RNA–Protein interactions for RNA: ENST00000608657.5

ITGB5-212, Transcript of integrin subunit beta 5, humanhuman

TSL 3

Gene ITGB5, Length 825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB5-212ENST00000608657 LRRC4BQ9NT99 713 aa11.44□□□□□ -0.58
ITGB5-212ENST00000608657 TUBGCP6Q96RT7 1819 aa11.44□□□□□ -0.58
ITGB5-212ENST00000608657 MYH14Q7Z406 1995 aaKnown RBP11.43□□□□□ -0.58
ITGB5-212ENST00000608657 SOS1Q07889 1333 aaPredicted RBP11.43□□□□□ -0.58
ITGB5-212ENST00000608657 UBR3Q6ZT12 1888 aa11.43□□□□□ -0.58
ITGB5-212ENST00000608657 PRAMEF22A3QJZ6 481 aa11.43□□□□□ -0.58
ITGB5-212ENST00000608657 STARD3NLO95772 234 aa11.43□□□□□ -0.58
ITGB5-212ENST00000608657 TWISTNBQ3B726 338 aaPredicted RBP11.43□□□□□ -0.58
ITGB5-212ENST00000608657 TRMT2AQ8IZ69 625 aaKnown RBP11.43□□□□□ -0.58
ITGB5-212ENST00000608657 C8orf58Q8NAV2 365 aa11.43□□□□□ -0.58
ITGB5-212ENST00000608657 LINC00116Q8NCU8 138 aa11.43□□□□□ -0.58
ITGB5-212ENST00000608657 CNTNAP4Q9C0A0 1308 aa11.42□□□□□ -0.58
ITGB5-212ENST00000608657 SOCS7O14512 581 aa11.42□□□□□ -0.58
ITGB5-212ENST00000608657 EIF2S2P20042 333 aaKnown RBP11.42□□□□□ -0.58
ITGB5-212ENST00000608657 HDGFL1Q5TGJ6 251 aa11.42□□□□□ -0.58
ITGB5-212ENST00000608657 AK7Q96M32 723 aa11.42□□□□□ -0.58
ITGB5-212ENST00000608657 CHMP4AQ9BY43 222 aa11.42□□□□□ -0.58
ITGB5-212ENST00000608657 USP16Q9Y5T5 823 aa11.42□□□□□ -0.58
ITGB5-212ENST00000608657 QSER1Q2KHR3 1735 aa11.42□□□□□ -0.58
ITGB5-212ENST00000608657 CYP19A1P11511 503 aaPredicted RBP11.41□□□□□ -0.58
ITGB5-212ENST00000608657 CRKLP46109 303 aaKnown RBP11.41□□□□□ -0.58
ITGB5-212ENST00000608657 TSPYL6Q8N831 410 aa11.41□□□□□ -0.58
ITGB5-212ENST00000608657 NECTIN2Q92692 538 aa11.41□□□□□ -0.58
ITGB5-212ENST00000608657 CCDC87Q9NVE4 849 aa11.41□□□□□ -0.58
ITGB5-212ENST00000608657 STK32BQ9NY57 414 aa11.41□□□□□ -0.58
ITGB5-212ENST00000608657 CACNA1FO60840 1977 aa11.41□□□□□ -0.58
ITGB5-212ENST00000608657 ERBB4Q15303 1308 aa11.4□□□□□ -0.58
ITGB5-212ENST00000608657 RC3H1Q5TC82 1133 aaKnown RBP11.4□□□□□ -0.58
ITGB5-212ENST00000608657 NBPF14Q5TI25 921 aa11.4□□□□□ -0.58
ITGB5-212ENST00000608657 ZBTB1Q9Y2K1 713 aa11.4□□□□□ -0.58
ITGB5-212ENST00000608657 GNPATO15228 680 aa11.39□□□□□ -0.59
ITGB5-212ENST00000608657 C4AP0C0L4 1744 aa11.39□□□□□ -0.59
ITGB5-212ENST00000608657 CT47B1P0C2W7 299 aaPredicted RBP11.39□□□□□ -0.59
ITGB5-212ENST00000608657 CANXP27824 592 aaKnown RBP11.39□□□□□ -0.59
ITGB5-212ENST00000608657 ZNF827Q17R98 1081 aa11.39□□□□□ -0.59
ITGB5-212ENST00000608657 CCDC30Q5VVM6 783 aa11.39□□□□□ -0.59
ITGB5-212ENST00000608657 NPM2Q86SE8 214 aaKnown RBP11.39□□□□□ -0.59
ITGB5-212ENST00000608657 STK31Q9BXU1 1019 aa11.39□□□□□ -0.59
ITGB5-212ENST00000608657 ANO8Q9HCE9 1232 aaPredicted RBP11.39□□□□□ -0.59
ITGB5-212ENST00000608657 VAMP4O75379 141 aa11.38□□□□□ -0.59
ITGB5-212ENST00000608657 A1BGP04217 495 aa11.38□□□□□ -0.59
ITGB5-212ENST00000608657 PIP4K2AP48426 406 aaPredicted RBP11.38□□□□□ -0.59
ITGB5-212ENST00000608657 SLC15A2Q16348 729 aa11.38□□□□□ -0.59
ITGB5-212ENST00000608657 INTS5Q6P9B9 1019 aaKnown RBP11.38□□□□□ -0.59
ITGB5-212ENST00000608657 AKT1S1Q96B36 256 aa11.38□□□□□ -0.59
ITGB5-212ENST00000608657 TFCP2L1Q9NZI6 479 aa11.38□□□□□ -0.59
ITGB5-212ENST00000608657 CHPF2Q9P2E5 772 aa11.38□□□□□ -0.59
ITGB5-212ENST00000608657 DBF4Q9UBU7 674 aaPredicted RBP11.38□□□□□ -0.59
ITGB5-212ENST00000608657 RTCBQ9Y3I0 505 aaKnown RBP11.38□□□□□ -0.59
ITGB5-212ENST00000608657 ZNF330Q9Y3S2 320 aaPredicted RBP11.38□□□□□ -0.59
ITGB5-212ENST00000608657 RPS6KA4O75676 772 aa11.37□□□□□ -0.59
ITGB5-212ENST00000608657 PHF14O94880 888 aa11.37□□□□□ -0.59
ITGB5-212ENST00000608657 MYL6BP14649 208 aa11.37□□□□□ -0.59
ITGB5-212ENST00000608657 IL6STP40189 918 aaPredicted RBP11.37□□□□□ -0.59
ITGB5-212ENST00000608657 ZNF428Q96B54 188 aa11.37□□□□□ -0.59
ITGB5-212ENST00000608657 PPP4R2Q9NY27 417 aa11.37□□□□□ -0.59
ITGB5-212ENST00000608657 COL15A1P39059 1388 aa11.37□□□□□ -0.59
ITGB5-212ENST00000608657 SCN7AQ01118 1682 aa11.36□□□□□ -0.59
ITGB5-212ENST00000608657 BCORQ6W2J9 1755 aa11.36□□□□□ -0.59
ITGB5-212ENST00000608657 NBPF26B4DH59 902 aa11.36□□□□□ -0.59
ITGB5-212ENST00000608657 TCERG1O14776 1098 aaKnown RBP11.36□□□□□ -0.59
ITGB5-212ENST00000608657 ANXA1P04083 346 aa11.36□□□□□ -0.59
ITGB5-212ENST00000608657 SSFA2P28290 1259 aa11.36□□□□□ -0.59
ITGB5-212ENST00000608657 NBPF10Q6P3W6 841 aaKnown RBP11.36□□□□□ -0.59
ITGB5-212ENST00000608657 NBPF15Q8N660 670 aa11.36□□□□□ -0.59
ITGB5-212ENST00000608657 FLAD1Q8NFF5 587 aa11.36□□□□□ -0.59
ITGB5-212ENST00000608657 DDX21Q9NR30 783 aaKnown RBP eCLIP11.36□□□□□ -0.59
ITGB5-212ENST00000608657 A0A087WZG4 1122 aa11.35□□□□□ -0.59
ITGB5-212ENST00000608657 ADRA2BP18089 450 aa11.35□□□□□ -0.59
ITGB5-212ENST00000608657 PDIA6Q15084 440 aa11.35□□□□□ -0.59
ITGB5-212ENST00000608657 PROSER3Q2NL68 480 aa11.35□□□□□ -0.59
ITGB5-212ENST00000608657 ALDH1L2Q3SY69 923 aa11.35□□□□□ -0.59
ITGB5-212ENST00000608657 HYPKQ9NX55 129 aa11.35□□□□□ -0.59
ITGB5-212ENST00000608657 PNPLA7Q6ZV29 1317 aa11.35□□□□□ -0.59
ITGB5-212ENST00000608657 ARFGEF2Q9Y6D5 1785 aa11.34□□□□□ -0.59
ITGB5-212ENST00000608657 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.34□□□□□ -0.59
ITGB5-212ENST00000608657 SLC4A2P04920 1241 aa11.34□□□□□ -0.59
ITGB5-212ENST00000608657 EIF5P55010 431 aaKnown RBP11.34□□□□□ -0.59
ITGB5-212ENST00000608657 TRAPPC3LQ5T215 181 aa11.34□□□□□ -0.59
ITGB5-212ENST00000608657 SSH1Q8WYL5 1049 aa11.34□□□□□ -0.59
ITGB5-212ENST00000608657 ARXQ96QS3 562 aa11.34□□□□□ -0.59
ITGB5-212ENST00000608657 SMC4Q9NTJ3 1288 aa11.34□□□□□ -0.59
ITGB5-212ENST00000608657 CASZ1Q86V15 1759 aa11.33□□□□□ -0.59
ITGB5-212ENST00000608657 MSH5O43196 834 aa11.33□□□□□ -0.6
ITGB5-212ENST00000608657 RFC4P35249 363 aa11.33□□□□□ -0.6
ITGB5-212ENST00000608657 AIMP1Q12904 312 aaKnown RBP11.33□□□□□ -0.6
ITGB5-212ENST00000608657 R3HDM1Q15032 1099 aaKnown RBP11.33□□□□□ -0.6
ITGB5-212ENST00000608657 KIF6Q6ZMV9 814 aa11.33□□□□□ -0.6
ITGB5-212ENST00000608657 SMIM5Q71RC9 77 aa11.33□□□□□ -0.6
ITGB5-212ENST00000608657 AMIGO3Q86WK7 504 aa11.33□□□□□ -0.6
ITGB5-212ENST00000608657 DZIP3Q86Y13 1208 aaKnown RBP11.33□□□□□ -0.6
ITGB5-212ENST00000608657 XAGE3Q8WTP9 111 aa11.33□□□□□ -0.6
ITGB5-212ENST00000608657 BCL2L13Q9BXK5 485 aa11.33□□□□□ -0.6
ITGB5-212ENST00000608657 ANKRD36CQ5JPF3 1778 aa11.33□□□□□ -0.6
ITGB5-212ENST00000608657 NUP98P52948 1817 aa11.32□□□□□ -0.6
ITGB5-212ENST00000608657 ZPR1O75312 459 aa11.32□□□□□ -0.6
ITGB5-212ENST00000608657 RARSP54136 660 aaKnown RBP11.32□□□□□ -0.6
ITGB5-212ENST00000608657 COPS6Q7L5N1 327 aa11.32□□□□□ -0.6
ITGB5-212ENST00000608657 LRP10Q7Z4F1 713 aa11.32□□□□□ -0.6
ITGB5-212ENST00000608657 MRPL50Q8N5N7 158 aaKnown RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms