RNA–Protein interactions for RNA: ENST00000613795.4

CLCN3-211, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,874 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-211ENST00000613795 SMC1AQ14683 1233 aaKnown RBP7.98□□□□□ -1.13
CLCN3-211ENST00000613795 ALDH1L2Q3SY69 923 aa7.98□□□□□ -1.13
CLCN3-211ENST00000613795 TRIM22Q8IYM9 498 aa7.98□□□□□ -1.13
CLCN3-211ENST00000613795 RSRC1Q96IZ7 334 aaKnown RBP7.98□□□□□ -1.13
CLCN3-211ENST00000613795 TAX1BP1Q86VP1 789 aa7.98□□□□□ -1.13
CLCN3-211ENST00000613795 CDK5RAP3Q96JB5 506 aa7.98□□□□□ -1.13
CLCN3-211ENST00000613795 SH2B1Q9NRF2 756 aaPredicted RBP7.98□□□□□ -1.13
CLCN3-211ENST00000613795 PDRG1Q9NUG6 133 aa7.98□□□□□ -1.13
CLCN3-211ENST00000613795 NOB1Q9ULX3 412 aaKnown RBP7.98□□□□□ -1.13
CLCN3-211ENST00000613795 EXOSC9Q06265 439 aaKnown RBP7.98□□□□□ -1.13
CLCN3-211ENST00000613795 STX1AQ16623 288 aa7.98□□□□□ -1.13
CLCN3-211ENST00000613795 GRIN2AQ12879 1464 aa7.98□□□□□ -1.13
CLCN3-211ENST00000613795 CCDC57Q2TAC2 916 aa7.98□□□□□ -1.13
CLCN3-211ENST00000613795 AMOTQ4VCS5 1084 aa7.98□□□□□ -1.13
CLCN3-211ENST00000613795 CCDC184Q52MB2 194 aa7.98□□□□□ -1.13
CLCN3-211ENST00000613795 SPATA24Q86W54 205 aa7.98□□□□□ -1.13
CLCN3-211ENST00000613795 HDGFL1Q5TGJ6 251 aa7.97□□□□□ -1.13
CLCN3-211ENST00000613795 TAF4BQ92750 862 aa7.97□□□□□ -1.13
CLCN3-211ENST00000613795 TRMT1Q9NXH9 659 aaKnown RBP7.97□□□□□ -1.13
CLCN3-211ENST00000613795 ITSN2Q9NZM3 1697 aa7.97□□□□□ -1.13
CLCN3-211ENST00000613795 TMEM132EQ6IEE7 984 aa7.97□□□□□ -1.13
CLCN3-211ENST00000613795 NECTIN2Q92692 538 aa7.97□□□□□ -1.13
CLCN3-211ENST00000613795 CNNM1Q9NRU3 951 aa7.97□□□□□ -1.13
CLCN3-211ENST00000613795 NKTRP30414 1462 aaKnown RBP7.97□□□□□ -1.13
CLCN3-211ENST00000613795 IBSPP21815 317 aaPredicted RBP7.97□□□□□ -1.13
CLCN3-211ENST00000613795 AIMP1Q12904 312 aaKnown RBP7.97□□□□□ -1.13
CLCN3-211ENST00000613795 POTEDQ86YR6 584 aa7.97□□□□□ -1.13
CLCN3-211ENST00000613795 ERO1AQ96HE7 468 aa7.97□□□□□ -1.13
CLCN3-211ENST00000613795 NESP48681 1621 aa7.97□□□□□ -1.13
CLCN3-211ENST00000613795 ZNF622Q969S3 477 aaKnown RBP eCLIP7.97□□□□□ -1.13
CLCN3-211ENST00000613795 ZNF287Q9HBT7 754 aa7.97□□□□□ -1.13
CLCN3-211ENST00000613795 NFE2L2Q16236 605 aa7.96□□□□□ -1.13
CLCN3-211ENST00000613795 KRBA2Q6ZNG9 492 aa7.96□□□□□ -1.13
CLCN3-211ENST00000613795 GCOM1H8Y6P7 765 aaPredicted RBP7.96□□□□□ -1.13
CLCN3-211ENST00000613795 OPA1O60313 960 aa7.96□□□□□ -1.13
CLCN3-211ENST00000613795 MYZAPP0CAP1 466 aa7.96□□□□□ -1.13
CLCN3-211ENST00000613795 CEBPZQ03701 1054 aaKnown RBP7.96□□□□□ -1.13
CLCN3-211ENST00000613795 CCAR1Q8IX12 1150 aaKnown RBP7.96□□□□□ -1.13
CLCN3-211ENST00000613795 BANK1Q8NDB2 785 aa7.96□□□□□ -1.13
CLCN3-211ENST00000613795 WDR66Q8TBY9 1149 aa7.96□□□□□ -1.13
CLCN3-211ENST00000613795 VGLL3A8MV65 326 aa7.96□□□□□ -1.14
CLCN3-211ENST00000613795 RAB3GAP1Q15042 981 aa7.96□□□□□ -1.14
CLCN3-211ENST00000613795 CCDC50Q8IVM0 306 aa7.96□□□□□ -1.14
CLCN3-211ENST00000613795 NAA15Q9BXJ9 866 aaKnown RBP7.96□□□□□ -1.14
CLCN3-211ENST00000613795 AKAP2Q9Y2D5 859 aa7.96□□□□□ -1.14
CLCN3-211ENST00000613795 NAIPQ13075 1403 aa7.96□□□□□ -1.14
CLCN3-211ENST00000613795 CD109Q6YHK3 1445 aa7.96□□□□□ -1.14
CLCN3-211ENST00000613795 CAMK4Q16566 473 aa7.96□□□□□ -1.14
CLCN3-211ENST00000613795 DNAI2Q9GZS0 605 aa7.96□□□□□ -1.14
CLCN3-211ENST00000613795 FMNL3Q8IVF7 1028 aa7.96□□□□□ -1.14
CLCN3-211ENST00000613795 SMC5Q8IY18 1101 aa7.96□□□□□ -1.14
CLCN3-211ENST00000613795 OTUD6BQ8N6M0 293 aa7.96□□□□□ -1.14
CLCN3-211ENST00000613795 CEP112Q8N8E3 955 aa7.96□□□□□ -1.14
CLCN3-211ENST00000613795 CEP131Q9UPN4 1083 aa7.96□□□□□ -1.14
CLCN3-211ENST00000613795 ADGRL1O94910 1474 aa7.96□□□□□ -1.14
CLCN3-211ENST00000613795 TMCO5BA8MYB1 307 aa7.95□□□□□ -1.14
CLCN3-211ENST00000613795 PAFAH1B1P43034 410 aa7.95□□□□□ -1.14
CLCN3-211ENST00000613795 CKAP4Q07065 602 aaKnown RBP7.95□□□□□ -1.14
CLCN3-211ENST00000613795 CCDC69A6NI79 296 aa7.95□□□□□ -1.14
CLCN3-211ENST00000613795 A6NNZ2 444 aa7.95□□□□□ -1.14
CLCN3-211ENST00000613795 SLC4A2P04920 1241 aa7.95□□□□□ -1.14
CLCN3-211ENST00000613795 TUBB8Q3ZCM7 444 aa7.95□□□□□ -1.14
CLCN3-211ENST00000613795 ZNF530Q6P9A1 599 aaPredicted RBP7.95□□□□□ -1.14
CLCN3-211ENST00000613795 BLOC1S2Q6QNY1 142 aa7.95□□□□□ -1.14
CLCN3-211ENST00000613795 FAM200AQ8TCP9 573 aa7.95□□□□□ -1.14
CLCN3-211ENST00000613795 GOLGA1Q92805 767 aa7.95□□□□□ -1.14
CLCN3-211ENST00000613795 WDR70Q9NW82 654 aa7.95□□□□□ -1.14
CLCN3-211ENST00000613795 ZNF652Q9Y2D9 606 aa7.95□□□□□ -1.14
CLCN3-211ENST00000613795 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.95□□□□□ -1.14
CLCN3-211ENST00000613795 GNAT3A8MTJ3 354 aa7.95□□□□□ -1.14
CLCN3-211ENST00000613795 HSF2BPO75031 334 aa7.95□□□□□ -1.14
CLCN3-211ENST00000613795 BMP2KLQ5H9B9 411 aa7.95□□□□□ -1.14
CLCN3-211ENST00000613795 MSL1Q68DK7 614 aa7.95□□□□□ -1.14
CLCN3-211ENST00000613795 MX1P20591 662 aa7.95□□□□□ -1.14
CLCN3-211ENST00000613795 SF3B2Q13435 895 aaKnown RBP7.95□□□□□ -1.14
CLCN3-211ENST00000613795 C8orf34Q49A92 452 aa7.95□□□□□ -1.14
CLCN3-211ENST00000613795 EHBP1Q8NDI1 1231 aa7.95□□□□□ -1.14
CLCN3-211ENST00000613795 CABP1Q9NZU7 370 aa7.95□□□□□ -1.14
CLCN3-211ENST00000613795 RBM27Q9P2N5 1060 aaKnown RBP7.95□□□□□ -1.14
CLCN3-211ENST00000613795 MAP2K2P36507 400 aa7.95□□□□□ -1.14
CLCN3-211ENST00000613795 ZNF165P49910 485 aa7.95□□□□□ -1.14
CLCN3-211ENST00000613795 CTCFLQ8NI51 663 aaPredicted RBP7.95□□□□□ -1.14
CLCN3-211ENST00000613795 PIBF1Q8WXW3 757 aa7.95□□□□□ -1.14
CLCN3-211ENST00000613795 TTC21BQ7Z4L5 1316 aa7.94□□□□□ -1.14
CLCN3-211ENST00000613795 NSD3Q9BZ95 1437 aa7.94□□□□□ -1.14
CLCN3-211ENST00000613795 SYCP1Q15431 976 aa7.94□□□□□ -1.14
CLCN3-211ENST00000613795 SPA17Q15506 151 aa7.94□□□□□ -1.14
CLCN3-211ENST00000613795 SCAF11Q99590 1463 aaKnown RBP7.94□□□□□ -1.14
CLCN3-211ENST00000613795 PLB1Q6P1J6 1458 aa7.94□□□□□ -1.14
CLCN3-211ENST00000613795 STARD3NLO95772 234 aa7.94□□□□□ -1.14
CLCN3-211ENST00000613795 SKILP12757 684 aa7.94□□□□□ -1.14
CLCN3-211ENST00000613795 SOGA3Q5TF21 947 aa7.94□□□□□ -1.14
CLCN3-211ENST00000613795 SULT6B1Q6IMI4 303 aa7.94□□□□□ -1.14
CLCN3-211ENST00000613795 MKRN1Q9UHC7 482 aaKnown RBP7.94□□□□□ -1.14
CLCN3-211ENST00000613795 ZNF500O60304 480 aaPredicted RBP7.94□□□□□ -1.14
CLCN3-211ENST00000613795 CCDC121Q6ZUS5 278 aa7.94□□□□□ -1.14
CLCN3-211ENST00000613795 TMC6Q7Z403 805 aa7.94□□□□□ -1.14
CLCN3-211ENST00000613795 CCDC61Q9Y6R9 512 aa7.94□□□□□ -1.14
CLCN3-211ENST00000613795 NUP160Q12769 1436 aa7.94□□□□□ -1.14
CLCN3-211ENST00000613795 B4GALNT4Q76KP1 1039 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms