RNA–Protein interactions for RNA: ENST00000601656.5

FARP1-235, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 806 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-235ENST00000601656 CRYBG1Q9Y4K1 1723 aa13.19□□□□□ -0.3
FARP1-235ENST00000601656 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.18□□□□□ -0.3
FARP1-235ENST00000601656 C11orf95C9JLR9 678 aaPredicted RBP13.18□□□□□ -0.3
FARP1-235ENST00000601656 OATP04181 439 aa13.18□□□□□ -0.3
FARP1-235ENST00000601656 TUSC1Q2TAM9 212 aa13.18□□□□□ -0.3
FARP1-235ENST00000601656 METTL3Q86U44 580 aaKnown RBP13.18□□□□□ -0.3
FARP1-235ENST00000601656 TCP11L2Q8N4U5 519 aa13.18□□□□□ -0.3
FARP1-235ENST00000601656 PUS7Q96PZ0 661 aaKnown RBP13.18□□□□□ -0.3
FARP1-235ENST00000601656 PRAM1Q96QH2 718 aa13.17□□□□□ -0.3
FARP1-235ENST00000601656 TBC1D2BQ9UPU7 963 aa13.17□□□□□ -0.3
FARP1-235ENST00000601656 ANKARQ7Z5J8 1434 aa13.16□□□□□ -0.3
FARP1-235ENST00000601656 MMRN1Q13201 1228 aa13.16□□□□□ -0.3
FARP1-235ENST00000601656 GPR162Q16538 588 aa13.16□□□□□ -0.3
FARP1-235ENST00000601656 CFAP70Q5T0N1 1121 aa13.16□□□□□ -0.3
FARP1-235ENST00000601656 GPR153Q6NV75 609 aa13.16□□□□□ -0.3
FARP1-235ENST00000601656 LARP1Q6PKG0 1096 aaKnown RBP13.16□□□□□ -0.3
FARP1-235ENST00000601656 NGDNQ8NEJ9 315 aaKnown RBP13.16□□□□□ -0.3
FARP1-235ENST00000601656 LIMD1Q9UGP4 676 aa13.16□□□□□ -0.3
FARP1-235ENST00000601656 SBF2Q86WG5 1849 aa13.16□□□□□ -0.3
FARP1-235ENST00000601656 KRTAP3-3Q9BYR6 98 aa13.15□□□□□ -0.3
FARP1-235ENST00000601656 KRTAP3-2Q9BYR7 98 aa13.15□□□□□ -0.3
FARP1-235ENST00000601656 POGKQ9P215 609 aa13.15□□□□□ -0.3
FARP1-235ENST00000601656 ANKRD30BQ9BXX2 1392 aa13.15□□□□□ -0.3
FARP1-235ENST00000601656 RGPD3A6NKT7 1758 aaPredicted RBP13.15□□□□□ -0.31
FARP1-235ENST00000601656 RGPD4Q7Z3J3 1758 aa13.15□□□□□ -0.31
FARP1-235ENST00000601656 SSH2Q76I76 1423 aa13.14□□□□□ -0.31
FARP1-235ENST00000601656 DLC1Q96QB1 1528 aa13.14□□□□□ -0.31
FARP1-235ENST00000601656 HDGFL1Q5TGJ6 251 aa13.14□□□□□ -0.31
FARP1-235ENST00000601656 RIC3Q7Z5B4 369 aa13.14□□□□□ -0.31
FARP1-235ENST00000601656 EPAS1Q99814 870 aa13.14□□□□□ -0.31
FARP1-235ENST00000601656 MTFR1LQ9H019 292 aa13.14□□□□□ -0.31
FARP1-235ENST00000601656 STK32BQ9NY57 414 aa13.14□□□□□ -0.31
FARP1-235ENST00000601656 DHX57Q6P158 1386 aaKnown RBP13.14□□□□□ -0.31
FARP1-235ENST00000601656 RFX1P22670 979 aa13.13□□□□□ -0.31
FARP1-235ENST00000601656 PTF1AQ7RTS3 328 aa13.13□□□□□ -0.31
FARP1-235ENST00000601656 C14orf93Q9H972 538 aaKnown RBP13.13□□□□□ -0.31
FARP1-235ENST00000601656 THRAP3Q9Y2W1 955 aaKnown RBP13.13□□□□□ -0.31
FARP1-235ENST00000601656 CDK11BP21127 795 aaKnown RBP13.12□□□□□ -0.31
FARP1-235ENST00000601656 SLC15A2Q16348 729 aa13.12□□□□□ -0.31
FARP1-235ENST00000601656 NUTM2GQ5VZR2 741 aa13.12□□□□□ -0.31
FARP1-235ENST00000601656 HIRIP3Q9BW71 556 aaPredicted RBP13.12□□□□□ -0.31
FARP1-235ENST00000601656 PIK3C2GO75747 1445 aa13.12□□□□□ -0.31
FARP1-235ENST00000601656 PARP4Q9UKK3 1724 aaKnown RBP13.11□□□□□ -0.31
FARP1-235ENST00000601656 VARS2Q5ST30 1063 aaKnown RBP13.11□□□□□ -0.31
FARP1-235ENST00000601656 OVOS2A0A0G2JMS6 1433 aa13.11□□□□□ -0.31
FARP1-235ENST00000601656 OVOS2A0A0J9YW53 1432 aa13.11□□□□□ -0.31
FARP1-235ENST00000601656 OVOS2Q6IE36 1432 aa13.11□□□□□ -0.31
FARP1-235ENST00000601656 PRR36Q9H6K5 1346 aa13.11□□□□□ -0.31
FARP1-235ENST00000601656 PHRF1Q9P1Y6 1649 aaKnown RBP13.1□□□□□ -0.31
FARP1-235ENST00000601656 MAP3K7O43318 606 aa13.1□□□□□ -0.31
FARP1-235ENST00000601656 PXYLP1Q8TE99 480 aa13.1□□□□□ -0.31
FARP1-235ENST00000601656 VRTNQ9H8Y1 702 aa13.1□□□□□ -0.31
FARP1-235ENST00000601656 PEAK1Q9H792 1746 aa13.1□□□□□ -0.31
FARP1-235ENST00000601656 PHF14O94880 888 aa13.09□□□□□ -0.31
FARP1-235ENST00000601656 TXNRD1Q16881 649 aa13.09□□□□□ -0.31
FARP1-235ENST00000601656 ADAMTS19Q8TE59 1207 aa13.09□□□□□ -0.31
FARP1-235ENST00000601656 NLRP7Q8WX94 980 aa13.09□□□□□ -0.31
FARP1-235ENST00000601656 SPATA31E1Q6ZUB1 1445 aa13.08□□□□□ -0.32
FARP1-235ENST00000601656 ARSIQ5FYB1 569 aa13.08□□□□□ -0.32
FARP1-235ENST00000601656 PPP1R12CQ9BZL4 782 aa13.08□□□□□ -0.32
FARP1-235ENST00000601656 SHANK3Q9BYB0 1731 aa13.08□□□□□ -0.32
FARP1-235ENST00000601656 MAP3K5Q99683 1374 aa13.07□□□□□ -0.32
FARP1-235ENST00000601656 SPTLC1O15269 473 aa13.07□□□□□ -0.32
FARP1-235ENST00000601656 DDB1Q16531 1140 aa13.07□□□□□ -0.32
FARP1-235ENST00000601656 WASHC4Q2M389 1173 aa13.07□□□□□ -0.32
FARP1-235ENST00000601656 ZNF687Q8N1G0 1237 aa13.07□□□□□ -0.32
FARP1-235ENST00000601656 EIF3AQ14152 1382 aaKnown RBP13.07□□□□□ -0.32
FARP1-235ENST00000601656 GOLGB1Q14789 3259 aaKnown RBP13.06□□□□□ -0.32
FARP1-235ENST00000601656 WASLO00401 505 aaPredicted RBP13.06□□□□□ -0.32
FARP1-235ENST00000601656 HSPA6P17066 643 aa13.06□□□□□ -0.32
FARP1-235ENST00000601656 FAM161AQ3B820 660 aa13.06□□□□□ -0.32
FARP1-235ENST00000601656 IGSF5Q9NSI5 407 aa13.06□□□□□ -0.32
FARP1-235ENST00000601656 GNEQ9Y223 722 aaKnown RBP13.06□□□□□ -0.32
FARP1-235ENST00000601656 RBM47A0AV96 593 aaKnown RBP13.05□□□□□ -0.32
FARP1-235ENST00000601656 CARNS1A5YM72 827 aa13.05□□□□□ -0.32
FARP1-235ENST00000601656 UNCXA6NJT0 531 aa13.05□□□□□ -0.32
FARP1-235ENST00000601656 SLC34A2O95436 690 aa13.05□□□□□ -0.32
FARP1-235ENST00000601656 SPIRE2Q8WWL2 714 aa13.05□□□□□ -0.32
FARP1-235ENST00000601656 ADGRG1Q9Y653 693 aa13.05□□□□□ -0.32
FARP1-235ENST00000601656 ATP7BP35670 1465 aa13.04□□□□□ -0.32
FARP1-235ENST00000601656 TULP4Q9NRJ4 1543 aa13.04□□□□□ -0.32
FARP1-235ENST00000601656 TRAK1Q9UPV9 953 aa13.04□□□□□ -0.32
FARP1-235ENST00000601656 NDUFB9Q9Y6M9 179 aa13.04□□□□□ -0.32
FARP1-235ENST00000601656 LMO7Q8WWI1 1683 aa13.03□□□□□ -0.32
FARP1-235ENST00000601656 AP1G2O75843 785 aa13.03□□□□□ -0.32
FARP1-235ENST00000601656 ABTB2Q8N961 1025 aa13.03□□□□□ -0.32
FARP1-235ENST00000601656 MARCH10Q8NA82 808 aaPredicted RBP13.03□□□□□ -0.32
FARP1-235ENST00000601656 CRB1P82279 1406 aa13.03□□□□□ -0.32
FARP1-235ENST00000601656 TMEM88BA6NKF7 163 aa13.02□□□□□ -0.33
FARP1-235ENST00000601656 GJA5P36382 358 aa13.02□□□□□ -0.33
FARP1-235ENST00000601656 RSBN1LQ6PCB5 846 aaPredicted RBP13.02□□□□□ -0.33
FARP1-235ENST00000601656 NUDT16Q96DE0 195 aaKnown RBP13.02□□□□□ -0.33
FARP1-235ENST00000601656 CPDO75976 1380 aa13.02□□□□□ -0.33
FARP1-235ENST00000601656 ATG7O95352 703 aa13.01□□□□□ -0.33
FARP1-235ENST00000601656 USP17L8P0C7I0 530 aa13.01□□□□□ -0.33
FARP1-235ENST00000601656 TSR1Q2NL82 804 aaKnown RBP13.01□□□□□ -0.33
FARP1-235ENST00000601656 PTCD2Q8WV60 388 aaKnown RBP13.01□□□□□ -0.33
FARP1-235ENST00000601656 COL5A2P05997 1499 aaPredicted RBP13.01□□□□□ -0.33
FARP1-235ENST00000601656 LRRC37A3O60309 1634 aa13.01□□□□□ -0.33
FARP1-235ENST00000601656 AKAP12Q02952 1782 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms