□ 1.39
CHTOP-207ENST00000614256 ERICH6BQ5W0A0 696 aa23.73■■□□□ 1.39
CHTOP-207ENST00000614256 KSR2Q6VAB6 950 aa23.73■■□□□ 1.39
CHTOP-207ENST00000614256 MAP3K2Q9Y2U5 619 aa23.73■■□□□ 1.39
CHTOP-207ENST00000614256 DNAAF4Q8WXU2 420 aa23.72■■□□□ 1.39
CHTOP-207ENST00000614256 APBA3O96018 575 aa23.7■■□□□ 1.39
CHTOP-207ENST00000614256 RGPD3A6NKT7 1758 aaPredicted RBP23.7■■□□□ 1.38
CHTOP-207ENST00000614256 RGPD4Q7Z3J3 1758 aa23.7■■□□□ 1.38
CHTOP-207ENST00000614256 AFDNP55196 1824 aaKnown RBP23.7■■□□□ 1.38
CHTOP-207ENST00000614256 DDX58O95786 925 aaKnown RBP23.7■■□□□ 1.38
CHTOP-207ENST00000614256 ANKRD13DQ6ZTN6 518 aa23.7■■□□□ 1.38
CHTOP-207ENST00000614256 PROM2Q8N271 834 aa23.7■■□□□ 1.38
CHTOP-207ENST00000614256 CNTNAP4Q9C0A0 1308 aa23.69■■□□□ 1.38
CHTOP-207ENST00000614256 IL6STP40189 918 aaPredicted RBP23.69■■□□□ 1.38
CHTOP-207ENST00000614256 DDX19BQ9UMR2 479 aa23.69■■□□□ 1.38
CHTOP-207ENST00000614256 NUP98P52948 1817 aa23.69■■□□□ 1.38
CHTOP-207ENST00000614256 EIF5P55010 431 aaKnown RBP23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms