RNA–Protein interactions for RNA: ENST00000608616.5

LINC00893-211, long intergenic non-protein coding RNA 893, human

TSL 2

Gene LINC00893, Length 747 nt, Biotype antisense RNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC00893-211	ENST00000608616	SBF1	O95248	1867 aa		13.92	□□□□□ -0.18
LINC00893-211	ENST00000608616	USP42	Q9H9J4	1324 aa	Known RBP	13.91	□□□□□ -0.18
LINC00893-211	ENST00000608616	CABP4	P57796	275 aa		13.91	□□□□□ -0.18
LINC00893-211	ENST00000608616	COL3A1	P02461	1466 aa	Predicted RBP	13.91	□□□□□ -0.18
LINC00893-211	ENST00000608616	CHRNA5	P30532	468 aa		13.9	□□□□□ -0.18
LINC00893-211	ENST00000608616	CRKL	P46109	303 aa	Known RBP	13.9	□□□□□ -0.18
LINC00893-211	ENST00000608616	SRP68	Q9UHB9	627 aa	Known RBP	13.9	□□□□□ -0.18
LINC00893-211	ENST00000608616	U2SURP	O15042	1029 aa	Known RBP	13.89	□□□□□ -0.19
LINC00893-211	ENST00000608616	PTCD1	O75127	700 aa	Known RBP	13.89	□□□□□ -0.19
LINC00893-211	ENST00000608616	VEGFA	P15692	232 aa	Predicted RBP	13.89	□□□□□ -0.19
LINC00893-211	ENST00000608616	LMNB1	P20700	586 aa		13.89	□□□□□ -0.19
LINC00893-211	ENST00000608616	DDR1	Q08345	913 aa		13.89	□□□□□ -0.19
LINC00893-211	ENST00000608616	FKBP8	Q14318	412 aa		13.89	□□□□□ -0.19
LINC00893-211	ENST00000608616	PLEKHO1	Q53GL0	409 aa	Predicted RBP	13.89	□□□□□ -0.19
LINC00893-211	ENST00000608616	SULT6B1	Q6IMI4	303 aa		13.89	□□□□□ -0.19
LINC00893-211	ENST00000608616	ZNF530	Q6P9A1	599 aa	Predicted RBP	13.89	□□□□□ -0.19
LINC00893-211	ENST00000608616	ZPR1	O75312	459 aa		13.88	□□□□□ -0.19
LINC00893-211	ENST00000608616	RASSF7	Q02833	373 aa		13.88	□□□□□ -0.19
LINC00893-211	ENST00000608616	TIAM2	Q8IVF5	1701 aa		13.87	□□□□□ -0.19
LINC00893-211	ENST00000608616	GLTPD2	A6NH11	291 aa		13.87	□□□□□ -0.19
LINC00893-211	ENST00000608616	C1orf141	Q5JVX7	400 aa		13.87	□□□□□ -0.19
LINC00893-211	ENST00000608616	KDM6A	O15550	1401 aa	Predicted RBP	13.87	□□□□□ -0.19
LINC00893-211	ENST00000608616	POLRMT	O00411	1230 aa	Known RBP	13.86	□□□□□ -0.19
LINC00893-211	ENST00000608616	U2AF1L5	P0DN76	240 aa	Predicted RBP	13.86	□□□□□ -0.19
LINC00893-211	ENST00000608616	U2AF1	Q01081	240 aa	Known RBP eCLIP	13.86	□□□□□ -0.19
LINC00893-211	ENST00000608616	AMOT	Q4VCS5	1084 aa		13.86	□□□□□ -0.19
LINC00893-211	ENST00000608616	AEBP1	Q8IUX7	1158 aa		13.86	□□□□□ -0.19
LINC00893-211	ENST00000608616	HMOX1	P09601	288 aa		13.85	□□□□□ -0.19
LINC00893-211	ENST00000608616	TJP1	Q07157	1748 aa		13.84	□□□□□ -0.19
LINC00893-211	ENST00000608616	PNN	Q9H307	717 aa	Known RBP	13.84	□□□□□ -0.19
LINC00893-211	ENST00000608616	USPL1	Q5W0Q7	1092 aa		13.83	□□□□□ -0.2
LINC00893-211	ENST00000608616	DPY19L2	Q6NUT2	758 aa		13.83	□□□□□ -0.2
LINC00893-211	ENST00000608616	TTLL6	Q8N841	843 aa		13.83	□□□□□ -0.2
LINC00893-211	ENST00000608616	DLEC1	Q9Y238	1755 aa		13.83	□□□□□ -0.2
LINC00893-211	ENST00000608616	NEFM	P07197	916 aa		13.82	□□□□□ -0.2
LINC00893-211	ENST00000608616	WDR43	Q15061	677 aa	Known RBP eCLIP	13.82	□□□□□ -0.2
LINC00893-211	ENST00000608616	NFATC2IP	Q8NCF5	419 aa		13.82	□□□□□ -0.2
LINC00893-211	ENST00000608616	AFDN	P55196	1824 aa	Known RBP	13.82	□□□□□ -0.2
LINC00893-211	ENST00000608616	CCDC88A	Q3V6T2	1871 aa		13.82	□□□□□ -0.2
LINC00893-211	ENST00000608616	TM4SF1	P30408	202 aa		13.81	□□□□□ -0.2
LINC00893-211	ENST00000608616	RSPH6A	Q9H0K4	717 aa		13.81	□□□□□ -0.2
LINC00893-211	ENST00000608616	COL15A1	P39059	1388 aa		13.81	□□□□□ -0.2
LINC00893-211	ENST00000608616	ADAMTS7	Q9UKP4	1686 aa		13.8	□□□□□ -0.2
LINC00893-211	ENST00000608616	PRKAR2B	P31323	418 aa		13.8	□□□□□ -0.2
LINC00893-211	ENST00000608616	NFIX	Q14938	502 aa		13.8	□□□□□ -0.2
LINC00893-211	ENST00000608616	DIEXF	Q68CQ4	756 aa	Known RBP	13.8	□□□□□ -0.2
LINC00893-211	ENST00000608616	INTS5	Q6P9B9	1019 aa	Known RBP	13.8	□□□□□ -0.2
LINC00893-211	ENST00000608616	C2CD5	Q86YS7	1000 aa		13.8	□□□□□ -0.2
LINC00893-211	ENST00000608616	CREBZF	Q9NS37	354 aa		13.8	□□□□□ -0.2
LINC00893-211	ENST00000608616	SOS1	Q07889	1333 aa	Predicted RBP	13.8	□□□□□ -0.2
LINC00893-211	ENST00000608616	NRXN2	Q9P2S2	1712 aa		13.79	□□□□□ -0.2
LINC00893-211	ENST00000608616		H0YIN7	160 aa		13.79	□□□□□ -0.2
LINC00893-211	ENST00000608616	DNAJC10	Q8IXB1	793 aa		13.79	□□□□□ -0.2
LINC00893-211	ENST00000608616	GAS2L2	Q8NHY3	880 aa		13.79	□□□□□ -0.2
LINC00893-211	ENST00000608616	AIDA	Q96BJ3	306 aa		13.79	□□□□□ -0.2
LINC00893-211	ENST00000608616	MKRN1	Q9UHC7	482 aa	Known RBP	13.79	□□□□□ -0.2
LINC00893-211	ENST00000608616	NFKBIE	O00221	500 aa		13.78	□□□□□ -0.2
LINC00893-211	ENST00000608616	SERPINB2	P05120	415 aa		13.78	□□□□□ -0.2
LINC00893-211	ENST00000608616	ERFE	Q4G0M1	354 aa		13.78	□□□□□ -0.2
LINC00893-211	ENST00000608616	CHADL	Q6NUI6	762 aa		13.78	□□□□□ -0.2
LINC00893-211	ENST00000608616	MRS2	Q9HD23	443 aa		13.78	□□□□□ -0.2
LINC00893-211	ENST00000608616	NARF	Q9UHQ1	456 aa		13.78	□□□□□ -0.2
LINC00893-211	ENST00000608616	SCN11A	Q9UI33	1791 aa		13.78	□□□□□ -0.2
LINC00893-211	ENST00000608616	AKAP4	Q5JQC9	854 aa		13.77	□□□□□ -0.21
LINC00893-211	ENST00000608616	MAPK8IP3	Q9UPT6	1336 aa		13.77	□□□□□ -0.21
LINC00893-211	ENST00000608616	DICER1	Q9UPY3	1922 aa	Known RBP	13.76	□□□□□ -0.21
LINC00893-211	ENST00000608616	MTHFSD	Q2M296	383 aa	Known RBP	13.76	□□□□□ -0.21
LINC00893-211	ENST00000608616	CARMIL3	Q8ND23	1372 aa		13.75	□□□□□ -0.21
LINC00893-211	ENST00000608616	CYP19A1	P11511	503 aa	Predicted RBP	13.75	□□□□□ -0.21
LINC00893-211	ENST00000608616	ZNF622	Q969S3	477 aa	Known RBP eCLIP	13.75	□□□□□ -0.21
LINC00893-211	ENST00000608616	PHACTR3	Q96KR7	559 aa		13.75	□□□□□ -0.21
LINC00893-211	ENST00000608616	SLC52A2	Q9HAB3	445 aa		13.75	□□□□□ -0.21
LINC00893-211	ENST00000608616	PRDM10	Q9NQV6	1147 aa		13.75	□□□□□ -0.21
LINC00893-211	ENST00000608616	ADAMTS8	Q9UP79	889 aa		13.75	□□□□□ -0.21
LINC00893-211	ENST00000608616	PDZRN3	Q9UPQ7	1066 aa		13.75	□□□□□ -0.21
LINC00893-211	ENST00000608616	ZBTB1	Q9Y2K1	713 aa		13.75	□□□□□ -0.21
LINC00893-211	ENST00000608616	CNTNAP1	P78357	1384 aa		13.74	□□□□□ -0.21
LINC00893-211	ENST00000608616	IQCA1L	A6NCM1	817 aa		13.74	□□□□□ -0.21
LINC00893-211	ENST00000608616	POTEC	B2RU33	542 aa		13.74	□□□□□ -0.21
LINC00893-211	ENST00000608616	FOXN1	O15353	648 aa		13.74	□□□□□ -0.21
LINC00893-211	ENST00000608616	CTCF	P49711	727 aa	Predicted RBP	13.74	□□□□□ -0.21
LINC00893-211	ENST00000608616	BICDL1	Q6ZP65	573 aa		13.74	□□□□□ -0.21
LINC00893-211	ENST00000608616	PLEKHF1	Q96S99	279 aa		13.74	□□□□□ -0.21
LINC00893-211	ENST00000608616	TAOK3	Q9H2K8	898 aa		13.74	□□□□□ -0.21
LINC00893-211	ENST00000608616	ZNF219	Q9P2Y4	722 aa	Predicted RBP	13.74	□□□□□ -0.21
LINC00893-211	ENST00000608616	MRC1	P22897	1456 aa		13.74	□□□□□ -0.21
LINC00893-211	ENST00000608616	GNAT3	A8MTJ3	354 aa		13.73	□□□□□ -0.21
LINC00893-211	ENST00000608616	NPHP1	O15259	732 aa		13.73	□□□□□ -0.21
LINC00893-211	ENST00000608616	C21orf2	O43822	256 aa		13.73	□□□□□ -0.21
LINC00893-211	ENST00000608616	PDE6B	P35913	854 aa		13.73	□□□□□ -0.21
LINC00893-211	ENST00000608616	FER1L6	Q2WGJ9	1857 aa		13.73	□□□□□ -0.21
LINC00893-211	ENST00000608616	LTBP3	Q9NS15	1303 aa		13.72	□□□□□ -0.21
LINC00893-211	ENST00000608616		A0A087WZG4	1122 aa		13.72	□□□□□ -0.21
LINC00893-211	ENST00000608616	CCER2	I3L3R5	266 aa		13.72	□□□□□ -0.21
LINC00893-211	ENST00000608616	SLC39A6	Q13433	755 aa		13.72	□□□□□ -0.21
LINC00893-211	ENST00000608616	CCDC184	Q52MB2	194 aa		13.72	□□□□□ -0.21
LINC00893-211	ENST00000608616	PNISR	Q8TF01	805 aa	Known RBP	13.72	□□□□□ -0.21
LINC00893-211	ENST00000608616	RUNDC1	Q96C34	613 aa		13.72	□□□□□ -0.21
LINC00893-211	ENST00000608616	HTATSF1	O43719	755 aa	Known RBP	13.71	□□□□□ -0.21
LINC00893-211	ENST00000608616	STARD3NL	O95772	234 aa		13.71	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms