RNA–Protein interactions for RNA: ENST00000602165.1

GTPBP3-228, Transcript of GTP binding protein 3, mitochondrial, humanhuman

TSL 4

Gene GTPBP3, Length 617 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTPBP3-228ENST00000602165 NEFMP07197 916 aa24.31■■□□□ 1.48
GTPBP3-228ENST00000602165 FKBP8Q14318 412 aa24.31■■□□□ 1.48
GTPBP3-228ENST00000602165 C10orf71Q711Q0 1435 aa24.3■■□□□ 1.48
GTPBP3-228ENST00000602165 CANXP27824 592 aaKnown RBP24.3■■□□□ 1.48
GTPBP3-228ENST00000602165 FMNL2Q96PY5 1086 aa24.3■■□□□ 1.48
GTPBP3-228ENST00000602165 PLEKHF1Q96S99 279 aa24.3■■□□□ 1.48
GTPBP3-228ENST00000602165 PARP3Q9Y6F1 533 aa24.3■■□□□ 1.48
GTPBP3-228ENST00000602165 ZPR1O75312 459 aa24.29■■□□□ 1.48
GTPBP3-228ENST00000602165 STARD3NLO95772 234 aa24.29■■□□□ 1.48
GTPBP3-228ENST00000602165 USPL1Q5W0Q7 1092 aa24.29■■□□□ 1.48
GTPBP3-228ENST00000602165 PXDNLA1KZ92 1463 aa24.28■■□□□ 1.48
GTPBP3-228ENST00000602165 HTATSF1O43719 755 aaKnown RBP24.28■■□□□ 1.48
GTPBP3-228ENST00000602165 AFDNP55196 1824 aaKnown RBP24.28■■□□□ 1.48
GTPBP3-228ENST00000602165 GRIN3BO60391 1043 aa24.27■■□□□ 1.48
GTPBP3-228ENST00000602165 MYBBP1AQ9BQG0 1328 aaKnown RBP24.27■■□□□ 1.48
GTPBP3-228ENST00000602165 BRCA1P38398 1863 aaKnown RBP24.26■■□□□ 1.47
GTPBP3-228ENST00000602165 DDR1Q08345 913 aa24.26■■□□□ 1.47
GTPBP3-228ENST00000602165 TEX13AQ9BXU3 409 aaPredicted RBP24.26■■□□□ 1.47
GTPBP3-228ENST00000602165 NARFQ9UHQ1 456 aa24.26■■□□□ 1.47
GTPBP3-228ENST00000602165 SCN7AQ01118 1682 aa24.25■■□□□ 1.47
GTPBP3-228ENST00000602165 KDM3BQ7LBC6 1761 aa24.25■■□□□ 1.47
GTPBP3-228ENST00000602165 NFE2L2Q16236 605 aa24.24■■□□□ 1.47
GTPBP3-228ENST00000602165 ZNF784Q8NCA9 323 aaPredicted RBP24.24■■□□□ 1.47
GTPBP3-228ENST00000602165 MAPK8IP3Q9UPT6 1336 aa24.24■■□□□ 1.47
GTPBP3-228ENST00000602165 EIF5P55010 431 aaKnown RBP24.23■■□□□ 1.47
GTPBP3-228ENST00000602165 PNNQ9H307 717 aaKnown RBP24.23■■□□□ 1.47
GTPBP3-228ENST00000602165 ZNF330Q9Y3S2 320 aaPredicted RBP24.23■■□□□ 1.47
GTPBP3-228ENST00000602165 A0A0G2JLW4 131 aa24.22■■□□□ 1.47
GTPBP3-228ENST00000602165 PRAMEF22A3QJZ6 481 aa24.22■■□□□ 1.47
GTPBP3-228ENST00000602165 POLRMTO00411 1230 aaKnown RBP24.22■■□□□ 1.47
GTPBP3-228ENST00000602165 A1BGP04217 495 aa24.22■■□□□ 1.47
GTPBP3-228ENST00000602165 TM4SF1P30408 202 aa24.22■■□□□ 1.47
GTPBP3-228ENST00000602165 TGFB2P61812 414 aa24.22■■□□□ 1.47
GTPBP3-228ENST00000602165 BCL2L12Q9HB09 334 aa24.22■■□□□ 1.47
GTPBP3-228ENST00000602165 LAMB4A4D0S4 1761 aa24.21■■□□□ 1.47
GTPBP3-228ENST00000602165 NRXN2Q9P2S2 1712 aa24.21■■□□□ 1.47
GTPBP3-228ENST00000602165 TAF7Q15545 349 aaPredicted RBP24.21■■□□□ 1.47
GTPBP3-228ENST00000602165 MIS18AQ9NYP9 233 aa24.21■■□□□ 1.47
GTPBP3-228ENST00000602165 THUMPD2Q9BTF0 503 aaKnown RBP24.2■■□□□ 1.46
GTPBP3-228ENST00000602165 USP16Q9Y5T5 823 aa24.2■■□□□ 1.46
GTPBP3-228ENST00000602165 BCORQ6W2J9 1755 aa24.2■■□□□ 1.46
GTPBP3-228ENST00000602165 A0A087WZG4 1122 aa24.19■■□□□ 1.46
GTPBP3-228ENST00000602165 DPEP1P16444 411 aa24.19■■□□□ 1.46
GTPBP3-228ENST00000602165 ZEB1P37275 1124 aaPredicted RBP24.19■■□□□ 1.46
GTPBP3-228ENST00000602165 NFIXQ14938 502 aa24.19■■□□□ 1.46
GTPBP3-228ENST00000602165 SNRPA1P09661 255 aaKnown RBP24.18■■□□□ 1.46
GTPBP3-228ENST00000602165 IL6STP40189 918 aaPredicted RBP24.18■■□□□ 1.46
GTPBP3-228ENST00000602165 PIP4K2AP48426 406 aaPredicted RBP24.18■■□□□ 1.46
GTPBP3-228ENST00000602165 TBC1D2BQ9UPU7 963 aa24.17■■□□□ 1.46
GTPBP3-228ENST00000602165 ARFGEF1Q9Y6D6 1849 aa24.17■■□□□ 1.46
GTPBP3-228ENST00000602165 PRKRIP1Q9H875 184 aaPredicted RBP24.16■■□□□ 1.46
GTPBP3-228ENST00000602165 BCS1LQ9Y276 419 aa24.16■■□□□ 1.46
GTPBP3-228ENST00000602165 BICDL1Q6ZP65 573 aa24.15■■□□□ 1.46
GTPBP3-228ENST00000602165 NPM2Q86SE8 214 aaKnown RBP24.14■■□□□ 1.45
GTPBP3-228ENST00000602165 CCDC146Q8IYE0 955 aa24.14■■□□□ 1.45
GTPBP3-228ENST00000602165 SERPINB2P05120 415 aa24.13■■□□□ 1.45
GTPBP3-228ENST00000602165 KCNA3P22001 575 aa24.13■■□□□ 1.45
GTPBP3-228ENST00000602165 RIPK4P57078 832 aa24.13■■□□□ 1.45
GTPBP3-228ENST00000602165 PNISRQ8TF01 805 aaKnown RBP24.13■■□□□ 1.45
GTPBP3-228ENST00000602165 DLEC1Q9Y238 1755 aa24.13■■□□□ 1.45
GTPBP3-228ENST00000602165 CHRNA5P30532 468 aa24.12■■□□□ 1.45
GTPBP3-228ENST00000602165 WDR43Q15061 677 aaKnown RBP eCLIP24.12■■□□□ 1.45
GTPBP3-228ENST00000602165 TBC1D9BQ66K14 1250 aa24.12■■□□□ 1.45
GTPBP3-228ENST00000602165 ANKRD31Q8N7Z5 1873 aa24.11■■□□□ 1.45
GTPBP3-228ENST00000602165 TMPOP42166 694 aaKnown RBP24.11■■□□□ 1.45
GTPBP3-228ENST00000602165 DZIP3Q86Y13 1208 aaKnown RBP24.11■■□□□ 1.45
GTPBP3-228ENST00000602165 CAMTA2O94983 1202 aa24.1■■□□□ 1.45
GTPBP3-228ENST00000602165 RRP7AQ9Y3A4 280 aaKnown RBP24.1■■□□□ 1.45
GTPBP3-228ENST00000602165 CARMIL3Q8ND23 1372 aa24.09■■□□□ 1.45
GTPBP3-228ENST00000602165 NBPF26B4DH59 902 aa24.09■■□□□ 1.45
GTPBP3-228ENST00000602165 EIF4A1P60842 406 aaKnown RBP24.09■■□□□ 1.45
GTPBP3-228ENST00000602165 NBPF10Q6P3W6 841 aaKnown RBP24.09■■□□□ 1.45
GTPBP3-228ENST00000602165 NBPF15Q8N660 670 aa24.09■■□□□ 1.45
GTPBP3-228ENST00000602165 PIM2Q9P1W9 311 aa24.09■■□□□ 1.45
GTPBP3-228ENST00000602165 GIGYF1O75420 1035 aaPredicted RBP24.07■■□□□ 1.44
GTPBP3-228ENST00000602165 NEUROD2Q15784 382 aa24.07■■□□□ 1.44
GTPBP3-228ENST00000602165 RUNDC1Q96C34 613 aa24.07■■□□□ 1.44
GTPBP3-228ENST00000602165 ADAMTS8Q9UP79 889 aa24.07■■□□□ 1.44
GTPBP3-228ENST00000602165 ATP10DQ9P241 1426 aa24.07■■□□□ 1.44
GTPBP3-228ENST00000602165 ADCY9O60503 1353 aa24.06■■□□□ 1.44
GTPBP3-228ENST00000602165 LMOD3Q0VAK6 560 aa24.06■■□□□ 1.44
GTPBP3-228ENST00000602165 TSPYL4Q9UJ04 414 aa24.06■■□□□ 1.44
GTPBP3-228ENST00000602165 COL11A2P13942 1736 aaPredicted RBP24.05■■□□□ 1.44
GTPBP3-228ENST00000602165 DALRD3Q5D0E6 543 aaKnown RBP24.05■■□□□ 1.44
GTPBP3-228ENST00000602165 ARHGAP27Q6ZUM4 889 aa24.05■■□□□ 1.44
GTPBP3-228ENST00000602165 SETDB2Q96T68 719 aa24.04■■□□□ 1.44
GTPBP3-228ENST00000602165 NUP98P52948 1817 aa24.03■■□□□ 1.44
GTPBP3-228ENST00000602165 CACNA1SQ13698 1873 aa24.03■■□□□ 1.44
GTPBP3-228ENST00000602165 CCDC24Q8N4L8 307 aa24.03■■□□□ 1.44
GTPBP3-228ENST00000602165 PRR5LQ6MZQ0 368 aa24.02■■□□□ 1.44
GTPBP3-228ENST00000602165 SBF1O95248 1867 aa24.01■■□□□ 1.43
GTPBP3-228ENST00000602165 C2CD5Q86YS7 1000 aa24.01■■□□□ 1.43
GTPBP3-228ENST00000602165 NGEFQ8N5V2 710 aa24.01■■□□□ 1.43
GTPBP3-228ENST00000602165 ZNF652Q9Y2D9 606 aa24.01■■□□□ 1.43
GTPBP3-228ENST00000602165 CLEC4GQ6UXB4 293 aa24■■□□□ 1.43
GTPBP3-228ENST00000602165 TRIM35Q9UPQ4 493 aa24■■□□□ 1.43
GTPBP3-228ENST00000602165 NPHP1O15259 732 aa23.99■■□□□ 1.43
GTPBP3-228ENST00000602165 CNBD1Q8NA66 436 aa23.99■■□□□ 1.43
GTPBP3-228ENST00000602165 ZNF526Q8TF50 670 aaPredicted RBP23.99■■□□□ 1.43
GTPBP3-228ENST00000602165 ZNF316A6NFI3 1004 aaPredicted RBP23.98■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms