RNA–Protein interactions for RNA: ENST00000613642.4

CCL16-206, Transcript of C-C motif chemokine ligand 16, humanhuman

TSL 3

Gene CCL16, Length 687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL16-206ENST00000613642 FOXD4Q12950 439 aaPredicted RBP6.84□□□□□ -1.31
CCL16-206ENST00000613642 MYSM1Q5VVJ2 828 aa6.84□□□□□ -1.31
CCL16-206ENST00000613642 FRAT1Q92837 279 aaPredicted RBP6.84□□□□□ -1.31
CCL16-206ENST00000613642 C1QTNF2Q9BXJ5 285 aa6.84□□□□□ -1.31
CCL16-206ENST00000613642 JADE2Q9NQC1 790 aa6.84□□□□□ -1.31
CCL16-206ENST00000613642 ABCF2Q9UG63 623 aa6.84□□□□□ -1.31
CCL16-206ENST00000613642 SYNPO2Q9UMS6 1093 aa6.84□□□□□ -1.31
CCL16-206ENST00000613642 SUGT1Q9Y2Z0 365 aa6.84□□□□□ -1.31
CCL16-206ENST00000613642 IPO8O15397 1037 aaKnown RBP6.83□□□□□ -1.32
CCL16-206ENST00000613642 COQ9O75208 318 aa6.83□□□□□ -1.32
CCL16-206ENST00000613642 AGERQ15109 404 aa6.83□□□□□ -1.32
CCL16-206ENST00000613642 QPCTQ16769 361 aa6.83□□□□□ -1.32
CCL16-206ENST00000613642 HDGFL1Q5TGJ6 251 aa6.83□□□□□ -1.32
CCL16-206ENST00000613642 ZKSCAN2Q63HK3 967 aa6.83□□□□□ -1.32
CCL16-206ENST00000613642 ARMC2Q8NEN0 867 aa6.83□□□□□ -1.32
CCL16-206ENST00000613642 ZCRB1Q8TBF4 217 aaKnown RBP6.83□□□□□ -1.32
CCL16-206ENST00000613642 MORC4Q8TE76 937 aa6.83□□□□□ -1.32
CCL16-206ENST00000613642 CCDC85AQ96PX6 553 aaPredicted RBP6.83□□□□□ -1.32
CCL16-206ENST00000613642 SMC3Q9UQE7 1217 aa6.83□□□□□ -1.32
CCL16-206ENST00000613642 RPS6KL1Q9Y6S9 549 aa6.83□□□□□ -1.32
CCL16-206ENST00000613642 PEX19P40855 299 aa6.82□□□□□ -1.32
CCL16-206ENST00000613642 RGL3Q3MIN7 710 aa6.82□□□□□ -1.32
CCL16-206ENST00000613642 LSM14AQ8ND56 463 aaKnown RBP6.82□□□□□ -1.32
CCL16-206ENST00000613642 TRIM34Q9BYJ4 488 aa6.82□□□□□ -1.32
CCL16-206ENST00000613642 DONSONQ9NYP3 566 aa6.82□□□□□ -1.32
CCL16-206ENST00000613642 MAP4K5Q9Y4K4 846 aa6.82□□□□□ -1.32
CCL16-206ENST00000613642 SYNRGQ9UMZ2 1314 aa6.81□□□□□ -1.32
CCL16-206ENST00000613642 ZC3H4Q9UPT8 1303 aaKnown RBP6.81□□□□□ -1.32
CCL16-206ENST00000613642 CECR2Q9BXF3 1484 aa6.81□□□□□ -1.32
CCL16-206ENST00000613642 RAD54L2Q9Y4B4 1467 aa6.81□□□□□ -1.32
CCL16-206ENST00000613642 KLHL33A6NCF5 533 aa6.81□□□□□ -1.32
CCL16-206ENST00000613642 NUTM2BA6NNL0 878 aaPredicted RBP6.81□□□□□ -1.32
CCL16-206ENST00000613642 NUTM2EB1AL46 878 aaPredicted RBP6.81□□□□□ -1.32
CCL16-206ENST00000613642 EPB41L2O43491 1005 aaKnown RBP6.81□□□□□ -1.32
CCL16-206ENST00000613642 MAN1A2O60476 641 aa6.81□□□□□ -1.32
CCL16-206ENST00000613642 IPO7O95373 1038 aaKnown RBP6.81□□□□□ -1.32
CCL16-206ENST00000613642 CD151P48509 253 aa6.81□□□□□ -1.32
CCL16-206ENST00000613642 PDE4DQ08499 809 aa6.81□□□□□ -1.32
CCL16-206ENST00000613642 HSP90B2PQ58FF3 399 aa6.81□□□□□ -1.32
CCL16-206ENST00000613642 C6orf118Q5T5N4 469 aa6.81□□□□□ -1.32
CCL16-206ENST00000613642 NUTM2DQ5VT03 806 aaPredicted RBP6.81□□□□□ -1.32
CCL16-206ENST00000613642 SH3BP5LQ7L8J4 393 aa6.81□□□□□ -1.32
CCL16-206ENST00000613642 RPAINQ86UA6 219 aa6.81□□□□□ -1.32
CCL16-206ENST00000613642 NUTM2AQ8IVF1 878 aaPredicted RBP6.81□□□□□ -1.32
CCL16-206ENST00000613642 TRMT44Q8IYL2 757 aaKnown RBP6.81□□□□□ -1.32
CCL16-206ENST00000613642 MEIOBQ8N635 442 aa6.81□□□□□ -1.32
CCL16-206ENST00000613642 KIF3AQ9Y496 699 aa6.81□□□□□ -1.32
CCL16-206ENST00000613642 DYNC1I1O14576 645 aa6.8□□□□□ -1.32
CCL16-206ENST00000613642 PPFIA3O75145 1194 aa6.8□□□□□ -1.32
CCL16-206ENST00000613642 TDO2P48775 406 aa6.8□□□□□ -1.32
CCL16-206ENST00000613642 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.8□□□□□ -1.32
CCL16-206ENST00000613642 GET4Q7L5D6 327 aaPredicted RBP6.8□□□□□ -1.32
CCL16-206ENST00000613642 LINC00528Q8N1L1 170 aa6.8□□□□□ -1.32
CCL16-206ENST00000613642 MED4Q9NPJ6 270 aa6.8□□□□□ -1.32
CCL16-206ENST00000613642 FAM13BQ9NYF5 915 aa6.8□□□□□ -1.32
CCL16-206ENST00000613642 BICRAQ9NZM4 1560 aa6.8□□□□□ -1.32
CCL16-206ENST00000613642 SOS2Q07890 1332 aaPredicted RBP6.79□□□□□ -1.32
CCL16-206ENST00000613642 ANKRD62A6NC57 917 aa6.79□□□□□ -1.32
CCL16-206ENST00000613642 BMP2P12643 396 aa6.79□□□□□ -1.32
CCL16-206ENST00000613642 COPB2P35606 906 aa6.79□□□□□ -1.32
CCL16-206ENST00000613642 TRDNQ13061 729 aa6.79□□□□□ -1.32
CCL16-206ENST00000613642 ZFYVE27Q5T4F4 411 aa6.79□□□□□ -1.32
CCL16-206ENST00000613642 NBPF14Q5TI25 921 aa6.79□□□□□ -1.32
CCL16-206ENST00000613642 TSC1Q92574 1164 aa6.79□□□□□ -1.32
CCL16-206ENST00000613642 TIGD1Q96MW7 591 aa6.79□□□□□ -1.32
CCL16-206ENST00000613642 NINLQ9Y2I6 1382 aa6.79□□□□□ -1.32
CCL16-206ENST00000613642 TULP2O00295 520 aa6.78□□□□□ -1.32
CCL16-206ENST00000613642 PPP1R12AO14974 1030 aaPredicted RBP6.78□□□□□ -1.32
CCL16-206ENST00000613642 UPP2O95045 317 aa6.78□□□□□ -1.32
CCL16-206ENST00000613642 FSHRP23945 695 aa6.78□□□□□ -1.32
CCL16-206ENST00000613642 RHBDL3P58872 404 aa6.78□□□□□ -1.32
CCL16-206ENST00000613642 HSP90AB2PQ58FF8 381 aa6.78□□□□□ -1.32
CCL16-206ENST00000613642 ZC3H12AQ5D1E8 599 aaKnown RBP6.78□□□□□ -1.32
CCL16-206ENST00000613642 CT47A1Q5JQC4 288 aaPredicted RBP6.78□□□□□ -1.32
CCL16-206ENST00000613642 GJC2Q5T442 439 aaPredicted RBP6.78□□□□□ -1.32
CCL16-206ENST00000613642 DNAJC14Q6Y2X3 702 aaPredicted RBP6.78□□□□□ -1.32
CCL16-206ENST00000613642 DCAF11Q8TEB1 546 aa6.78□□□□□ -1.32
CCL16-206ENST00000613642 GPKOWQ92917 476 aaPredicted RBP eCLIP6.78□□□□□ -1.32
CCL16-206ENST00000613642 BORCS6Q96GS4 357 aa6.78□□□□□ -1.32
CCL16-206ENST00000613642 CALR3Q96L12 384 aaKnown RBP6.78□□□□□ -1.32
CCL16-206ENST00000613642 NUCKS1Q9H1E3 243 aaKnown RBP6.78□□□□□ -1.32
CCL16-206ENST00000613642 TMX4Q9H1E5 349 aaPredicted RBP6.78□□□□□ -1.32
CCL16-206ENST00000613642 RANBP17Q9H2T7 1088 aaKnown RBP6.78□□□□□ -1.32
CCL16-206ENST00000613642 KDM4CQ9H3R0 1056 aa6.78□□□□□ -1.32
CCL16-206ENST00000613642 PPP4R2Q9NY27 417 aa6.78□□□□□ -1.32
CCL16-206ENST00000613642 STK26Q9P289 416 aa6.78□□□□□ -1.32
CCL16-206ENST00000613642 CGNQ9P2M7 1197 aaKnown RBP6.78□□□□□ -1.32
CCL16-206ENST00000613642 DNMT3LQ9UJW3 386 aa6.78□□□□□ -1.32
CCL16-206ENST00000613642 AMOTL2Q9Y2J4 779 aa6.78□□□□□ -1.32
CCL16-206ENST00000613642 PAXBP1Q9Y5B6 917 aa6.78□□□□□ -1.32
CCL16-206ENST00000613642 EMILIN1Q9Y6C2 1016 aa6.78□□□□□ -1.32
CCL16-206ENST00000613642 CC2D2AQ9P2K1 1620 aa6.78□□□□□ -1.32
CCL16-206ENST00000613642 RAD50Q92878 1312 aa6.77□□□□□ -1.32
CCL16-206ENST00000613642 SH3BP5O60239 455 aa6.77□□□□□ -1.33
CCL16-206ENST00000613642 TPM3P06753 285 aa6.77□□□□□ -1.33
CCL16-206ENST00000613642 FAM200BP0CF97 657 aa6.77□□□□□ -1.33
CCL16-206ENST00000613642 SETSIPP0DME0 302 aa6.77□□□□□ -1.33
CCL16-206ENST00000613642 CLK2P49760 499 aaKnown RBP6.77□□□□□ -1.33
CCL16-206ENST00000613642 PSMC1P62191 440 aaKnown RBP6.77□□□□□ -1.33
CCL16-206ENST00000613642 VASH1Q7L8A9 365 aaPredicted RBP6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms