RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 TRAK1Q9UPV9 953 aa14.97□□□□□ -0.01
CTCFL-218ENST00000608440 RRP15Q9Y3B9 282 aaKnown RBP14.97□□□□□ -0.01
CTCFL-218ENST00000608440 GSPT1P15170 499 aaKnown RBP14.97□□□□□ -0.01
CTCFL-218ENST00000608440 SRLQ86TD4 932 aa14.97□□□□□ -0.01
CTCFL-218ENST00000608440 PACS2Q86VP3 889 aa14.97□□□□□ -0.01
CTCFL-218ENST00000608440 TSGA10IPQ3SY00 556 aa14.96□□□□□ -0.01
CTCFL-218ENST00000608440 SSH1Q8WYL5 1049 aa14.96□□□□□ -0.01
CTCFL-218ENST00000608440 TMX3Q96JJ7 454 aa14.96□□□□□ -0.01
CTCFL-218ENST00000608440 SETBP1Q9Y6X0 1596 aa14.96□□□□□ -0.01
CTCFL-218ENST00000608440 PNMA6AP0CW24 399 aaPredicted RBP14.96□□□□□ -0.01
CTCFL-218ENST00000608440 PTPRCP08575 1304 aa14.96□□□□□ -0.02
CTCFL-218ENST00000608440 ERCC6LQ2NKX8 1250 aa14.95□□□□□ -0.02
CTCFL-218ENST00000608440 TTC31Q49AM3 519 aaPredicted RBP14.95□□□□□ -0.02
CTCFL-218ENST00000608440 ERO1AQ96HE7 468 aa14.95□□□□□ -0.02
CTCFL-218ENST00000608440 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.95□□□□□ -0.02
CTCFL-218ENST00000608440 ZFYVE9O95405 1425 aa14.95□□□□□ -0.02
CTCFL-218ENST00000608440 A0A1B0GUL7 405 aa14.95□□□□□ -0.02
CTCFL-218ENST00000608440 USP27XA6NNY8 438 aa14.95□□□□□ -0.02
CTCFL-218ENST00000608440 EGFL6Q8IUX8 553 aa14.95□□□□□ -0.02
CTCFL-218ENST00000608440 DEF6Q9H4E7 631 aa14.95□□□□□ -0.02
CTCFL-218ENST00000608440 RIMS2Q9UQ26 1411 aa14.95□□□□□ -0.02
CTCFL-218ENST00000608440 HTATSF1O43719 755 aaKnown RBP14.94□□□□□ -0.02
CTCFL-218ENST00000608440 CLCN6P51797 869 aa14.94□□□□□ -0.02
CTCFL-218ENST00000608440 NEK4P51957 841 aa14.94□□□□□ -0.02
CTCFL-218ENST00000608440 ZSCAN25Q6NSZ9 544 aa14.94□□□□□ -0.02
CTCFL-218ENST00000608440 CWC15Q9P013 229 aaKnown RBP14.94□□□□□ -0.02
CTCFL-218ENST00000608440 FER1L4A9Z1Z3 1794 aa14.94□□□□□ -0.02
CTCFL-218ENST00000608440 CXorf56Q9H5V9 222 aa14.94□□□□□ -0.02
CTCFL-218ENST00000608440 CNPY2Q9Y2B0 182 aa14.94□□□□□ -0.02
CTCFL-218ENST00000608440 EXOSC9Q06265 439 aaKnown RBP14.94□□□□□ -0.02
CTCFL-218ENST00000608440 WDR63Q8IWG1 891 aa14.94□□□□□ -0.02
CTCFL-218ENST00000608440 TPM4P67936 248 aa14.93□□□□□ -0.02
CTCFL-218ENST00000608440 RUNDC1Q96C34 613 aa14.93□□□□□ -0.02
CTCFL-218ENST00000608440 TRMT1Q9NXH9 659 aaKnown RBP14.93□□□□□ -0.02
CTCFL-218ENST00000608440 ERBB3P21860 1342 aa14.93□□□□□ -0.02
CTCFL-218ENST00000608440 ATP2B1P20020 1258 aa14.93□□□□□ -0.02
CTCFL-218ENST00000608440 SLFNL1Q499Z3 407 aa14.93□□□□□ -0.02
CTCFL-218ENST00000608440 SLU7O95391 586 aaKnown RBP14.92□□□□□ -0.02
CTCFL-218ENST00000608440 GPS2Q13227 327 aa14.92□□□□□ -0.02
CTCFL-218ENST00000608440 PTPN14Q15678 1187 aa14.92□□□□□ -0.02
CTCFL-218ENST00000608440 STK26Q9P289 416 aa14.92□□□□□ -0.02
CTCFL-218ENST00000608440 SUFUQ9UMX1 484 aa14.92□□□□□ -0.02
CTCFL-218ENST00000608440 ASXL1Q8IXJ9 1541 aa14.92□□□□□ -0.02
CTCFL-218ENST00000608440 LUZP1Q86V48 1076 aa14.92□□□□□ -0.02
CTCFL-218ENST00000608440 CACTINQ8WUQ7 758 aaKnown RBP14.92□□□□□ -0.02
CTCFL-218ENST00000608440 C3P01024 1663 aa14.91□□□□□ -0.02
CTCFL-218ENST00000608440 LRRN4CLQ8ND94 238 aa14.91□□□□□ -0.02
CTCFL-218ENST00000608440 FUCA2Q9BTY2 467 aa14.91□□□□□ -0.02
CTCFL-218ENST00000608440 DONSONQ9NYP3 566 aa14.91□□□□□ -0.02
CTCFL-218ENST00000608440 ANKRD65E5RJM6 399 aa14.9□□□□□ -0.02
CTCFL-218ENST00000608440 FIBPO43427 364 aa14.9□□□□□ -0.02
CTCFL-218ENST00000608440 H2AFXP16104 143 aaPredicted RBP14.9□□□□□ -0.02
CTCFL-218ENST00000608440 TDO2P48775 406 aa14.9□□□□□ -0.02
CTCFL-218ENST00000608440 LMAN1P49257 510 aa14.9□□□□□ -0.02
CTCFL-218ENST00000608440 SATB1Q01826 763 aa14.9□□□□□ -0.02
CTCFL-218ENST00000608440 TRIM5Q9C035 493 aa14.9□□□□□ -0.02
CTCFL-218ENST00000608440 SYTL4Q96C24 671 aaPredicted RBP14.9□□□□□ -0.02
CTCFL-218ENST00000608440 NOM1Q5C9Z4 860 aaKnown RBP14.89□□□□□ -0.03
CTCFL-218ENST00000608440 FBXO18Q8NFZ0 1043 aa14.89□□□□□ -0.03
CTCFL-218ENST00000608440 SEC31AO94979 1220 aaKnown RBP14.89□□□□□ -0.03
CTCFL-218ENST00000608440 OAS2P29728 719 aaKnown RBP14.89□□□□□ -0.03
CTCFL-218ENST00000608440 SAFB2Q14151 953 aaKnown RBP eCLIP14.89□□□□□ -0.03
CTCFL-218ENST00000608440 ARHGAP29Q52LW3 1261 aa14.89□□□□□ -0.03
CTCFL-218ENST00000608440 INTS3Q68E01 1043 aaKnown RBP14.89□□□□□ -0.03
CTCFL-218ENST00000608440 GCC1Q96CN9 775 aa14.89□□□□□ -0.03
CTCFL-218ENST00000608440 ARID5BQ14865 1188 aa14.88□□□□□ -0.03
CTCFL-218ENST00000608440 CCDC91Q7Z6B0 441 aa14.88□□□□□ -0.03
CTCFL-218ENST00000608440 C16orf71Q8IYS4 520 aaPredicted RBP14.88□□□□□ -0.03
CTCFL-218ENST00000608440 CHMP3Q9Y3E7 222 aa14.88□□□□□ -0.03
CTCFL-218ENST00000608440 MYO3AQ8NEV4 1616 aa14.88□□□□□ -0.03
CTCFL-218ENST00000608440 ALKQ9UM73 1620 aa14.88□□□□□ -0.03
CTCFL-218ENST00000608440 CCDC27Q2M243 656 aa14.88□□□□□ -0.03
CTCFL-218ENST00000608440 SRCIN1Q9C0H9 1055 aa14.88□□□□□ -0.03
CTCFL-218ENST00000608440 CCDC144BQ3MJ40 725 aa14.87□□□□□ -0.03
CTCFL-218ENST00000608440 TMCO3Q6UWJ1 677 aa14.87□□□□□ -0.03
CTCFL-218ENST00000608440 CCDC144CPQ8IYA2 1237 aa14.87□□□□□ -0.03
CTCFL-218ENST00000608440 GOLGA5Q8TBA6 731 aa14.87□□□□□ -0.03
CTCFL-218ENST00000608440 CCDC34Q96HJ3 373 aa14.87□□□□□ -0.03
CTCFL-218ENST00000608440 GOLIM4O00461 696 aa14.87□□□□□ -0.03
CTCFL-218ENST00000608440 UBR1Q8IWV7 1749 aa14.87□□□□□ -0.03
CTCFL-218ENST00000608440 QRICH2Q9H0J4 1663 aa14.87□□□□□ -0.03
CTCFL-218ENST00000608440 PPIP5K1Q6PFW1 1433 aa14.87□□□□□ -0.03
CTCFL-218ENST00000608440 UBE2HP62256 183 aa14.86□□□□□ -0.03
CTCFL-218ENST00000608440 FAM43BQ6ZT52 329 aaPredicted RBP14.86□□□□□ -0.03
CTCFL-218ENST00000608440 PLEKHM2Q8IWE5 1019 aa14.86□□□□□ -0.03
CTCFL-218ENST00000608440 RNF217Q8TC41 542 aa14.86□□□□□ -0.03
CTCFL-218ENST00000608440 PLEKHG2Q9H7P9 1386 aa14.86□□□□□ -0.03
CTCFL-218ENST00000608440 TMEM2Q9UHN6 1383 aa14.86□□□□□ -0.03
CTCFL-218ENST00000608440 CCDC192P0DO97 292 aa14.86□□□□□ -0.03
CTCFL-218ENST00000608440 MAGEA9P43362 315 aa14.86□□□□□ -0.03
CTCFL-218ENST00000608440 GORABQ5T7V8 394 aa14.86□□□□□ -0.03
CTCFL-218ENST00000608440 CNKSR2Q8WXI2 1034 aa14.86□□□□□ -0.03
CTCFL-218ENST00000608440 PHF23Q9BUL5 403 aaPredicted RBP14.86□□□□□ -0.03
CTCFL-218ENST00000608440 CLIP2Q9UDT6 1046 aa14.86□□□□□ -0.03
CTCFL-218ENST00000608440 IRF6O14896 467 aa14.86□□□□□ -0.03
CTCFL-218ENST00000608440 GRIPAP1Q4V328 841 aa14.86□□□□□ -0.03
CTCFL-218ENST00000608440 SBNO2Q9Y2G9 1366 aa14.86□□□□□ -0.03
CTCFL-218ENST00000608440 ARHGEF28Q8N1W1 1705 aaKnown RBP14.85□□□□□ -0.03
CTCFL-218ENST00000608440 YTHDC2Q9H6S0 1430 aaKnown RBP14.85□□□□□ -0.03
CTCFL-218ENST00000608440 RIMS1Q86UR5 1692 aaKnown RBP14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms