RNA–Protein interactions for RNA: ENST00000611379.1

TRIM46-211, Transcript of tripartite motif containing 46, humanhuman

TSL 1 (best) BASIC

Gene TRIM46, Length 3,082 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM46-211ENST00000611379 CACNA1FO60840 1977 aa19.47■□□□□ 0.71
TRIM46-211ENST00000611379 PANK2Q9BZ23 570 aa19.47■□□□□ 0.71
TRIM46-211ENST00000611379 GIGYF1O75420 1035 aaPredicted RBP19.46■□□□□ 0.71
TRIM46-211ENST00000611379 OS9Q13438 667 aaPredicted RBP19.46■□□□□ 0.71
TRIM46-211ENST00000611379 KIF1BPQ96EK5 621 aa19.46■□□□□ 0.71
TRIM46-211ENST00000611379 CWC22Q9HCG8 908 aaKnown RBP19.46■□□□□ 0.71
TRIM46-211ENST00000611379 PRAMEF22A3QJZ6 481 aa19.46■□□□□ 0.71
TRIM46-211ENST00000611379 PKP1Q13835 747 aa19.46■□□□□ 0.71
TRIM46-211ENST00000611379 PROSER3Q2NL68 480 aa19.46■□□□□ 0.71
TRIM46-211ENST00000611379 C9orf78Q9NZ63 289 aaPredicted RBP19.46■□□□□ 0.71
TRIM46-211ENST00000611379 MAP3K2Q9Y2U5 619 aa19.46■□□□□ 0.71
TRIM46-211ENST00000611379 MRE11P49959 708 aa19.45■□□□□ 0.7
TRIM46-211ENST00000611379 PALD1Q9ULE6 856 aa19.45■□□□□ 0.7
TRIM46-211ENST00000611379 PXDNQ92626 1479 aa19.45■□□□□ 0.7
TRIM46-211ENST00000611379 ADCY9O60503 1353 aa19.45■□□□□ 0.7
TRIM46-211ENST00000611379 MCTP1Q6DN14 999 aa19.44■□□□□ 0.7
TRIM46-211ENST00000611379 AOX1Q06278 1338 aa19.43■□□□□ 0.7
TRIM46-211ENST00000611379 NOL8Q76FK4 1167 aaKnown RBP19.43■□□□□ 0.7
TRIM46-211ENST00000611379 C19orf44Q9H6X5 657 aa19.43■□□□□ 0.7
TRIM46-211ENST00000611379 DDX49Q9Y6V7 483 aaKnown RBP19.43■□□□□ 0.7
TRIM46-211ENST00000611379 RGPD2P0DJD1 1756 aa19.43■□□□□ 0.7
TRIM46-211ENST00000611379 CLEC17AQ6ZS10 378 aa19.43■□□□□ 0.7
TRIM46-211ENST00000611379 GRPEL1Q9HAV7 217 aa19.43■□□□□ 0.7
TRIM46-211ENST00000611379 MED1Q15648 1581 aaPredicted RBP19.43■□□□□ 0.7
TRIM46-211ENST00000611379 HSP90AB4PQ58FF6 505 aa19.43■□□□□ 0.7
TRIM46-211ENST00000611379 NLRP2Q9NX02 1062 aa19.43■□□□□ 0.7
TRIM46-211ENST00000611379 AIMP1Q12904 312 aaKnown RBP19.42■□□□□ 0.7
TRIM46-211ENST00000611379 KSR2Q6VAB6 950 aa19.42■□□□□ 0.7
TRIM46-211ENST00000611379 TMX3Q96JJ7 454 aa19.42■□□□□ 0.7
TRIM46-211ENST00000611379 CWF19L2Q2TBE0 894 aaKnown RBP19.42■□□□□ 0.7
TRIM46-211ENST00000611379 ZNF142P52746 1687 aaPredicted RBP19.42■□□□□ 0.7
TRIM46-211ENST00000611379 PI4K2BQ8TCG2 481 aa19.41■□□□□ 0.7
TRIM46-211ENST00000611379 RAPGEF4Q8WZA2 1011 aa19.41■□□□□ 0.7
TRIM46-211ENST00000611379 DDX17Q92841 729 aaKnown RBP19.4■□□□□ 0.7
TRIM46-211ENST00000611379 IL25Q9H293 177 aa19.4■□□□□ 0.7
TRIM46-211ENST00000611379 NCAPD2Q15021 1401 aa19.4■□□□□ 0.7
TRIM46-211ENST00000611379 CYP2E1P05181 493 aaPredicted RBP19.4■□□□□ 0.7
TRIM46-211ENST00000611379 ANAPC15P60006 121 aa19.4■□□□□ 0.7
TRIM46-211ENST00000611379 FAM43AQ8N2R8 423 aa19.4■□□□□ 0.7
TRIM46-211ENST00000611379 UPF3BQ9BZI7 483 aaKnown RBP19.4■□□□□ 0.7
TRIM46-211ENST00000611379 ERBB3P21860 1342 aa19.4■□□□□ 0.7
TRIM46-211ENST00000611379 NCLP19338 710 aaKnown RBP19.4■□□□□ 0.7
TRIM46-211ENST00000611379 MCM2P49736 904 aa19.4■□□□□ 0.7
TRIM46-211ENST00000611379 SLC39A6Q13433 755 aa19.4■□□□□ 0.7
TRIM46-211ENST00000611379 GAS2L3Q86XJ1 694 aa19.4■□□□□ 0.7
TRIM46-211ENST00000611379 HYPKQ9NX55 129 aa19.4■□□□□ 0.7
TRIM46-211ENST00000611379 ALDH1L1O75891 902 aa19.39■□□□□ 0.69
TRIM46-211ENST00000611379 FOXD4L5Q5VV16 416 aaPredicted RBP19.39■□□□□ 0.69
TRIM46-211ENST00000611379 FOXD4L4Q8WXT5 416 aaPredicted RBP19.39■□□□□ 0.69
TRIM46-211ENST00000611379 CNTROBQ8N137 903 aa19.39■□□□□ 0.69
TRIM46-211ENST00000611379 ISY1Q9ULR0 285 aaKnown RBP19.39■□□□□ 0.69
TRIM46-211ENST00000611379 SLIT3O75094 1523 aa19.39■□□□□ 0.69
TRIM46-211ENST00000611379 ATF3P18847 181 aa19.38■□□□□ 0.69
TRIM46-211ENST00000611379 CLASRPQ8N2M8 674 aaKnown RBP19.38■□□□□ 0.69
TRIM46-211ENST00000611379 PA2G4Q9UQ80 394 aaKnown RBP19.38■□□□□ 0.69
TRIM46-211ENST00000611379 C1orf167Q5SNV9 1468 aa19.38■□□□□ 0.69
TRIM46-211ENST00000611379 CSB-PGBD3P0DP91 1061 aa19.38■□□□□ 0.69
TRIM46-211ENST00000611379 KLHL40Q2TBA0 621 aa19.38■□□□□ 0.69
TRIM46-211ENST00000611379 KDM3BQ7LBC6 1761 aa19.37■□□□□ 0.69
TRIM46-211ENST00000611379 AK9Q5TCS8 1911 aa19.37■□□□□ 0.69
TRIM46-211ENST00000611379 DDX58O95786 925 aaKnown RBP19.37■□□□□ 0.69
TRIM46-211ENST00000611379 HDAC5Q9UQL6 1122 aa19.37■□□□□ 0.69
TRIM46-211ENST00000611379 ZDHHC9Q9Y397 364 aa19.37■□□□□ 0.69
TRIM46-211ENST00000611379 LMO7Q8WWI1 1683 aa19.37■□□□□ 0.69
TRIM46-211ENST00000611379 DDX21Q9NR30 783 aaKnown RBP eCLIP19.36■□□□□ 0.69
TRIM46-211ENST00000611379 MTX1Q13505 466 aa19.36■□□□□ 0.69
TRIM46-211ENST00000611379 CWC27Q6UX04 472 aaKnown RBP19.36■□□□□ 0.69
TRIM46-211ENST00000611379 LINS1Q8NG48 757 aa19.36■□□□□ 0.69
TRIM46-211ENST00000611379 HEG1Q9ULI3 1381 aa19.36■□□□□ 0.69
TRIM46-211ENST00000611379 PHRF1Q9P1Y6 1649 aaKnown RBP19.36■□□□□ 0.69
TRIM46-211ENST00000611379 TATP17735 454 aaPredicted RBP19.36■□□□□ 0.69
TRIM46-211ENST00000611379 ZNF790Q6PG37 636 aa19.36■□□□□ 0.69
TRIM46-211ENST00000611379 NFATC2IPQ8NCF5 419 aa19.36■□□□□ 0.69
TRIM46-211ENST00000611379 CABLES1Q8TDN4 633 aa19.36■□□□□ 0.69
TRIM46-211ENST00000611379 ADAMTSL3P82987 1691 aa19.35■□□□□ 0.69
TRIM46-211ENST00000611379 PRPF40AO75400 957 aaKnown RBP19.35■□□□□ 0.69
TRIM46-211ENST00000611379 MYL6BP14649 208 aa19.35■□□□□ 0.69
TRIM46-211ENST00000611379 KIAA1211Q6ZU35 1233 aa19.35■□□□□ 0.69
TRIM46-211ENST00000611379 RIC3Q7Z5B4 369 aa19.35■□□□□ 0.69
TRIM46-211ENST00000611379 GRM8O00222 908 aa19.35■□□□□ 0.69
TRIM46-211ENST00000611379 SGSM2O43147 1006 aa19.35■□□□□ 0.69
TRIM46-211ENST00000611379 GLRX3O76003 335 aaKnown RBP19.35■□□□□ 0.69
TRIM46-211ENST00000611379 IFIT2P09913 472 aaKnown RBP19.35■□□□□ 0.69
TRIM46-211ENST00000611379 HSPA4P34932 840 aa19.35■□□□□ 0.69
TRIM46-211ENST00000611379 LMBRD1Q9NUN5 540 aa19.34■□□□□ 0.69
TRIM46-211ENST00000611379 OVOS2A0A0G2JMS6 1433 aa19.34■□□□□ 0.69
TRIM46-211ENST00000611379 CHAMP1Q96JM3 812 aa19.34■□□□□ 0.69
TRIM46-211ENST00000611379 N4BP2Q86UW6 1770 aaPredicted RBP19.34■□□□□ 0.69
TRIM46-211ENST00000611379 SPG7Q9UQ90 795 aa19.33■□□□□ 0.69
TRIM46-211ENST00000611379 NPHP3Q7Z494 1330 aa19.33■□□□□ 0.69
TRIM46-211ENST00000611379 SUCLG2Q96I99 432 aa19.33■□□□□ 0.69
TRIM46-211ENST00000611379 SLC52A2Q9HAB3 445 aa19.33■□□□□ 0.69
TRIM46-211ENST00000611379 TTC41PQ6P2S7 1318 aa19.33■□□□□ 0.68
TRIM46-211ENST00000611379 CHRNA2Q15822 529 aa19.33■□□□□ 0.68
TRIM46-211ENST00000611379 CAVIN1Q6NZI2 390 aaKnown RBP19.33■□□□□ 0.68
TRIM46-211ENST00000611379 ERC1Q8IUD2 1116 aa19.33■□□□□ 0.68
TRIM46-211ENST00000611379 PDIA6Q15084 440 aa19.32■□□□□ 0.68
TRIM46-211ENST00000611379 DIAPH3Q9NSV4 1193 aa19.32■□□□□ 0.68
TRIM46-211ENST00000611379 ECHDC1Q9NTX5 307 aa19.32■□□□□ 0.68
TRIM46-211ENST00000611379 PHKG2P15735 406 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms