RNA–Protein interactions for RNA: ENST00000609740.1

CCDC138-208, Transcript of coiled-coil domain containing 138, humanhuman

Gene CCDC138, Length 3,285 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC138-208ENST00000609740 LONRF1Q17RB8 773 aa9.66□□□□□ -0.86
CCDC138-208ENST00000609740 GJC2Q5T442 439 aaPredicted RBP9.66□□□□□ -0.86
CCDC138-208ENST00000609740 MAPKBP1O60336 1514 aa9.66□□□□□ -0.86
CCDC138-208ENST00000609740 hCG_2014768A0A024R1R8 64 aa9.66□□□□□ -0.86
CCDC138-208ENST00000609740 DYTNA2CJ06 578 aa9.66□□□□□ -0.86
CCDC138-208ENST00000609740 GIGYF1O75420 1035 aaPredicted RBP9.66□□□□□ -0.86
CCDC138-208ENST00000609740 TPPPO94811 219 aa9.66□□□□□ -0.86
CCDC138-208ENST00000609740 RRM1P23921 792 aa9.66□□□□□ -0.86
CCDC138-208ENST00000609740 TTC19Q6DKK2 380 aaPredicted RBP9.66□□□□□ -0.86
CCDC138-208ENST00000609740 MYLK4Q86YV6 388 aaPredicted RBP9.66□□□□□ -0.86
CCDC138-208ENST00000609740 MYO1HQ8N1T3 1032 aa9.66□□□□□ -0.86
CCDC138-208ENST00000609740 LARGE2Q8N3Y3 721 aa9.66□□□□□ -0.86
CCDC138-208ENST00000609740 JPH4Q96JJ6 628 aa9.66□□□□□ -0.86
CCDC138-208ENST00000609740 MKS1Q9NXB0 559 aa9.66□□□□□ -0.86
CCDC138-208ENST00000609740 ZCCHC11Q5TAX3 1644 aaKnown RBP9.66□□□□□ -0.86
CCDC138-208ENST00000609740 CDK13Q14004 1512 aaKnown RBP9.66□□□□□ -0.86
CCDC138-208ENST00000609740 RAPGEF6Q8TEU7 1601 aa9.66□□□□□ -0.86
CCDC138-208ENST00000609740 TCF3P15923 654 aa9.65□□□□□ -0.86
CCDC138-208ENST00000609740 FXNQ16595 210 aa9.65□□□□□ -0.86
CCDC138-208ENST00000609740 SOGA3Q5TF21 947 aa9.65□□□□□ -0.86
CCDC138-208ENST00000609740 WWC2Q6AWC2 1192 aa9.65□□□□□ -0.86
CCDC138-208ENST00000609740 NGDNQ8NEJ9 315 aaKnown RBP9.65□□□□□ -0.86
CCDC138-208ENST00000609740 CCDC34Q96HJ3 373 aa9.65□□□□□ -0.86
CCDC138-208ENST00000609740 CPSF2Q9P2I0 782 aaKnown RBP9.65□□□□□ -0.86
CCDC138-208ENST00000609740 BLOC1S6Q9UL45 172 aa9.65□□□□□ -0.86
CCDC138-208ENST00000609740 CHAF1AQ13111 956 aaPredicted RBP9.65□□□□□ -0.86
CCDC138-208ENST00000609740 SCYL1Q96KG9 808 aa9.65□□□□□ -0.86
CCDC138-208ENST00000609740 TRERF1Q96PN7 1200 aa9.65□□□□□ -0.86
CCDC138-208ENST00000609740 MPHOSPH9Q99550 1183 aa9.65□□□□□ -0.86
CCDC138-208ENST00000609740 FRAT2O75474 233 aaPredicted RBP9.65□□□□□ -0.87
CCDC138-208ENST00000609740 GSCP56915 257 aaPredicted RBP9.65□□□□□ -0.87
CCDC138-208ENST00000609740 AP1ARQ63HQ0 302 aa9.65□□□□□ -0.87
CCDC138-208ENST00000609740 UPF2Q9HAU5 1272 aaKnown RBP9.65□□□□□ -0.87
CCDC138-208ENST00000609740 VEZTQ9HBM0 779 aa9.65□□□□□ -0.87
CCDC138-208ENST00000609740 TMEM63CQ9P1W3 806 aa9.65□□□□□ -0.87
CCDC138-208ENST00000609740 HOXA2O43364 376 aa9.64□□□□□ -0.87
CCDC138-208ENST00000609740 HSPA5P11021 654 aaKnown RBP9.64□□□□□ -0.87
CCDC138-208ENST00000609740 ZBED9Q6R2W3 1325 aa9.64□□□□□ -0.87
CCDC138-208ENST00000609740 PTPRKQ15262 1439 aa9.64□□□□□ -0.87
CCDC138-208ENST00000609740 ABCC2Q92887 1545 aa9.64□□□□□ -0.87
CCDC138-208ENST00000609740 TRAF1Q13077 416 aa9.64□□□□□ -0.87
CCDC138-208ENST00000609740 MCM6Q14566 821 aa9.64□□□□□ -0.87
CCDC138-208ENST00000609740 KCNV1Q6PIU1 500 aa9.64□□□□□ -0.87
CCDC138-208ENST00000609740 CCDC73Q6ZRK6 1079 aa9.64□□□□□ -0.87
CCDC138-208ENST00000609740 YIPF2Q9BWQ6 316 aa9.64□□□□□ -0.87
CCDC138-208ENST00000609740 TBC1D2BQ9UPU7 963 aa9.64□□□□□ -0.87
CCDC138-208ENST00000609740 SENP3-EIF4A1A0A087X0R7 540 aa9.64□□□□□ -0.87
CCDC138-208ENST00000609740 HIP1RO75146 1068 aa9.64□□□□□ -0.87
CCDC138-208ENST00000609740 FCHSD2O94868 740 aa9.64□□□□□ -0.87
CCDC138-208ENST00000609740 HSP90AB1P08238 724 aaKnown RBP9.64□□□□□ -0.87
CCDC138-208ENST00000609740 STIP1P31948 543 aaKnown RBP9.64□□□□□ -0.87
CCDC138-208ENST00000609740 IRX1P78414 480 aaPredicted RBP9.64□□□□□ -0.87
CCDC138-208ENST00000609740 HNRNPUQ00839 825 aaKnown RBP eCLIP9.64□□□□□ -0.87
CCDC138-208ENST00000609740 PTK7Q13308 1070 aa9.64□□□□□ -0.87
CCDC138-208ENST00000609740 UBE2Q1Q7Z7E8 422 aa9.64□□□□□ -0.87
CCDC138-208ENST00000609740 CATIPQ7Z7H3 387 aa9.64□□□□□ -0.87
CCDC138-208ENST00000609740 RAD50Q92878 1312 aa9.64□□□□□ -0.87
CCDC138-208ENST00000609740 NINLQ9Y2I6 1382 aa9.64□□□□□ -0.87
CCDC138-208ENST00000609740 MYBL2P10244 700 aa9.63□□□□□ -0.87
CCDC138-208ENST00000609740 IGBP1P78318 339 aa9.63□□□□□ -0.87
CCDC138-208ENST00000609740 MYSM1Q5VVJ2 828 aa9.63□□□□□ -0.87
CCDC138-208ENST00000609740 TRIM11Q96F44 468 aa9.63□□□□□ -0.87
CCDC138-208ENST00000609740 MMTAG2Q9BU76 263 aaKnown RBP9.63□□□□□ -0.87
CCDC138-208ENST00000609740 DEF6Q9H4E7 631 aa9.63□□□□□ -0.87
CCDC138-208ENST00000609740 IFT122Q9HBG6 1241 aa9.63□□□□□ -0.87
CCDC138-208ENST00000609740 N6AMT1Q9Y5N5 214 aa9.63□□□□□ -0.87
CCDC138-208ENST00000609740 FOSL1P15407 271 aa9.63□□□□□ -0.87
CCDC138-208ENST00000609740 EIF4G2P78344 907 aaKnown RBP eCLIP9.63□□□□□ -0.87
CCDC138-208ENST00000609740 SRPK2P78362 688 aaKnown RBP9.63□□□□□ -0.87
CCDC138-208ENST00000609740 TATDN2Q93075 761 aa9.63□□□□□ -0.87
CCDC138-208ENST00000609740 THOC1Q96FV9 657 aaKnown RBP9.63□□□□□ -0.87
CCDC138-208ENST00000609740 CWC15Q9P013 229 aaKnown RBP9.63□□□□□ -0.87
CCDC138-208ENST00000609740 BOLA2-SMG1P6H3BVE0 249 aa9.62□□□□□ -0.87
CCDC138-208ENST00000609740 ADCY2Q08462 1091 aa9.62□□□□□ -0.87
CCDC138-208ENST00000609740 SKIV2LQ15477 1246 aaKnown RBP9.62□□□□□ -0.87
CCDC138-208ENST00000609740 PANK2Q9BZ23 570 aa9.62□□□□□ -0.87
CCDC138-208ENST00000609740 JRKLQ9Y4A0 524 aa9.62□□□□□ -0.87
CCDC138-208ENST00000609740 IVNS1ABPQ9Y6Y0 642 aa9.62□□□□□ -0.87
CCDC138-208ENST00000609740 CFAP43Q8NDM7 1665 aa9.62□□□□□ -0.87
CCDC138-208ENST00000609740 POGKQ9P215 609 aa9.62□□□□□ -0.87
CCDC138-208ENST00000609740 IP6K2Q9UHH9 426 aa9.62□□□□□ -0.87
CCDC138-208ENST00000609740 VCAM1P19320 739 aa9.62□□□□□ -0.87
CCDC138-208ENST00000609740 ZNF132P52740 706 aa9.62□□□□□ -0.87
CCDC138-208ENST00000609740 L3MBTL2Q969R5 705 aa9.62□□□□□ -0.87
CCDC138-208ENST00000609740 PRPF4BQ13523 1007 aaKnown RBP9.61□□□□□ -0.87
CCDC138-208ENST00000609740 SAPCD2Q86UD0 394 aa9.61□□□□□ -0.87
CCDC138-208ENST00000609740 RPUSD2Q8IZ73 545 aaKnown RBP9.61□□□□□ -0.87
CCDC138-208ENST00000609740 CHCHD4Q8N4Q1 142 aa9.61□□□□□ -0.87
CCDC138-208ENST00000609740 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.61□□□□□ -0.87
CCDC138-208ENST00000609740 SFMBT1Q9UHJ3 866 aa9.61□□□□□ -0.87
CCDC138-208ENST00000609740 A6NJR5 290 aa9.61□□□□□ -0.87
CCDC138-208ENST00000609740 SART3Q15020 963 aaKnown RBP9.61□□□□□ -0.87
CCDC138-208ENST00000609740 CCDC178Q5BJE1 867 aa9.61□□□□□ -0.87
CCDC138-208ENST00000609740 MCTP2Q6DN12 878 aa9.61□□□□□ -0.87
CCDC138-208ENST00000609740 WAPLQ7Z5K2 1190 aa9.61□□□□□ -0.87
CCDC138-208ENST00000609740 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.61□□□□□ -0.87
CCDC138-208ENST00000609740 PMFBP1Q8TBY8 1022 aa9.61□□□□□ -0.87
CCDC138-208ENST00000609740 SERPINA10Q9UK55 444 aa9.61□□□□□ -0.87
CCDC138-208ENST00000609740 CARMIL2Q6F5E8 1435 aa9.61□□□□□ -0.87
CCDC138-208ENST00000609740 UACAQ9BZF9 1416 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms