RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 USP35Q9P2H5 1018 aa15.51■□□□□ 0.07
NEDD8-MDP1-203ENST00000604306 PCDHB15Q9Y5E8 787 aa15.51■□□□□ 0.07
NEDD8-MDP1-203ENST00000604306 AFDNP55196 1824 aaKnown RBP15.51■□□□□ 0.07
NEDD8-MDP1-203ENST00000604306 TJP1Q07157 1748 aa15.51■□□□□ 0.07
NEDD8-MDP1-203ENST00000604306 RREB1Q92766 1687 aa15.51■□□□□ 0.07
NEDD8-MDP1-203ENST00000604306 G2E3Q7L622 706 aa15.5■□□□□ 0.07
NEDD8-MDP1-203ENST00000604306 NGLY1Q96IV0 654 aa15.5■□□□□ 0.07
NEDD8-MDP1-203ENST00000604306 CHPF2Q9P2E5 772 aa15.5■□□□□ 0.07
NEDD8-MDP1-203ENST00000604306 NHSQ6T4R5 1651 aa15.5■□□□□ 0.07
NEDD8-MDP1-203ENST00000604306 DDX58O95786 925 aaKnown RBP15.49■□□□□ 0.07
NEDD8-MDP1-203ENST00000604306 HSPA1LP34931 641 aa15.49■□□□□ 0.07
NEDD8-MDP1-203ENST00000604306 TEX13AQ9BXU3 409 aaPredicted RBP15.49■□□□□ 0.07
NEDD8-MDP1-203ENST00000604306 SBF2Q86WG5 1849 aa15.49■□□□□ 0.07
NEDD8-MDP1-203ENST00000604306 EIF2S2P20042 333 aaKnown RBP15.48■□□□□ 0.07
NEDD8-MDP1-203ENST00000604306 SLC39A6Q13433 755 aa15.48■□□□□ 0.07
NEDD8-MDP1-203ENST00000604306 C8orf37Q96NL8 207 aa15.48■□□□□ 0.07
NEDD8-MDP1-203ENST00000604306 ATRNO75882 1429 aa15.48■□□□□ 0.07
NEDD8-MDP1-203ENST00000604306 GNAI3P08754 354 aa15.47■□□□□ 0.07
NEDD8-MDP1-203ENST00000604306 COL5A3P25940 1745 aaPredicted RBP15.47■□□□□ 0.07
NEDD8-MDP1-203ENST00000604306 RPAP2Q8IXW5 612 aaPredicted RBP15.47■□□□□ 0.07
NEDD8-MDP1-203ENST00000604306 ANKRD36CQ5JPF3 1778 aa15.47■□□□□ 0.07
NEDD8-MDP1-203ENST00000604306 IGHDP01880 384 aa15.46■□□□□ 0.07
NEDD8-MDP1-203ENST00000604306 PDIA6Q15084 440 aa15.46■□□□□ 0.07
NEDD8-MDP1-203ENST00000604306 SMC5Q8IY18 1101 aa15.46■□□□□ 0.07
NEDD8-MDP1-203ENST00000604306 DNAAF4Q8WXU2 420 aa15.46■□□□□ 0.07
NEDD8-MDP1-203ENST00000604306 HDAC5Q9UQL6 1122 aa15.46■□□□□ 0.07
NEDD8-MDP1-203ENST00000604306 ADCY9O60503 1353 aa15.46■□□□□ 0.07
NEDD8-MDP1-203ENST00000604306 ALDH1L1O75891 902 aa15.45■□□□□ 0.06
NEDD8-MDP1-203ENST00000604306 KSR2Q6VAB6 950 aa15.45■□□□□ 0.06
NEDD8-MDP1-203ENST00000604306 GCC1Q96CN9 775 aa15.45■□□□□ 0.06
NEDD8-MDP1-203ENST00000604306 PHAXQ9H814 394 aaKnown RBP15.45■□□□□ 0.06
NEDD8-MDP1-203ENST00000604306 USP21Q9UK80 565 aa15.45■□□□□ 0.06
NEDD8-MDP1-203ENST00000604306 LRP10Q7Z4F1 713 aa15.44■□□□□ 0.06
NEDD8-MDP1-203ENST00000604306 PIGBQ92521 554 aa15.44■□□□□ 0.06
NEDD8-MDP1-203ENST00000604306 BTAF1O14981 1849 aa15.43■□□□□ 0.06
NEDD8-MDP1-203ENST00000604306 ANKRD44Q8N8A2 993 aa15.43■□□□□ 0.06
NEDD8-MDP1-203ENST00000604306 NECTIN2Q92692 538 aa15.43■□□□□ 0.06
NEDD8-MDP1-203ENST00000604306 SRCIN1Q9C0H9 1055 aa15.43■□□□□ 0.06
NEDD8-MDP1-203ENST00000604306 CCDC9Q9Y3X0 531 aaKnown RBP15.43■□□□□ 0.06
NEDD8-MDP1-203ENST00000604306 LY75O60449 1722 aa15.43■□□□□ 0.06
NEDD8-MDP1-203ENST00000604306 F6X3S4 739 aa15.42■□□□□ 0.06
NEDD8-MDP1-203ENST00000604306 ONECUT3O60422 494 aaPredicted RBP15.42■□□□□ 0.06
NEDD8-MDP1-203ENST00000604306 BEND3Q5T5X7 828 aa15.42■□□□□ 0.06
NEDD8-MDP1-203ENST00000604306 MEX3CQ5U5Q3 659 aaKnown RBP15.42■□□□□ 0.06
NEDD8-MDP1-203ENST00000604306 SLC4A10Q6U841 1118 aa15.42■□□□□ 0.06
NEDD8-MDP1-203ENST00000604306 ATG3Q9NT62 314 aa15.42■□□□□ 0.06
NEDD8-MDP1-203ENST00000604306 TRPC5Q9UL62 973 aaPredicted RBP15.42■□□□□ 0.06
NEDD8-MDP1-203ENST00000604306 PRAMEF22A3QJZ6 481 aa15.41■□□□□ 0.06
NEDD8-MDP1-203ENST00000604306 PI4KAP2A4QPH2 592 aa15.41■□□□□ 0.06
NEDD8-MDP1-203ENST00000604306 HMMRO75330 724 aa15.41■□□□□ 0.06
NEDD8-MDP1-203ENST00000604306 GNAI2P04899 355 aa15.41■□□□□ 0.06
NEDD8-MDP1-203ENST00000604306 PI4KAP1Q8N8J0 262 aa15.41■□□□□ 0.06
NEDD8-MDP1-203ENST00000604306 MARCH10Q8NA82 808 aaPredicted RBP15.41■□□□□ 0.06
NEDD8-MDP1-203ENST00000604306 LINS1Q8NG48 757 aa15.41■□□□□ 0.06
NEDD8-MDP1-203ENST00000604306 USP16Q9Y5T5 823 aa15.41■□□□□ 0.06
NEDD8-MDP1-203ENST00000604306 AFF2P51816 1311 aa15.41■□□□□ 0.06
NEDD8-MDP1-203ENST00000604306 COL15A1P39059 1388 aa15.4■□□□□ 0.06
NEDD8-MDP1-203ENST00000604306 PROSER3Q2NL68 480 aa15.4■□□□□ 0.06
NEDD8-MDP1-203ENST00000604306 MEIS3Q99687 375 aa15.4■□□□□ 0.06
NEDD8-MDP1-203ENST00000604306 UTYO14607 1347 aa15.4■□□□□ 0.06
NEDD8-MDP1-203ENST00000604306 NUP98P52948 1817 aa15.39■□□□□ 0.05
NEDD8-MDP1-203ENST00000604306 STARD3NLO95772 234 aa15.39■□□□□ 0.05
NEDD8-MDP1-203ENST00000604306 CEP85Q6P2H3 762 aa15.39■□□□□ 0.05
NEDD8-MDP1-203ENST00000604306 SMARCC1Q92922 1105 aaPredicted RBP15.39■□□□□ 0.05
NEDD8-MDP1-203ENST00000604306 GJD4Q96KN9 370 aaPredicted RBP15.39■□□□□ 0.05
NEDD8-MDP1-203ENST00000604306 BRWD3Q6RI45 1802 aa15.38■□□□□ 0.05
NEDD8-MDP1-203ENST00000604306 TAF1LQ8IZX4 1826 aa15.38■□□□□ 0.05
NEDD8-MDP1-203ENST00000604306 NEXNQ0ZGT2 675 aa15.38■□□□□ 0.05
NEDD8-MDP1-203ENST00000604306 FAM98CQ17RN3 349 aaKnown RBP15.38■□□□□ 0.05
NEDD8-MDP1-203ENST00000604306 PLBD2Q8NHP8 589 aa15.38■□□□□ 0.05
NEDD8-MDP1-203ENST00000604306 USP44Q9H0E7 712 aa15.38■□□□□ 0.05
NEDD8-MDP1-203ENST00000604306 ASAP1Q9ULH1 1129 aa15.38■□□□□ 0.05
NEDD8-MDP1-203ENST00000604306 MAP3K2Q9Y2U5 619 aa15.38■□□□□ 0.05
NEDD8-MDP1-203ENST00000604306 BCORQ6W2J9 1755 aa15.37■□□□□ 0.05
NEDD8-MDP1-203ENST00000604306 UBTFL1P0CB47 393 aaPredicted RBP15.37■□□□□ 0.05
NEDD8-MDP1-203ENST00000604306 NUCB1Q02818 461 aa15.37■□□□□ 0.05
NEDD8-MDP1-203ENST00000604306 ANKRD13DQ6ZTN6 518 aa15.37■□□□□ 0.05
NEDD8-MDP1-203ENST00000604306 SIRT2Q8IXJ6 389 aa15.37■□□□□ 0.05
NEDD8-MDP1-203ENST00000604306 XAGE3Q8WTP9 111 aa15.37■□□□□ 0.05
NEDD8-MDP1-203ENST00000604306 METTL22Q9BUU2 404 aaPredicted RBP15.37■□□□□ 0.05
NEDD8-MDP1-203ENST00000604306 DCTPP1Q9H773 170 aa15.37■□□□□ 0.05
NEDD8-MDP1-203ENST00000604306 ANXA1P04083 346 aa15.36■□□□□ 0.05
NEDD8-MDP1-203ENST00000604306 PRIM1P49642 420 aaKnown RBP15.36■□□□□ 0.05
NEDD8-MDP1-203ENST00000604306 COPS6Q7L5N1 327 aa15.36■□□□□ 0.05
NEDD8-MDP1-203ENST00000604306 TSHZ2Q9NRE2 1034 aa15.36■□□□□ 0.05
NEDD8-MDP1-203ENST00000604306 PDZRN3Q9UPQ7 1066 aa15.36■□□□□ 0.05
NEDD8-MDP1-203ENST00000604306 MYH3P11055 1940 aa15.35■□□□□ 0.05
NEDD8-MDP1-203ENST00000604306 MYH14Q7Z406 1995 aaKnown RBP15.35■□□□□ 0.05
NEDD8-MDP1-203ENST00000604306 NBPF26B4DH59 902 aa15.35■□□□□ 0.05
NEDD8-MDP1-203ENST00000604306 PTCD1O75127 700 aaKnown RBP15.35■□□□□ 0.05
NEDD8-MDP1-203ENST00000604306 MTX1Q13505 466 aa15.35■□□□□ 0.05
NEDD8-MDP1-203ENST00000604306 NBPF14Q5TI25 921 aa15.35■□□□□ 0.05
NEDD8-MDP1-203ENST00000604306 NBPF10Q6P3W6 841 aaKnown RBP15.35■□□□□ 0.05
NEDD8-MDP1-203ENST00000604306 RIC3Q7Z5B4 369 aa15.35■□□□□ 0.05
NEDD8-MDP1-203ENST00000604306 NBPF15Q8N660 670 aa15.35■□□□□ 0.05
NEDD8-MDP1-203ENST00000604306 MYL6BP14649 208 aa15.34■□□□□ 0.05
NEDD8-MDP1-203ENST00000604306 ATP8B2P98198 1209 aa15.34■□□□□ 0.05
NEDD8-MDP1-203ENST00000604306 C1orf115Q9H7X2 142 aa15.34■□□□□ 0.05
NEDD8-MDP1-203ENST00000604306 TUBGCP6Q96RT7 1819 aa15.33■□□□□ 0.05
NEDD8-MDP1-203ENST00000604306 PALLDQ8WX93 1383 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms