RNA–Protein interactions for RNA: ENST00000614132.4

PSMB3-209, Transcript of proteasome subunit beta 3, humanhuman

TSL 2

Gene PSMB3, Length 426 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB3-209ENST00000614132 LTV1Q96GA3 475 aaPredicted RBP6.92□□□□□ -1.3
PSMB3-209ENST00000614132 TAOK3Q9H2K8 898 aa6.92□□□□□ -1.3
PSMB3-209ENST00000614132 RNF186Q9NXI6 227 aa6.92□□□□□ -1.3
PSMB3-209ENST00000614132 RNF123Q5XPI4 1314 aa6.92□□□□□ -1.3
PSMB3-209ENST00000614132 TTC21AQ8NDW8 1320 aa6.92□□□□□ -1.3
PSMB3-209ENST00000614132 INSRP06213 1382 aa6.92□□□□□ -1.3
PSMB3-209ENST00000614132 POTEFA5A3E0 1075 aa6.91□□□□□ -1.3
PSMB3-209ENST00000614132 PLA2G5P39877 138 aa6.91□□□□□ -1.3
PSMB3-209ENST00000614132 RC3H1Q5TC82 1133 aaKnown RBP6.91□□□□□ -1.3
PSMB3-209ENST00000614132 C2CD5Q86YS7 1000 aa6.91□□□□□ -1.3
PSMB3-209ENST00000614132 ZNF692Q9BU19 519 aaPredicted RBP6.91□□□□□ -1.3
PSMB3-209ENST00000614132 SRP68Q9UHB9 627 aaKnown RBP6.91□□□□□ -1.3
PSMB3-209ENST00000614132 ZNF541Q9H0D2 1346 aa6.91□□□□□ -1.3
PSMB3-209ENST00000614132 H0YGN5 161 aa6.9□□□□□ -1.3
PSMB3-209ENST00000614132 CELF2O95319 508 aaKnown RBP6.9□□□□□ -1.3
PSMB3-209ENST00000614132 HOXD11P31277 338 aaPredicted RBP6.9□□□□□ -1.3
PSMB3-209ENST00000614132 CHRDL2Q6WN34 429 aa6.9□□□□□ -1.3
PSMB3-209ENST00000614132 IP6K1Q92551 441 aa6.9□□□□□ -1.3
PSMB3-209ENST00000614132 RBM27Q9P2N5 1060 aaKnown RBP6.9□□□□□ -1.3
PSMB3-209ENST00000614132 ASAP1Q9ULH1 1129 aa6.9□□□□□ -1.3
PSMB3-209ENST00000614132 CGNL1Q0VF96 1302 aa6.9□□□□□ -1.3
PSMB3-209ENST00000614132 MAP2P11137 1827 aaKnown RBP6.9□□□□□ -1.31
PSMB3-209ENST00000614132 CEP290O15078 2479 aa6.89□□□□□ -1.31
PSMB3-209ENST00000614132 H0YIN7 160 aa6.89□□□□□ -1.31
PSMB3-209ENST00000614132 FBXO46Q6PJ61 603 aaPredicted RBP6.89□□□□□ -1.31
PSMB3-209ENST00000614132 BICDL1Q6ZP65 573 aa6.89□□□□□ -1.31
PSMB3-209ENST00000614132 SYNE4Q8N205 404 aa6.89□□□□□ -1.31
PSMB3-209ENST00000614132 FAM122AQ96E09 287 aa6.89□□□□□ -1.31
PSMB3-209ENST00000614132 HDAC9Q9UKV0 1011 aa6.89□□□□□ -1.31
PSMB3-209ENST00000614132 USP31Q70CQ4 1352 aa6.89□□□□□ -1.31
PSMB3-209ENST00000614132 SMG6Q86US8 1419 aaKnown RBP6.89□□□□□ -1.31
PSMB3-209ENST00000614132 DICER1Q9UPY3 1922 aaKnown RBP6.89□□□□□ -1.31
PSMB3-209ENST00000614132 PCDH11XQ9BZA7 1347 aa6.88□□□□□ -1.31
PSMB3-209ENST00000614132 PCDH11YQ9BZA8 1340 aa6.88□□□□□ -1.31
PSMB3-209ENST00000614132 CNTNAP4Q9C0A0 1308 aa6.88□□□□□ -1.31
PSMB3-209ENST00000614132 USP42Q9H9J4 1324 aaKnown RBP6.88□□□□□ -1.31
PSMB3-209ENST00000614132 CYP27B1O15528 508 aa6.88□□□□□ -1.31
PSMB3-209ENST00000614132 KIF23Q02241 960 aaPredicted RBP6.88□□□□□ -1.31
PSMB3-209ENST00000614132 RAPGEFL1Q9UHV5 662 aa6.88□□□□□ -1.31
PSMB3-209ENST00000614132 CACNA1AO00555 2505 aa6.88□□□□□ -1.31
PSMB3-209ENST00000614132 CD163L1Q9NR16 1453 aa6.87□□□□□ -1.31
PSMB3-209ENST00000614132 MAP3K19Q56UN5 1328 aa6.87□□□□□ -1.31
PSMB3-209ENST00000614132 FAM155AB1AL88 458 aaPredicted RBP6.87□□□□□ -1.31
PSMB3-209ENST00000614132 INTS3Q68E01 1043 aaKnown RBP6.87□□□□□ -1.31
PSMB3-209ENST00000614132 RAPGEF4Q8WZA2 1011 aa6.87□□□□□ -1.31
PSMB3-209ENST00000614132 ZNF622Q969S3 477 aaKnown RBP eCLIP6.87□□□□□ -1.31
PSMB3-209ENST00000614132 SNX27Q96L92 541 aa6.87□□□□□ -1.31
PSMB3-209ENST00000614132 SLC4A9Q96Q91 983 aa6.87□□□□□ -1.31
PSMB3-209ENST00000614132 RANBP2P49792 3224 aaKnown RBP6.86□□□□□ -1.31
PSMB3-209ENST00000614132 ERBB4Q15303 1308 aa6.86□□□□□ -1.31
PSMB3-209ENST00000614132 TATP17735 454 aaPredicted RBP6.86□□□□□ -1.31
PSMB3-209ENST00000614132 EN2P19622 333 aaPredicted RBP6.86□□□□□ -1.31
PSMB3-209ENST00000614132 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.86□□□□□ -1.31
PSMB3-209ENST00000614132 GPC2Q8N158 579 aa6.86□□□□□ -1.31
PSMB3-209ENST00000614132 CCDC24Q8N4L8 307 aa6.86□□□□□ -1.31
PSMB3-209ENST00000614132 ZNF296Q8WUU4 475 aaPredicted RBP6.86□□□□□ -1.31
PSMB3-209ENST00000614132 ATG3Q9NT62 314 aa6.86□□□□□ -1.31
PSMB3-209ENST00000614132 KDM2AQ9Y2K7 1162 aa6.86□□□□□ -1.31
PSMB3-209ENST00000614132 UNC80Q8N2C7 3258 aa6.86□□□□□ -1.31
PSMB3-209ENST00000614132 FAM208AQ9UK61 1670 aaKnown RBP6.85□□□□□ -1.31
PSMB3-209ENST00000614132 FZD9O00144 591 aa6.85□□□□□ -1.31
PSMB3-209ENST00000614132 SERPINB2P05120 415 aa6.85□□□□□ -1.31
PSMB3-209ENST00000614132 EPS15P42566 896 aa6.85□□□□□ -1.31
PSMB3-209ENST00000614132 HUNKP57058 714 aa6.85□□□□□ -1.31
PSMB3-209ENST00000614132 NKX1-1Q15270 411 aaPredicted RBP6.85□□□□□ -1.31
PSMB3-209ENST00000614132 NBPF6Q5VWK0 638 aa6.85□□□□□ -1.31
PSMB3-209ENST00000614132 USP50Q70EL3 339 aaPredicted RBP6.85□□□□□ -1.31
PSMB3-209ENST00000614132 LRCH3Q96II8 777 aa6.85□□□□□ -1.31
PSMB3-209ENST00000614132 NBPF4Q96M43 638 aa6.85□□□□□ -1.31
PSMB3-209ENST00000614132 CSRNP1Q96S65 589 aa6.85□□□□□ -1.31
PSMB3-209ENST00000614132 TMOD3Q9NYL9 352 aa6.85□□□□□ -1.31
PSMB3-209ENST00000614132 STXBP5LQ9Y2K9 1186 aa6.85□□□□□ -1.31
PSMB3-209ENST00000614132 FER1L6Q2WGJ9 1857 aa6.85□□□□□ -1.31
PSMB3-209ENST00000614132 KDRP35968 1356 aa6.84□□□□□ -1.31
PSMB3-209ENST00000614132 TRPM7Q96QT4 1865 aa6.84□□□□□ -1.31
PSMB3-209ENST00000614132 SOX1O00570 391 aaPredicted RBP6.84□□□□□ -1.31
PSMB3-209ENST00000614132 LMOD1P29536 600 aaPredicted RBP6.84□□□□□ -1.31
PSMB3-209ENST00000614132 NFIXQ14938 502 aa6.84□□□□□ -1.31
PSMB3-209ENST00000614132 SOGA3Q5TF21 947 aa6.84□□□□□ -1.31
PSMB3-209ENST00000614132 RGMBQ6NW40 437 aa6.84□□□□□ -1.31
PSMB3-209ENST00000614132 ANKRD13DQ6ZTN6 518 aa6.84□□□□□ -1.31
PSMB3-209ENST00000614132 NME9Q86XW9 330 aa6.84□□□□□ -1.31
PSMB3-209ENST00000614132 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.84□□□□□ -1.31
PSMB3-209ENST00000614132 USHBP1Q8N6Y0 703 aa6.84□□□□□ -1.31
PSMB3-209ENST00000614132 CCDC102AQ96A19 550 aa6.84□□□□□ -1.31
PSMB3-209ENST00000614132 MPHOSPH9Q99550 1183 aa6.84□□□□□ -1.31
PSMB3-209ENST00000614132 PRO3102Q9H379 93 aa6.84□□□□□ -1.31
PSMB3-209ENST00000614132 ZNF408Q9H9D4 720 aa6.84□□□□□ -1.31
PSMB3-209ENST00000614132 SPTBN5Q9NRC6 3674 aaKnown RBP6.84□□□□□ -1.31
PSMB3-209ENST00000614132 VCANP13611 3396 aa6.84□□□□□ -1.31
PSMB3-209ENST00000614132 BRCA2P51587 3418 aa6.83□□□□□ -1.32
PSMB3-209ENST00000614132 CARMIL3Q8ND23 1372 aa6.83□□□□□ -1.32
PSMB3-209ENST00000614132 DLEC1Q9Y238 1755 aa6.83□□□□□ -1.32
PSMB3-209ENST00000614132 USPL1Q5W0Q7 1092 aa6.83□□□□□ -1.32
PSMB3-209ENST00000614132 RBM42Q9BTD8 480 aaKnown RBP6.83□□□□□ -1.32
PSMB3-209ENST00000614132 GLIS2Q9BZE0 524 aaPredicted RBP6.83□□□□□ -1.32
PSMB3-209ENST00000614132 ZNF277Q9NRM2 450 aaPredicted RBP6.83□□□□□ -1.32
PSMB3-209ENST00000614132 PDZRN3Q9UPQ7 1066 aa6.83□□□□□ -1.32
PSMB3-209ENST00000614132 KTN1Q86UP2 1357 aaKnown RBP6.82□□□□□ -1.32
PSMB3-209ENST00000614132 ZPR1O75312 459 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms