RNA–Protein interactions for RNA: ENST00000607187.1

CTSA-215, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 509 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-215ENST00000607187 RBM42Q9BTD8 480 aaKnown RBP13.31□□□□□ -0.28
CTSA-215ENST00000607187 DLG5Q8TDM6 1919 aa13.31□□□□□ -0.28
CTSA-215ENST00000607187 TJP1Q07157 1748 aa13.3□□□□□ -0.28
CTSA-215ENST00000607187 UBR2Q8IWV8 1755 aa13.3□□□□□ -0.28
CTSA-215ENST00000607187 FLAD1Q8NFF5 587 aa13.3□□□□□ -0.28
CTSA-215ENST00000607187 PTCD1O75127 700 aaKnown RBP13.29□□□□□ -0.28
CTSA-215ENST00000607187 IL17REQ8NFR9 667 aa13.29□□□□□ -0.28
CTSA-215ENST00000607187 MYBBP1AQ9BQG0 1328 aaKnown RBP13.29□□□□□ -0.28
CTSA-215ENST00000607187 CEMIPQ8WUJ3 1361 aa13.29□□□□□ -0.28
CTSA-215ENST00000607187 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.28□□□□□ -0.28
CTSA-215ENST00000607187 SSFA2P28290 1259 aa13.28□□□□□ -0.28
CTSA-215ENST00000607187 NUBP1P53384 320 aa13.28□□□□□ -0.28
CTSA-215ENST00000607187 KCPQ6ZWJ8 1503 aa13.28□□□□□ -0.28
CTSA-215ENST00000607187 GNPATO15228 680 aa13.27□□□□□ -0.29
CTSA-215ENST00000607187 SLC39A6Q13433 755 aa13.27□□□□□ -0.29
CTSA-215ENST00000607187 RC3H1Q5TC82 1133 aaKnown RBP13.27□□□□□ -0.29
CTSA-215ENST00000607187 ARXQ96QS3 562 aa13.27□□□□□ -0.29
CTSA-215ENST00000607187 CNTNAP4Q9C0A0 1308 aa13.27□□□□□ -0.29
CTSA-215ENST00000607187 PHF14O94880 888 aa13.26□□□□□ -0.29
CTSA-215ENST00000607187 POLD1P28340 1107 aa13.26□□□□□ -0.29
CTSA-215ENST00000607187 SMIM5Q71RC9 77 aa13.26□□□□□ -0.29
CTSA-215ENST00000607187 PLEKHF1Q96S99 279 aa13.26□□□□□ -0.29
CTSA-215ENST00000607187 PRKRIP1Q9H875 184 aaPredicted RBP13.26□□□□□ -0.29
CTSA-215ENST00000607187 TEFQ10587 303 aa13.25□□□□□ -0.29
CTSA-215ENST00000607187 DCAF8Q5TAQ9 597 aa13.25□□□□□ -0.29
CTSA-215ENST00000607187 FHDC1Q9C0D6 1143 aaPredicted RBP13.25□□□□□ -0.29
CTSA-215ENST00000607187 RTCBQ9Y3I0 505 aaKnown RBP13.25□□□□□ -0.29
CTSA-215ENST00000607187 C4AP0C0L4 1744 aa13.25□□□□□ -0.29
CTSA-215ENST00000607187 ZNF316A6NFI3 1004 aaPredicted RBP13.24□□□□□ -0.29
CTSA-215ENST00000607187 STK25O00506 426 aa13.24□□□□□ -0.29
CTSA-215ENST00000607187 HTATSF1O43719 755 aaKnown RBP13.24□□□□□ -0.29
CTSA-215ENST00000607187 SYT17Q9BSW7 474 aa13.24□□□□□ -0.29
CTSA-215ENST00000607187 PNNQ9H307 717 aaKnown RBP13.24□□□□□ -0.29
CTSA-215ENST00000607187 RPS6KA4O75676 772 aa13.23□□□□□ -0.29
CTSA-215ENST00000607187 NEFMP07197 916 aa13.23□□□□□ -0.29
CTSA-215ENST00000607187 CRKLP46109 303 aaKnown RBP13.23□□□□□ -0.29
CTSA-215ENST00000607187 TRAPPC3LQ5T215 181 aa13.23□□□□□ -0.29
CTSA-215ENST00000607187 MSL1Q68DK7 614 aa13.23□□□□□ -0.29
CTSA-215ENST00000607187 ZNF790Q6PG37 636 aa13.23□□□□□ -0.29
CTSA-215ENST00000607187 DNAJC10Q8IXB1 793 aa13.23□□□□□ -0.29
CTSA-215ENST00000607187 RTF1Q92541 710 aaKnown RBP13.23□□□□□ -0.29
CTSA-215ENST00000607187 INTS5Q6P9B9 1019 aaKnown RBP13.22□□□□□ -0.29
CTSA-215ENST00000607187 MCM10Q7L590 875 aa13.22□□□□□ -0.29
CTSA-215ENST00000607187 TTC5Q8N0Z6 440 aa13.22□□□□□ -0.29
CTSA-215ENST00000607187 BTBD11A6QL63 1104 aa13.21□□□□□ -0.29
CTSA-215ENST00000607187 CYP19A1P11511 503 aaPredicted RBP13.21□□□□□ -0.29
CTSA-215ENST00000607187 DCTN1Q14203 1278 aa13.21□□□□□ -0.29
CTSA-215ENST00000607187 NFE2L2Q16236 605 aa13.21□□□□□ -0.29
CTSA-215ENST00000607187 ARHGEF1Q92888 912 aaKnown RBP13.21□□□□□ -0.29
CTSA-215ENST00000607187 ZNF496Q96IT1 587 aaPredicted RBP13.21□□□□□ -0.29
CTSA-215ENST00000607187 MAPK8IP3Q9UPT6 1336 aa13.2□□□□□ -0.3
CTSA-215ENST00000607187 CCDC87Q9NVE4 849 aa13.2□□□□□ -0.3
CTSA-215ENST00000607187 HEG1Q9ULI3 1381 aa13.2□□□□□ -0.3
CTSA-215ENST00000607187 KCNQ3O43525 872 aa13.19□□□□□ -0.3
CTSA-215ENST00000607187 RFC4P35249 363 aa13.19□□□□□ -0.3
CTSA-215ENST00000607187 ERICH6Q7L0X2 663 aa13.19□□□□□ -0.3
CTSA-215ENST00000607187 FMNL2Q96PY5 1086 aa13.19□□□□□ -0.3
CTSA-215ENST00000607187 SOS1Q07889 1333 aaPredicted RBP13.18□□□□□ -0.3
CTSA-215ENST00000607187 KDM3BQ7LBC6 1761 aa13.18□□□□□ -0.3
CTSA-215ENST00000607187 STARD3NLO95772 234 aa13.18□□□□□ -0.3
CTSA-215ENST00000607187 TAF7Q15545 349 aaPredicted RBP13.18□□□□□ -0.3
CTSA-215ENST00000607187 TMEM132AQ24JP5 1023 aa13.18□□□□□ -0.3
CTSA-215ENST00000607187 TEX13AQ9BXU3 409 aaPredicted RBP13.18□□□□□ -0.3
CTSA-215ENST00000607187 GYS1P13807 737 aa13.17□□□□□ -0.3
CTSA-215ENST00000607187 WDR43Q15061 677 aaKnown RBP eCLIP13.17□□□□□ -0.3
CTSA-215ENST00000607187 NLGN1Q8N2Q7 840 aa13.17□□□□□ -0.3
CTSA-215ENST00000607187 ADAMTS8Q9UP79 889 aa13.17□□□□□ -0.3
CTSA-215ENST00000607187 ZBTB1Q9Y2K1 713 aa13.17□□□□□ -0.3
CTSA-215ENST00000607187 USP42Q9H9J4 1324 aaKnown RBP13.16□□□□□ -0.3
CTSA-215ENST00000607187 KIF13BQ9NQT8 1826 aa13.16□□□□□ -0.3
CTSA-215ENST00000607187 TMPOP42166 694 aaKnown RBP13.16□□□□□ -0.3
CTSA-215ENST00000607187 CD2APQ9Y5K6 639 aa13.16□□□□□ -0.3
CTSA-215ENST00000607187 MMP10P09238 476 aa13.15□□□□□ -0.3
CTSA-215ENST00000607187 RIPK4P57078 832 aa13.15□□□□□ -0.3
CTSA-215ENST00000607187 CCDC146Q8IYE0 955 aa13.15□□□□□ -0.3
CTSA-215ENST00000607187 NLGN2Q8NFZ4 835 aa13.15□□□□□ -0.3
CTSA-215ENST00000607187 RUNDC1Q96C34 613 aa13.15□□□□□ -0.3
CTSA-215ENST00000607187 THUMPD2Q9BTF0 503 aaKnown RBP13.15□□□□□ -0.3
CTSA-215ENST00000607187 COL15A1P39059 1388 aa13.15□□□□□ -0.3
CTSA-215ENST00000607187 CHD4Q14839 1912 aa13.15□□□□□ -0.3
CTSA-215ENST00000607187 EIF5P55010 431 aaKnown RBP13.14□□□□□ -0.31
CTSA-215ENST00000607187 PNISRQ8TF01 805 aaKnown RBP13.14□□□□□ -0.31
CTSA-215ENST00000607187 MIS18AQ9NYP9 233 aa13.14□□□□□ -0.31
CTSA-215ENST00000607187 SRP68Q9UHB9 627 aaKnown RBP13.14□□□□□ -0.31
CTSA-215ENST00000607187 LAMB4A4D0S4 1761 aa13.14□□□□□ -0.31
CTSA-215ENST00000607187 ZPR1O75312 459 aa13.13□□□□□ -0.31
CTSA-215ENST00000607187 SNRPA1P09661 255 aaKnown RBP13.13□□□□□ -0.31
CTSA-215ENST00000607187 CANXP27824 592 aaKnown RBP13.13□□□□□ -0.31
CTSA-215ENST00000607187 NARFQ9UHQ1 456 aa13.13□□□□□ -0.31
CTSA-215ENST00000607187 USP16Q9Y5T5 823 aa13.13□□□□□ -0.31
CTSA-215ENST00000607187 PRAMEF22A3QJZ6 481 aa13.12□□□□□ -0.31
CTSA-215ENST00000607187 A1BGP04217 495 aa13.12□□□□□ -0.31
CTSA-215ENST00000607187 IL6STP40189 918 aaPredicted RBP13.12□□□□□ -0.31
CTSA-215ENST00000607187 LMOD3Q0VAK6 560 aa13.12□□□□□ -0.31
CTSA-215ENST00000607187 USPL1Q5W0Q7 1092 aa13.12□□□□□ -0.31
CTSA-215ENST00000607187 FAM212AQ96EL1 285 aa13.12□□□□□ -0.31
CTSA-215ENST00000607187 RRP7AQ9Y3A4 280 aaKnown RBP13.12□□□□□ -0.31
CTSA-215ENST00000607187 AFDNP55196 1824 aaKnown RBP13.11□□□□□ -0.31
CTSA-215ENST00000607187 KIAA1551Q9HCM1 1747 aa13.11□□□□□ -0.31
CTSA-215ENST00000607187 A0A087WZG4 1122 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms