RNA–Protein interactions for RNA: ENST00000602868.1

SFXN2-213, Transcript of sideroflexin 2, humanhuman

TSL 2

Gene SFXN2, Length 642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN2-213ENST00000602868 SLC39A6Q13433 755 aa16.98■□□□□ 0.31
SFXN2-213ENST00000602868 TAF7Q15545 349 aaPredicted RBP16.98■□□□□ 0.31
SFXN2-213ENST00000602868 ARHGAP27Q6ZUM4 889 aa16.98■□□□□ 0.31
SFXN2-213ENST00000602868 SMIM5Q71RC9 77 aa16.98■□□□□ 0.31
SFXN2-213ENST00000602868 A0A0G2JLW4 131 aa16.97■□□□□ 0.31
SFXN2-213ENST00000602868 ZPR1O75312 459 aa16.97■□□□□ 0.31
SFXN2-213ENST00000602868 WDR43Q15061 677 aaKnown RBP eCLIP16.97■□□□□ 0.31
SFXN2-213ENST00000602868 RUNDC1Q96C34 613 aa16.97■□□□□ 0.31
SFXN2-213ENST00000602868 TEX13AQ9BXU3 409 aaPredicted RBP16.97■□□□□ 0.31
SFXN2-213ENST00000602868 USP42Q9H9J4 1324 aaKnown RBP16.96■□□□□ 0.31
SFXN2-213ENST00000602868 MAPK8IP3Q9UPT6 1336 aa16.96■□□□□ 0.31
SFXN2-213ENST00000602868 C4AP0C0L4 1744 aa16.96■□□□□ 0.31
SFXN2-213ENST00000602868 COL5A3P25940 1745 aaPredicted RBP16.96■□□□□ 0.31
SFXN2-213ENST00000602868 DPEP1P16444 411 aa16.96■□□□□ 0.31
SFXN2-213ENST00000602868 DALRD3Q5D0E6 543 aaKnown RBP16.96■□□□□ 0.31
SFXN2-213ENST00000602868 MCM10Q7L590 875 aa16.96■□□□□ 0.31
SFXN2-213ENST00000602868 ADAMTS7Q9UKP4 1686 aa16.96■□□□□ 0.31
SFXN2-213ENST00000602868 BTBD11A6QL63 1104 aa16.95■□□□□ 0.3
SFXN2-213ENST00000602868 TMPOP42166 694 aaKnown RBP16.95■□□□□ 0.3
SFXN2-213ENST00000602868 TTC5Q8N0Z6 440 aa16.95■□□□□ 0.3
SFXN2-213ENST00000602868 PNISRQ8TF01 805 aaKnown RBP16.95■□□□□ 0.3
SFXN2-213ENST00000602868 KDM2BQ8NHM5 1336 aa16.95■□□□□ 0.3
SFXN2-213ENST00000602868 ZC3H4Q9UPT8 1303 aaKnown RBP16.95■□□□□ 0.3
SFXN2-213ENST00000602868 CYP19A1P11511 503 aaPredicted RBP16.94■□□□□ 0.3
SFXN2-213ENST00000602868 RIPK4P57078 832 aa16.94■□□□□ 0.3
SFXN2-213ENST00000602868 DCTN1Q14203 1278 aa16.94■□□□□ 0.3
SFXN2-213ENST00000602868 INTS5Q6P9B9 1019 aaKnown RBP16.94■□□□□ 0.3
SFXN2-213ENST00000602868 C16orf71Q8IYS4 520 aaPredicted RBP16.94■□□□□ 0.3
SFXN2-213ENST00000602868 ZNF496Q96IT1 587 aaPredicted RBP16.94■□□□□ 0.3
SFXN2-213ENST00000602868 RBM46Q8TBY0 533 aaKnown RBP16.93■□□□□ 0.3
SFXN2-213ENST00000602868 FMNL2Q96PY5 1086 aa16.93■□□□□ 0.3
SFXN2-213ENST00000602868 BABAM1Q9NWV8 329 aa16.93■□□□□ 0.3
SFXN2-213ENST00000602868 WWC3Q9ULE0 1092 aa16.93■□□□□ 0.3
SFXN2-213ENST00000602868 STARD3NLO95772 234 aa16.92■□□□□ 0.3
SFXN2-213ENST00000602868 LMOD3Q0VAK6 560 aa16.92■□□□□ 0.3
SFXN2-213ENST00000602868 FSTL1Q12841 308 aa16.92■□□□□ 0.3
SFXN2-213ENST00000602868 DNAJC10Q8IXB1 793 aa16.92■□□□□ 0.3
SFXN2-213ENST00000602868 PDZRN3Q9UPQ7 1066 aa16.92■□□□□ 0.3
SFXN2-213ENST00000602868 KCNA3P22001 575 aa16.91■□□□□ 0.3
SFXN2-213ENST00000602868 TM4SF1P30408 202 aa16.91■□□□□ 0.3
SFXN2-213ENST00000602868 CCDC184Q52MB2 194 aa16.91■□□□□ 0.3
SFXN2-213ENST00000602868 HEG1Q9ULI3 1381 aa16.9■□□□□ 0.3
SFXN2-213ENST00000602868 CEP350Q5VT06 3117 aa16.9■□□□□ 0.3
SFXN2-213ENST00000602868 MYH14Q7Z406 1995 aaKnown RBP16.9■□□□□ 0.3
SFXN2-213ENST00000602868 KCNQ3O43525 872 aa16.9■□□□□ 0.3
SFXN2-213ENST00000602868 FKBP8Q14318 412 aa16.9■□□□□ 0.3
SFXN2-213ENST00000602868 NCBP3Q53F19 620 aaKnown RBP16.9■□□□□ 0.3
SFXN2-213ENST00000602868 C9orf131Q5VYM1 1079 aa16.9■□□□□ 0.3
SFXN2-213ENST00000602868 NARFQ9UHQ1 456 aa16.9■□□□□ 0.3
SFXN2-213ENST00000602868 KIAA1551Q9HCM1 1747 aa16.9■□□□□ 0.3
SFXN2-213ENST00000602868 N4BP2Q86UW6 1770 aaPredicted RBP16.89■□□□□ 0.3
SFXN2-213ENST00000602868 ARFGEF1Q9Y6D6 1849 aa16.89■□□□□ 0.29
SFXN2-213ENST00000602868 A0A087WZG4 1122 aa16.89■□□□□ 0.29
SFXN2-213ENST00000602868 POLRMTO00411 1230 aaKnown RBP16.89■□□□□ 0.29
SFXN2-213ENST00000602868 SNRPA1P09661 255 aaKnown RBP16.89■□□□□ 0.29
SFXN2-213ENST00000602868 SOS1Q07889 1333 aaPredicted RBP16.89■□□□□ 0.29
SFXN2-213ENST00000602868 SCN11AQ9UI33 1791 aa16.88■□□□□ 0.29
SFXN2-213ENST00000602868 CCDC146Q8IYE0 955 aa16.88■□□□□ 0.29
SFXN2-213ENST00000602868 TRIM35Q9UPQ4 493 aa16.88■□□□□ 0.29
SFXN2-213ENST00000602868 KCPQ6ZWJ8 1503 aa16.87■□□□□ 0.29
SFXN2-213ENST00000602868 BRCA1P38398 1863 aaKnown RBP16.87■□□□□ 0.29
SFXN2-213ENST00000602868 SRP68Q9UHB9 627 aaKnown RBP16.87■□□□□ 0.29
SFXN2-213ENST00000602868 EIF5P55010 431 aaKnown RBP16.86■□□□□ 0.29
SFXN2-213ENST00000602868 DDR1Q08345 913 aa16.86■□□□□ 0.29
SFXN2-213ENST00000602868 USPL1Q5W0Q7 1092 aa16.86■□□□□ 0.29
SFXN2-213ENST00000602868 CHL1O00533 1208 aa16.85■□□□□ 0.29
SFXN2-213ENST00000602868 APAF1O14727 1248 aa16.85■□□□□ 0.29
SFXN2-213ENST00000602868 EIF4A1P60842 406 aaKnown RBP16.85■□□□□ 0.29
SFXN2-213ENST00000602868 NPM2Q86SE8 214 aaKnown RBP16.85■□□□□ 0.29
SFXN2-213ENST00000602868 THUMPD2Q9BTF0 503 aaKnown RBP16.85■□□□□ 0.29
SFXN2-213ENST00000602868 MRS2Q9HD23 443 aa16.85■□□□□ 0.29
SFXN2-213ENST00000602868 MIS18AQ9NYP9 233 aa16.85■□□□□ 0.29
SFXN2-213ENST00000602868 RNF181Q9P0P0 153 aa16.85■□□□□ 0.29
SFXN2-213ENST00000602868 USP16Q9Y5T5 823 aa16.85■□□□□ 0.29
SFXN2-213ENST00000602868 COL15A1P39059 1388 aa16.85■□□□□ 0.29
SFXN2-213ENST00000602868 IL6STP40189 918 aaPredicted RBP16.84■□□□□ 0.29
SFXN2-213ENST00000602868 NMRK2Q9NPI5 230 aa16.84■□□□□ 0.29
SFXN2-213ENST00000602868 RRP7AQ9Y3A4 280 aaKnown RBP16.84■□□□□ 0.29
SFXN2-213ENST00000602868 TJP1Q07157 1748 aa16.84■□□□□ 0.29
SFXN2-213ENST00000602868 H0YIN7 160 aa16.83■□□□□ 0.28
SFXN2-213ENST00000602868 LMNB1P20700 586 aa16.83■□□□□ 0.28
SFXN2-213ENST00000602868 NEUROD2Q15784 382 aa16.83■□□□□ 0.28
SFXN2-213ENST00000602868 DNAJC5GQ8N7S2 189 aa16.83■□□□□ 0.28
SFXN2-213ENST00000602868 TTLL6Q8N841 843 aa16.83■□□□□ 0.28
SFXN2-213ENST00000602868 ZBTB1Q9Y2K1 713 aa16.83■□□□□ 0.28
SFXN2-213ENST00000602868 SERPINB2P05120 415 aa16.82■□□□□ 0.28
SFXN2-213ENST00000602868 NFIXQ14938 502 aa16.82■□□□□ 0.28
SFXN2-213ENST00000602868 CCDC27Q2M243 656 aa16.82■□□□□ 0.28
SFXN2-213ENST00000602868 SMC1BQ8NDV3 1235 aa16.82■□□□□ 0.28
SFXN2-213ENST00000602868 A1BGP04217 495 aa16.81■□□□□ 0.28
SFXN2-213ENST00000602868 CHRNA5P30532 468 aa16.81■□□□□ 0.28
SFXN2-213ENST00000602868 CFAP44Q96MT7 982 aa16.81■□□□□ 0.28
SFXN2-213ENST00000602868 ZNF853P0CG23 659 aa16.8■□□□□ 0.28
SFXN2-213ENST00000602868 VEGFAP15692 232 aaPredicted RBP16.8■□□□□ 0.28
SFXN2-213ENST00000602868 CANXP27824 592 aaKnown RBP16.8■□□□□ 0.28
SFXN2-213ENST00000602868 PDE6BP35913 854 aa16.8■□□□□ 0.28
SFXN2-213ENST00000602868 CALD1Q05682 793 aaKnown RBP16.8■□□□□ 0.28
SFXN2-213ENST00000602868 TSPYL4Q9UJ04 414 aa16.8■□□□□ 0.28
SFXN2-213ENST00000602868 PRAMEF22A3QJZ6 481 aa16.79■□□□□ 0.28
SFXN2-213ENST00000602868 GLTPD2A6NH11 291 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms