RNA–Protein interactions for RNA: ENST00000609021.1

HDDC2-208, Transcript of HD domain containing 2, humanhuman

Gene HDDC2, Length 3,529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-208ENST00000609021 SYT10Q6XYQ8 523 aa5.59□□□□□ -1.51
HDDC2-208ENST00000609021 DZIP1Q86YF9 867 aaKnown RBP5.59□□□□□ -1.51
HDDC2-208ENST00000609021 ZNF710Q8N1W2 664 aa5.59□□□□□ -1.51
HDDC2-208ENST00000609021 EXOC6Q8TAG9 804 aa5.59□□□□□ -1.51
HDDC2-208ENST00000609021 TRIM6Q9C030 488 aaPredicted RBP5.59□□□□□ -1.51
HDDC2-208ENST00000609021 UBA5Q9GZZ9 404 aa5.59□□□□□ -1.51
HDDC2-208ENST00000609021 CHMP5Q9NZZ3 219 aa5.59□□□□□ -1.51
HDDC2-208ENST00000609021 ABCF2Q9UG63 623 aa5.59□□□□□ -1.51
HDDC2-208ENST00000609021 PUF60Q9UHX1 559 aaKnown RBP5.59□□□□□ -1.51
HDDC2-208ENST00000609021 UACAQ9BZF9 1416 aa5.59□□□□□ -1.52
HDDC2-208ENST00000609021 ABCA6Q8N139 1617 aa5.59□□□□□ -1.52
HDDC2-208ENST00000609021 FAM177BA6PVY3 158 aa5.58□□□□□ -1.52
HDDC2-208ENST00000609021 WDHD1O75717 1129 aaPredicted RBP5.58□□□□□ -1.52
HDDC2-208ENST00000609021 PRPF4BQ13523 1007 aaKnown RBP5.58□□□□□ -1.52
HDDC2-208ENST00000609021 PHC3Q8NDX5 983 aa5.58□□□□□ -1.52
HDDC2-208ENST00000609021 ARMC2Q8NEN0 867 aa5.58□□□□□ -1.52
HDDC2-208ENST00000609021 TACO1Q9BSH4 297 aaKnown RBP5.58□□□□□ -1.52
HDDC2-208ENST00000609021 UTP6Q9NYH9 597 aaKnown RBP5.58□□□□□ -1.52
HDDC2-208ENST00000609021 MAGEC2Q9UBF1 373 aaPredicted RBP5.58□□□□□ -1.52
HDDC2-208ENST00000609021 PHF8Q9UPP1 1060 aa5.58□□□□□ -1.52
HDDC2-208ENST00000609021 TRIM66O15016 1216 aa5.58□□□□□ -1.52
HDDC2-208ENST00000609021 TPM4P67936 248 aa5.58□□□□□ -1.52
HDDC2-208ENST00000609021 KCNA1Q09470 495 aa5.58□□□□□ -1.52
HDDC2-208ENST00000609021 ARMC9Q7Z3E5 817 aa5.58□□□□□ -1.52
HDDC2-208ENST00000609021 CADPS2Q86UW7 1296 aa5.58□□□□□ -1.52
HDDC2-208ENST00000609021 NUTM1Q86Y26 1132 aa5.58□□□□□ -1.52
HDDC2-208ENST00000609021 THOC1Q96FV9 657 aaKnown RBP5.58□□□□□ -1.52
HDDC2-208ENST00000609021 CCDC85AQ96PX6 553 aaPredicted RBP5.58□□□□□ -1.52
HDDC2-208ENST00000609021 LZTS2Q9BRK4 669 aa5.58□□□□□ -1.52
HDDC2-208ENST00000609021 RWDD1Q9H446 243 aaPredicted RBP5.58□□□□□ -1.52
HDDC2-208ENST00000609021 USP25Q9UHP3 1055 aa5.58□□□□□ -1.52
HDDC2-208ENST00000609021 E9PCH4 1651 aa5.58□□□□□ -1.52
HDDC2-208ENST00000609021 CREB3O43889 395 aa5.58□□□□□ -1.52
HDDC2-208ENST00000609021 ECM2O94769 699 aaPredicted RBP5.58□□□□□ -1.52
HDDC2-208ENST00000609021 CA8P35219 290 aa5.58□□□□□ -1.52
HDDC2-208ENST00000609021 NF2P35240 595 aa5.58□□□□□ -1.52
HDDC2-208ENST00000609021 AMOTQ4VCS5 1084 aa5.58□□□□□ -1.52
HDDC2-208ENST00000609021 MMS22LQ6ZRQ5 1243 aa5.58□□□□□ -1.52
HDDC2-208ENST00000609021 ANKRD18AQ8IVF6 992 aa5.58□□□□□ -1.52
HDDC2-208ENST00000609021 PNISRQ8TF01 805 aaKnown RBP5.58□□□□□ -1.52
HDDC2-208ENST00000609021 BICD1Q96G01 975 aa5.58□□□□□ -1.52
HDDC2-208ENST00000609021 AK7Q96M32 723 aa5.58□□□□□ -1.52
HDDC2-208ENST00000609021 FOXD4L1Q9NU39 408 aa5.58□□□□□ -1.52
HDDC2-208ENST00000609021 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.58□□□□□ -1.52
HDDC2-208ENST00000609021 MRFAP1Q9Y605 127 aa5.58□□□□□ -1.52
HDDC2-208ENST00000609021 CEP152O94986 1710 aa5.58□□□□□ -1.52
HDDC2-208ENST00000609021 PTPRGP23470 1445 aa5.58□□□□□ -1.52
HDDC2-208ENST00000609021 NUCB2P80303 420 aa5.57□□□□□ -1.52
HDDC2-208ENST00000609021 CCDC15Q0P6D6 951 aa5.57□□□□□ -1.52
HDDC2-208ENST00000609021 DZIP3Q86Y13 1208 aaKnown RBP5.57□□□□□ -1.52
HDDC2-208ENST00000609021 KIF18AQ8NI77 898 aa5.57□□□□□ -1.52
HDDC2-208ENST00000609021 CCDC26Q8TAB7 109 aa5.57□□□□□ -1.52
HDDC2-208ENST00000609021 CWC25Q9NXE8 425 aaPredicted RBP5.57□□□□□ -1.52
HDDC2-208ENST00000609021 TMOD4Q9NZQ9 345 aa5.57□□□□□ -1.52
HDDC2-208ENST00000609021 ABCC5O15440 1437 aa5.57□□□□□ -1.52
HDDC2-208ENST00000609021 NAIPQ13075 1403 aa5.57□□□□□ -1.52
HDDC2-208ENST00000609021 CCDC70Q6NSX1 233 aa5.57□□□□□ -1.52
HDDC2-208ENST00000609021 LEKR1Q6ZMV7 388 aa5.57□□□□□ -1.52
HDDC2-208ENST00000609021 CCDC186Q7Z3E2 898 aa5.57□□□□□ -1.52
HDDC2-208ENST00000609021 SMCR8Q8TEV9 937 aaPredicted RBP5.57□□□□□ -1.52
HDDC2-208ENST00000609021 RMDN2Q96LZ7 410 aa5.57□□□□□ -1.52
HDDC2-208ENST00000609021 DDX41Q9UJV9 622 aaKnown RBP5.57□□□□□ -1.52
HDDC2-208ENST00000609021 WWC3Q9ULE0 1092 aa5.57□□□□□ -1.52
HDDC2-208ENST00000609021 SUGT1Q9Y2Z0 365 aa5.57□□□□□ -1.52
HDDC2-208ENST00000609021 HFM1A2PYH4 1435 aa5.57□□□□□ -1.52
HDDC2-208ENST00000609021 PPFIA4O75335 1185 aa5.57□□□□□ -1.52
HDDC2-208ENST00000609021 SKILP12757 684 aa5.57□□□□□ -1.52
HDDC2-208ENST00000609021 LMNB1P20700 586 aa5.57□□□□□ -1.52
HDDC2-208ENST00000609021 GCKP35557 465 aa5.57□□□□□ -1.52
HDDC2-208ENST00000609021 MAGEA9P43362 315 aa5.57□□□□□ -1.52
HDDC2-208ENST00000609021 FAM114A1Q8IWE2 563 aa5.57□□□□□ -1.52
HDDC2-208ENST00000609021 SPC24Q8NBT2 197 aa5.57□□□□□ -1.52
HDDC2-208ENST00000609021 SPRYD3Q8NCJ5 442 aa5.57□□□□□ -1.52
HDDC2-208ENST00000609021 TRIM11Q96F44 468 aa5.57□□□□□ -1.52
HDDC2-208ENST00000609021 ZNF219Q9P2Y4 722 aaPredicted RBP5.57□□□□□ -1.52
HDDC2-208ENST00000609021 PIK3C2BO00750 1634 aa5.57□□□□□ -1.52
HDDC2-208ENST00000609021 ZMYM4Q5VZL5 1548 aa5.56□□□□□ -1.52
HDDC2-208ENST00000609021 MYBL2P10244 700 aa5.56□□□□□ -1.52
HDDC2-208ENST00000609021 VCAM1P19320 739 aa5.56□□□□□ -1.52
HDDC2-208ENST00000609021 CYP2C19P33261 490 aa5.56□□□□□ -1.52
HDDC2-208ENST00000609021 SH3BGRP55822 239 aaPredicted RBP5.56□□□□□ -1.52
HDDC2-208ENST00000609021 NBPF8Q3BBV2 869 aa5.56□□□□□ -1.52
HDDC2-208ENST00000609021 TRIM42Q8IWZ5 723 aa5.56□□□□□ -1.52
HDDC2-208ENST00000609021 CCDC82Q8N4S0 544 aa5.56□□□□□ -1.52
HDDC2-208ENST00000609021 UNC45AQ9H3U1 944 aa5.56□□□□□ -1.52
HDDC2-208ENST00000609021 LRRFIP2Q9Y608 721 aaKnown RBP5.56□□□□□ -1.52
HDDC2-208ENST00000609021 A0A1B0GUA9 196 aa5.56□□□□□ -1.52
HDDC2-208ENST00000609021 MAP4K4O95819 1239 aaPredicted RBP5.56□□□□□ -1.52
HDDC2-208ENST00000609021 TPP2P29144 1249 aaPredicted RBP5.56□□□□□ -1.52
HDDC2-208ENST00000609021 ABL2P42684 1182 aa5.56□□□□□ -1.52
HDDC2-208ENST00000609021 SEPT14Q6ZU15 432 aa5.56□□□□□ -1.52
HDDC2-208ENST00000609021 KIAA1328Q86T90 577 aa5.56□□□□□ -1.52
HDDC2-208ENST00000609021 IQCF2Q8IXL9 164 aa5.56□□□□□ -1.52
HDDC2-208ENST00000609021 TTC30BQ8N4P2 665 aa5.56□□□□□ -1.52
HDDC2-208ENST00000609021 SYAP1Q96A49 352 aaPredicted RBP5.56□□□□□ -1.52
HDDC2-208ENST00000609021 STK31Q9BXU1 1019 aa5.56□□□□□ -1.52
HDDC2-208ENST00000609021 SUN2Q9UH99 717 aa5.56□□□□□ -1.52
HDDC2-208ENST00000609021 RRP15Q9Y3B9 282 aaKnown RBP5.56□□□□□ -1.52
HDDC2-208ENST00000609021 MORC2Q9Y6X9 1032 aaPredicted RBP5.56□□□□□ -1.52
HDDC2-208ENST00000609021 PZPP20742 1482 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms