RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 FAM177BA6PVY3 158 aa17.19■□□□□ 0.34
VPS36-207ENST00000611132 TTLL5Q6EMB2 1281 aa17.19■□□□□ 0.34
VPS36-207ENST00000611132 CCDC171Q6TFL3 1326 aa17.19■□□□□ 0.34
VPS36-207ENST00000611132 ERLIN1O75477 346 aa17.18■□□□□ 0.34
VPS36-207ENST00000611132 ANO6Q4KMQ2 910 aa17.18■□□□□ 0.34
VPS36-207ENST00000611132 PHACTR3Q96KR7 559 aa17.18■□□□□ 0.34
VPS36-207ENST00000611132 PCMTD1Q96MG8 357 aaPredicted RBP17.18■□□□□ 0.34
VPS36-207ENST00000611132 FEZ1Q99689 392 aa17.18■□□□□ 0.34
VPS36-207ENST00000611132 EIF3JO75822 258 aaKnown RBP17.18■□□□□ 0.34
VPS36-207ENST00000611132 POLKQ9UBT6 870 aa17.18■□□□□ 0.34
VPS36-207ENST00000611132 PLCH2O75038 1416 aa17.17■□□□□ 0.34
VPS36-207ENST00000611132 URI1O94763 535 aaPredicted RBP17.17■□□□□ 0.34
VPS36-207ENST00000611132 BMS1Q14692 1282 aaKnown RBP17.17■□□□□ 0.34
VPS36-207ENST00000611132 STX1AQ16623 288 aa17.17■□□□□ 0.34
VPS36-207ENST00000611132 PLEKHO1Q53GL0 409 aaPredicted RBP17.17■□□□□ 0.34
VPS36-207ENST00000611132 ECHDC1Q9NTX5 307 aa17.17■□□□□ 0.34
VPS36-207ENST00000611132 CFAP100Q494V2 611 aa17.17■□□□□ 0.34
VPS36-207ENST00000611132 FILIP1LQ4L180 1135 aa17.17■□□□□ 0.34
VPS36-207ENST00000611132 RUFY1Q96T51 708 aa17.17■□□□□ 0.34
VPS36-207ENST00000611132 TSPYL1Q9H0U9 437 aa17.17■□□□□ 0.34
VPS36-207ENST00000611132 PPP1R42Q7Z4L9 355 aa17.17■□□□□ 0.34
VPS36-207ENST00000611132 ABTB2Q8N961 1025 aa17.17■□□□□ 0.34
VPS36-207ENST00000611132 DACT1Q9NYF0 836 aa17.17■□□□□ 0.34
VPS36-207ENST00000611132 RAPGEF3O95398 923 aa17.16■□□□□ 0.34
VPS36-207ENST00000611132 PTGS1P23219 599 aa17.16■□□□□ 0.34
VPS36-207ENST00000611132 CHMLP26374 656 aa17.16■□□□□ 0.34
VPS36-207ENST00000611132 TAF7Q15545 349 aaPredicted RBP17.16■□□□□ 0.34
VPS36-207ENST00000611132 SMARCE1Q969G3 411 aa17.16■□□□□ 0.34
VPS36-207ENST00000611132 BOLA2Q9H3K6 86 aa17.16■□□□□ 0.34
VPS36-207ENST00000611132 TYRO3Q06418 890 aa17.16■□□□□ 0.34
VPS36-207ENST00000611132 MAPK8IP2Q13387 824 aaPredicted RBP17.16■□□□□ 0.34
VPS36-207ENST00000611132 NECAB1Q8N987 351 aa17.16■□□□□ 0.34
VPS36-207ENST00000611132 RHPN1Q8TCX5 695 aa17.16■□□□□ 0.34
VPS36-207ENST00000611132 PSME1Q06323 249 aa17.16■□□□□ 0.34
VPS36-207ENST00000611132 SNW1Q13573 536 aaKnown RBP17.16■□□□□ 0.34
VPS36-207ENST00000611132 IGSF3O75054 1194 aa17.15■□□□□ 0.34
VPS36-207ENST00000611132 KIF20AO95235 890 aa17.15■□□□□ 0.34
VPS36-207ENST00000611132 ATP8B2P98198 1209 aa17.15■□□□□ 0.34
VPS36-207ENST00000611132 EVI5LQ96CN4 794 aa17.15■□□□□ 0.34
VPS36-207ENST00000611132 IBTKQ9P2D0 1353 aaPredicted RBP17.15■□□□□ 0.34
VPS36-207ENST00000611132 ZSCAN12O43309 604 aa17.15■□□□□ 0.34
VPS36-207ENST00000611132 NOL10Q9BSC4 688 aaKnown RBP17.15■□□□□ 0.34
VPS36-207ENST00000611132 WDR7Q9Y4E6 1490 aa17.15■□□□□ 0.34
VPS36-207ENST00000611132 PTPRTO14522 1441 aa17.15■□□□□ 0.34
VPS36-207ENST00000611132 ERICH2A1L162 156 aa17.15■□□□□ 0.34
VPS36-207ENST00000611132 SKILP12757 684 aa17.15■□□□□ 0.34
VPS36-207ENST00000611132 TIGD1Q96MW7 591 aa17.15■□□□□ 0.34
VPS36-207ENST00000611132 SYT1P21579 422 aa17.14■□□□□ 0.34
VPS36-207ENST00000611132 PPFIBP1Q86W92 1011 aa17.14■□□□□ 0.34
VPS36-207ENST00000611132 POLR3GO15318 223 aaPredicted RBP17.14■□□□□ 0.33
VPS36-207ENST00000611132 AK2P54819 239 aa17.14■□□□□ 0.33
VPS36-207ENST00000611132 OGFRQ9NZT2 677 aa17.14■□□□□ 0.33
VPS36-207ENST00000611132 WASLO00401 505 aaPredicted RBP17.14■□□□□ 0.33
VPS36-207ENST00000611132 ATP2B1P20020 1258 aa17.14■□□□□ 0.33
VPS36-207ENST00000611132 ZNF530Q6P9A1 599 aaPredicted RBP17.14■□□□□ 0.33
VPS36-207ENST00000611132 C17orf53Q8N3J3 647 aaPredicted RBP17.14■□□□□ 0.33
VPS36-207ENST00000611132 DACH1Q9UI36 760 aa17.14■□□□□ 0.33
VPS36-207ENST00000611132 A0A1W2PP64 1363 aa17.14■□□□□ 0.33
VPS36-207ENST00000611132 PKP1Q13835 747 aa17.14■□□□□ 0.33
VPS36-207ENST00000611132 FSIP1Q8NA03 581 aa17.14■□□□□ 0.33
VPS36-207ENST00000611132 DNAAF4Q8WXU2 420 aa17.14■□□□□ 0.33
VPS36-207ENST00000611132 TRAPPC8Q9Y2L5 1435 aa17.14■□□□□ 0.33
VPS36-207ENST00000611132 CD2BP2O95400 341 aaKnown RBP17.13■□□□□ 0.33
VPS36-207ENST00000611132 BRD1O95696 1058 aa17.13■□□□□ 0.33
VPS36-207ENST00000611132 RAPGEF4Q8WZA2 1011 aa17.13■□□□□ 0.33
VPS36-207ENST00000611132 TRERF1Q96PN7 1200 aa17.13■□□□□ 0.33
VPS36-207ENST00000611132 ERBB4Q15303 1308 aa17.13■□□□□ 0.33
VPS36-207ENST00000611132 CAGE1Q8TC20 777 aa17.13■□□□□ 0.33
VPS36-207ENST00000611132 RIOK3O14730 519 aaKnown RBP17.13■□□□□ 0.33
VPS36-207ENST00000611132 GSPT1P15170 499 aaKnown RBP17.13■□□□□ 0.33
VPS36-207ENST00000611132 GTF2F1P35269 517 aaKnown RBP eCLIP17.13■□□□□ 0.33
VPS36-207ENST00000611132 BRPF1P55201 1214 aaPredicted RBP17.13■□□□□ 0.33
VPS36-207ENST00000611132 CCDC47Q96A33 483 aaKnown RBP17.13■□□□□ 0.33
VPS36-207ENST00000611132 DNAJC25Q9H1X3 360 aa17.12■□□□□ 0.33
VPS36-207ENST00000611132 GPT2Q8TD30 523 aa17.12■□□□□ 0.33
VPS36-207ENST00000611132 TMC6Q7Z403 805 aa17.12■□□□□ 0.33
VPS36-207ENST00000611132 CCDC8Q9H0W5 538 aaPredicted RBP17.12■□□□□ 0.33
VPS36-207ENST00000611132 NPHP3Q7Z494 1330 aa17.12■□□□□ 0.33
VPS36-207ENST00000611132 MAST1Q9Y2H9 1570 aa17.11■□□□□ 0.33
VPS36-207ENST00000611132 KRT24Q2M2I5 525 aa17.11■□□□□ 0.33
VPS36-207ENST00000611132 KDM5DQ9BY66 1539 aa17.11■□□□□ 0.33
VPS36-207ENST00000611132 GADD45BO75293 160 aaPredicted RBP17.11■□□□□ 0.33
VPS36-207ENST00000611132 CCAR1Q8IX12 1150 aaKnown RBP17.11■□□□□ 0.33
VPS36-207ENST00000611132 FANCAO15360 1455 aa17.11■□□□□ 0.33
VPS36-207ENST00000611132 ZNF397Q8NF99 534 aaPredicted RBP17.11■□□□□ 0.33
VPS36-207ENST00000611132 ZSCAN16Q9H4T2 348 aaPredicted RBP17.11■□□□□ 0.33
VPS36-207ENST00000611132 BTBD11A6QL63 1104 aa17.1■□□□□ 0.33
VPS36-207ENST00000611132 H0YHG0 523 aa17.1■□□□□ 0.33
VPS36-207ENST00000611132 ZFYVE9O95405 1425 aa17.1■□□□□ 0.33
VPS36-207ENST00000611132 SLU7O95391 586 aaKnown RBP17.1■□□□□ 0.33
VPS36-207ENST00000611132 TOP1P11387 765 aaKnown RBP17.1■□□□□ 0.33
VPS36-207ENST00000611132 GUCY1B3Q02153 619 aa17.1■□□□□ 0.33
VPS36-207ENST00000611132 AXDND1Q5T1B0 1012 aaPredicted RBP17.1■□□□□ 0.33
VPS36-207ENST00000611132 LUZP1Q86V48 1076 aa17.1■□□□□ 0.33
VPS36-207ENST00000611132 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.09■□□□□ 0.33
VPS36-207ENST00000611132 V9GYY5 206 aaPredicted RBP17.09■□□□□ 0.33
VPS36-207ENST00000611132 HMGB1P09429 215 aaKnown RBP17.09■□□□□ 0.33
VPS36-207ENST00000611132 XBP1P17861 261 aa17.09■□□□□ 0.33
VPS36-207ENST00000611132 CCDC150Q8NCX0 1101 aa17.09■□□□□ 0.33
VPS36-207ENST00000611132 TSC1Q92574 1164 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms