RNA–Protein interactions for RNA: ENST00000610553.1

EWSR1-221, Transcript of EWS RNA binding protein 1, humanhuman

TSL 2

Gene EWSR1, Length 2,300 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-221ENST00000610553 SYAP1Q96A49 352 aaPredicted RBP20.66■□□□□ 0.9
EWSR1-221ENST00000610553 BABAM1Q9NWV8 329 aa20.66■□□□□ 0.9
EWSR1-221ENST00000610553 CCDC39Q9UFE4 941 aa20.66■□□□□ 0.9
EWSR1-221ENST00000610553 MARF1Q9Y4F3 1742 aaKnown RBP20.66■□□□□ 0.9
EWSR1-221ENST00000610553 PLEKHG5O94827 1062 aa20.66■□□□□ 0.9
EWSR1-221ENST00000610553 TSPY26PQ9H489 355 aa20.66■□□□□ 0.9
EWSR1-221ENST00000610553 WDR33Q9C0J8 1336 aaKnown RBP20.65■□□□□ 0.9
EWSR1-221ENST00000610553 XPCQ01831 940 aaPredicted RBP20.65■□□□□ 0.9
EWSR1-221ENST00000610553 RNF214Q8ND24 703 aa20.65■□□□□ 0.9
EWSR1-221ENST00000610553 IL17REQ8NFR9 667 aa20.65■□□□□ 0.9
EWSR1-221ENST00000610553 IL1RAPL2Q9NP60 686 aa20.65■□□□□ 0.9
EWSR1-221ENST00000610553 RAD50Q92878 1312 aa20.65■□□□□ 0.9
EWSR1-221ENST00000610553 RPAP1Q9BWH6 1393 aaPredicted RBP20.65■□□□□ 0.9
EWSR1-221ENST00000610553 CRYBG1Q9Y4K1 1723 aa20.64■□□□□ 0.9
EWSR1-221ENST00000610553 PI4K2BQ8TCG2 481 aa20.64■□□□□ 0.89
EWSR1-221ENST00000610553 RAB11FIP3O75154 756 aa20.64■□□□□ 0.89
EWSR1-221ENST00000610553 POLA2Q14181 598 aa20.64■□□□□ 0.89
EWSR1-221ENST00000610553 TCHHQ07283 1943 aa20.63■□□□□ 0.89
EWSR1-221ENST00000610553 USP54Q70EL1 1684 aa20.63■□□□□ 0.89
EWSR1-221ENST00000610553 THEMISQ8N1K5 641 aaPredicted RBP20.63■□□□□ 0.89
EWSR1-221ENST00000610553 TMEM87AQ8NBN3 555 aa20.63■□□□□ 0.89
EWSR1-221ENST00000610553 NGDNQ8NEJ9 315 aaKnown RBP20.63■□□□□ 0.89
EWSR1-221ENST00000610553 PDCL3Q9H2J4 239 aa20.63■□□□□ 0.89
EWSR1-221ENST00000610553 R3HCC1Q9Y3T6 440 aaKnown RBP20.63■□□□□ 0.89
EWSR1-221ENST00000610553 GADD45BO75293 160 aaPredicted RBP20.62■□□□□ 0.89
EWSR1-221ENST00000610553 PHF14O94880 888 aa20.62■□□□□ 0.89
EWSR1-221ENST00000610553 TAF7Q15545 349 aaPredicted RBP20.62■□□□□ 0.89
EWSR1-221ENST00000610553 NUTM1Q86Y26 1132 aa20.62■□□□□ 0.89
EWSR1-221ENST00000610553 SGSM2O43147 1006 aa20.62■□□□□ 0.89
EWSR1-221ENST00000610553 HOXC9P31274 260 aa20.62■□□□□ 0.89
EWSR1-221ENST00000610553 GDPD2Q9HCC8 539 aa20.62■□□□□ 0.89
EWSR1-221ENST00000610553 PPP1R42Q7Z4L9 355 aa20.61■□□□□ 0.89
EWSR1-221ENST00000610553 USP48Q86UV5 1035 aa20.61■□□□□ 0.89
EWSR1-221ENST00000610553 CSPP1Q1MSJ5 1256 aa20.61■□□□□ 0.89
EWSR1-221ENST00000610553 HDGFL1Q5TGJ6 251 aa20.61■□□□□ 0.89
EWSR1-221ENST00000610553 TTC14Q96N46 770 aa20.61■□□□□ 0.89
EWSR1-221ENST00000610553 RHPN1Q8TCX5 695 aa20.6■□□□□ 0.89
EWSR1-221ENST00000610553 PHAXQ9H814 394 aaKnown RBP20.6■□□□□ 0.89
EWSR1-221ENST00000610553 AMOTL2Q9Y2J4 779 aa20.6■□□□□ 0.89
EWSR1-221ENST00000610553 SURF6O75683 361 aaKnown RBP20.6■□□□□ 0.89
EWSR1-221ENST00000610553 FOXD4L6Q3SYB3 417 aaPredicted RBP20.59■□□□□ 0.89
EWSR1-221ENST00000610553 FOXD4L3Q6VB84 417 aaPredicted RBP20.59■□□□□ 0.89
EWSR1-221ENST00000610553 LSG1Q9H089 658 aaKnown RBP20.59■□□□□ 0.89
EWSR1-221ENST00000610553 SNX14Q9Y5W7 946 aa20.59■□□□□ 0.89
EWSR1-221ENST00000610553 MED1Q15648 1581 aaPredicted RBP20.59■□□□□ 0.89
EWSR1-221ENST00000610553 NLRP6P59044 892 aa20.59■□□□□ 0.89
EWSR1-221ENST00000610553 KIF1BPQ96EK5 621 aa20.59■□□□□ 0.89
EWSR1-221ENST00000610553 ADAMTSL3P82987 1691 aa20.58■□□□□ 0.88
EWSR1-221ENST00000610553 MAP4K4O95819 1239 aaPredicted RBP20.58■□□□□ 0.88
EWSR1-221ENST00000610553 FAM184AQ8NB25 1140 aa20.58■□□□□ 0.88
EWSR1-221ENST00000610553 CEMIPQ8WUJ3 1361 aa20.57■□□□□ 0.88
EWSR1-221ENST00000610553 SRGAP3O43295 1099 aa20.56■□□□□ 0.88
EWSR1-221ENST00000610553 CNTROBQ8N137 903 aa20.56■□□□□ 0.88
EWSR1-221ENST00000610553 AK2P54819 239 aa20.56■□□□□ 0.88
EWSR1-221ENST00000610553 RASEFQ8IZ41 740 aa20.56■□□□□ 0.88
EWSR1-221ENST00000610553 USP42Q9H9J4 1324 aaKnown RBP20.56■□□□□ 0.88
EWSR1-221ENST00000610553 ANKARQ7Z5J8 1434 aa20.56■□□□□ 0.88
EWSR1-221ENST00000610553 ZSCAN22P10073 491 aaPredicted RBP20.55■□□□□ 0.88
EWSR1-221ENST00000610553 UQCRHLA0A096LP55 91 aa20.55■□□□□ 0.88
EWSR1-221ENST00000610553 UQCRHP07919 91 aa20.55■□□□□ 0.88
EWSR1-221ENST00000610553 NBPF7P0C2Y1 421 aaPredicted RBP20.55■□□□□ 0.88
EWSR1-221ENST00000610553 UVSSAQ2YD98 709 aa20.55■□□□□ 0.88
EWSR1-221ENST00000610553 CCDC183Q5T5S1 534 aa20.55■□□□□ 0.88
EWSR1-221ENST00000610553 RUFY3Q7L099 469 aa20.55■□□□□ 0.88
EWSR1-221ENST00000610553 KDM3BQ7LBC6 1761 aa20.55■□□□□ 0.88
EWSR1-221ENST00000610553 VSIG10Q8N0Z9 540 aa20.54■□□□□ 0.88
EWSR1-221ENST00000610553 CNPY2Q9Y2B0 182 aa20.54■□□□□ 0.88
EWSR1-221ENST00000610553 TBX22Q9Y458 520 aa20.54■□□□□ 0.88
EWSR1-221ENST00000610553 LIMCH1Q9UPQ0 1083 aa20.54■□□□□ 0.88
EWSR1-221ENST00000610553 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.54■□□□□ 0.88
EWSR1-221ENST00000610553 STX6O43752 255 aa20.53■□□□□ 0.88
EWSR1-221ENST00000610553 SYT1P21579 422 aa20.53■□□□□ 0.88
EWSR1-221ENST00000610553 BEND3Q5T5X7 828 aa20.53■□□□□ 0.88
EWSR1-221ENST00000610553 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.53■□□□□ 0.88
EWSR1-221ENST00000610553 PTMAP06454 111 aaKnown RBP20.53■□□□□ 0.88
EWSR1-221ENST00000610553 HOXB7P09629 217 aa20.52■□□□□ 0.88
EWSR1-221ENST00000610553 UBE2HP62256 183 aa20.52■□□□□ 0.88
EWSR1-221ENST00000610553 TTC41PQ6P2S7 1318 aa20.52■□□□□ 0.87
EWSR1-221ENST00000610553 KIAA2012Q0VF49 1180 aa20.52■□□□□ 0.87
EWSR1-221ENST00000610553 NUTM2GQ5VZR2 741 aa20.52■□□□□ 0.87
EWSR1-221ENST00000610553 DNAAF4Q8WXU2 420 aa20.52■□□□□ 0.87
EWSR1-221ENST00000610553 F13A1P00488 732 aa20.51■□□□□ 0.87
EWSR1-221ENST00000610553 EIF4A1P60842 406 aaKnown RBP20.51■□□□□ 0.87
EWSR1-221ENST00000610553 RBM10P98175 930 aaKnown RBP20.51■□□□□ 0.87
EWSR1-221ENST00000610553 HSP90AB4PQ58FF6 505 aa20.51■□□□□ 0.87
EWSR1-221ENST00000610553 SASS6Q6UVJ0 657 aa20.51■□□□□ 0.87
EWSR1-221ENST00000610553 CWC27Q6UX04 472 aaKnown RBP20.51■□□□□ 0.87
EWSR1-221ENST00000610553 LTN1O94822 1766 aa20.51■□□□□ 0.87
EWSR1-221ENST00000610553 LTV1Q96GA3 475 aaPredicted RBP20.5■□□□□ 0.87
EWSR1-221ENST00000610553 CHPF2Q9P2E5 772 aa20.5■□□□□ 0.87
EWSR1-221ENST00000610553 ZNF142P52746 1687 aaPredicted RBP20.5■□□□□ 0.87
EWSR1-221ENST00000610553 GLRX3O76003 335 aaKnown RBP20.5■□□□□ 0.87
EWSR1-221ENST00000610553 LETM1O95202 739 aaPredicted RBP20.5■□□□□ 0.87
EWSR1-221ENST00000610553 MAP7D2Q96T17 732 aa20.5■□□□□ 0.87
EWSR1-221ENST00000610553 SPG7Q9UQ90 795 aa20.5■□□□□ 0.87
EWSR1-221ENST00000610553 PI4KAP2A4QPH2 592 aa20.49■□□□□ 0.87
EWSR1-221ENST00000610553 DYNC1I1O14576 645 aa20.49■□□□□ 0.87
EWSR1-221ENST00000610553 KCNA6P17658 529 aa20.49■□□□□ 0.87
EWSR1-221ENST00000610553 EIF2S2P20042 333 aaKnown RBP20.49■□□□□ 0.87
EWSR1-221ENST00000610553 USHBP1Q8N6Y0 703 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms