RNA–Protein interactions for RNA: ENST00000601549.1

KCNN4-208, Transcript of potassium calcium-activated channel subfamily N member 4, humanhuman

TSL 3

Gene KCNN4, Length 1,093 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNN4-208ENST00000601549 PDE3AQ14432 1141 aa23.17■■□□□ 1.3
KCNN4-208ENST00000601549 DDX21Q9NR30 783 aaKnown RBP eCLIP23.17■■□□□ 1.3
KCNN4-208ENST00000601549 BCAR3O75815 825 aa23.16■■□□□ 1.3
KCNN4-208ENST00000601549 NEFLP07196 543 aa23.16■■□□□ 1.3
KCNN4-208ENST00000601549 ZKSCAN2Q63HK3 967 aa23.16■■□□□ 1.3
KCNN4-208ENST00000601549 RBM42Q9BTD8 480 aaKnown RBP23.16■■□□□ 1.3
KCNN4-208ENST00000601549 LAMB4A4D0S4 1761 aa23.15■■□□□ 1.3
KCNN4-208ENST00000601549 CACNA1FO60840 1977 aa23.15■■□□□ 1.3
KCNN4-208ENST00000601549 SLC4A2P04920 1241 aa23.15■■□□□ 1.3
KCNN4-208ENST00000601549 API5Q9BZZ5 524 aaKnown RBP23.15■■□□□ 1.3
KCNN4-208ENST00000601549 EIF2S2P20042 333 aaKnown RBP23.14■■□□□ 1.29
KCNN4-208ENST00000601549 CANXP27824 592 aaKnown RBP23.14■■□□□ 1.29
KCNN4-208ENST00000601549 PLSCR1O15162 318 aa23.13■■□□□ 1.29
KCNN4-208ENST00000601549 SLC27A3Q5K4L6 730 aa23.13■■□□□ 1.29
KCNN4-208ENST00000601549 USP16Q9Y5T5 823 aa23.13■■□□□ 1.29
KCNN4-208ENST00000601549 BTAF1O14981 1849 aa23.12■■□□□ 1.29
KCNN4-208ENST00000601549 ERICH6BQ5W0A0 696 aa23.12■■□□□ 1.29
KCNN4-208ENST00000601549 ATF7IPQ6VMQ6 1270 aa23.12■■□□□ 1.29
KCNN4-208ENST00000601549 ATP6V1AP38606 617 aa23.11■■□□□ 1.29
KCNN4-208ENST00000601549 DEFB132Q7Z7B7 95 aa23.11■■□□□ 1.29
KCNN4-208ENST00000601549 KAT6BQ8WYB5 2073 aa23.11■■□□□ 1.29
KCNN4-208ENST00000601549 CYP19A1P11511 503 aaPredicted RBP23.1■■□□□ 1.29
KCNN4-208ENST00000601549 EN1Q05925 392 aaPredicted RBP23.1■■□□□ 1.29
KCNN4-208ENST00000601549 BCL2L13Q9BXK5 485 aa23.1■■□□□ 1.29
KCNN4-208ENST00000601549 CHPF2Q9P2E5 772 aa23.1■■□□□ 1.29
KCNN4-208ENST00000601549 NOB1Q9ULX3 412 aaKnown RBP23.1■■□□□ 1.29
KCNN4-208ENST00000601549 DDX58O95786 925 aaKnown RBP23.09■■□□□ 1.29
KCNN4-208ENST00000601549 FLIIQ13045 1269 aa23.09■■□□□ 1.29
KCNN4-208ENST00000601549 DNAJC10Q8IXB1 793 aa23.09■■□□□ 1.29
KCNN4-208ENST00000601549 FRAT1Q92837 279 aaPredicted RBP23.09■■□□□ 1.29
KCNN4-208ENST00000601549 SLC4A9Q96Q91 983 aa23.09■■□□□ 1.29
KCNN4-208ENST00000601549 C5P01031 1676 aa23.09■■□□□ 1.29
KCNN4-208ENST00000601549 RGPD3A6NKT7 1758 aaPredicted RBP23.09■■□□□ 1.29
KCNN4-208ENST00000601549 RGPD4Q7Z3J3 1758 aa23.09■■□□□ 1.29
KCNN4-208ENST00000601549 PRAMEF22A3QJZ6 481 aa23.08■■□□□ 1.29
KCNN4-208ENST00000601549 AAMPQ13685 434 aa23.08■■□□□ 1.29
KCNN4-208ENST00000601549 PDIA6Q15084 440 aa23.08■■□□□ 1.29
KCNN4-208ENST00000601549 RC3H1Q5TC82 1133 aaKnown RBP23.08■■□□□ 1.29
KCNN4-208ENST00000601549 PTF1AQ7RTS3 328 aa23.08■■□□□ 1.29
KCNN4-208ENST00000601549 CHMP4BQ9H444 224 aaKnown RBP23.07■■□□□ 1.28
KCNN4-208ENST00000601549 CNTNAP4Q9C0A0 1308 aa23.07■■□□□ 1.28
KCNN4-208ENST00000601549 LY75O60449 1722 aa23.06■■□□□ 1.28
KCNN4-208ENST00000601549 IL6STP40189 918 aaPredicted RBP23.06■■□□□ 1.28
KCNN4-208ENST00000601549 FTSJ3Q8IY81 847 aaKnown RBP23.06■■□□□ 1.28
KCNN4-208ENST00000601549 DZIP1LQ8IYY4 767 aaKnown RBP23.06■■□□□ 1.28
KCNN4-208ENST00000601549 CAMKK2Q96RR4 588 aa23.06■■□□□ 1.28
KCNN4-208ENST00000601549 CCNL1Q9UK58 526 aaPredicted RBP23.06■■□□□ 1.28
KCNN4-208ENST00000601549 TRIM27P14373 513 aa23.05■■□□□ 1.28
KCNN4-208ENST00000601549 CCDC87Q9NVE4 849 aa23.05■■□□□ 1.28
KCNN4-208ENST00000601549 TJP1Q07157 1748 aa23.05■■□□□ 1.28
KCNN4-208ENST00000601549 EZH2Q15910 746 aaKnown RBP23.04■■□□□ 1.28
KCNN4-208ENST00000601549 NPM2Q86SE8 214 aaKnown RBP23.04■■□□□ 1.28
KCNN4-208ENST00000601549 NECTIN2Q92692 538 aa23.04■■□□□ 1.28
KCNN4-208ENST00000601549 IBTKQ9P2D0 1353 aaPredicted RBP23.03■■□□□ 1.28
KCNN4-208ENST00000601549 TCERG1O14776 1098 aaKnown RBP23.03■■□□□ 1.28
KCNN4-208ENST00000601549 RGL2O15211 777 aa23.03■■□□□ 1.28
KCNN4-208ENST00000601549 FKBP5Q13451 457 aaPredicted RBP23.03■■□□□ 1.28
KCNN4-208ENST00000601549 LRP10Q7Z4F1 713 aa23.03■■□□□ 1.28
KCNN4-208ENST00000601549 PXDNLA1KZ92 1463 aa23.03■■□□□ 1.28
KCNN4-208ENST00000601549 ABCC4O15439 1325 aa23.03■■□□□ 1.28
KCNN4-208ENST00000601549 ITPK1Q13572 414 aa23.02■■□□□ 1.28
KCNN4-208ENST00000601549 RREB1Q92766 1687 aa23.01■■□□□ 1.27
KCNN4-208ENST00000601549 NBPF26B4DH59 902 aa23.01■■□□□ 1.27
KCNN4-208ENST00000601549 A1BGP04217 495 aa23.01■■□□□ 1.27
KCNN4-208ENST00000601549 CRKLP46109 303 aaKnown RBP23.01■■□□□ 1.27
KCNN4-208ENST00000601549 CCT4P50991 539 aaKnown RBP23.01■■□□□ 1.27
KCNN4-208ENST00000601549 NBPF14Q5TI25 921 aa23.01■■□□□ 1.27
KCNN4-208ENST00000601549 NBPF10Q6P3W6 841 aaKnown RBP23.01■■□□□ 1.27
KCNN4-208ENST00000601549 KSR2Q6VAB6 950 aa23.01■■□□□ 1.27
KCNN4-208ENST00000601549 NBPF15Q8N660 670 aa23.01■■□□□ 1.27
KCNN4-208ENST00000601549 A0A087WZG4 1122 aa23■■□□□ 1.27
KCNN4-208ENST00000601549 PLIN1O60240 522 aa23■■□□□ 1.27
KCNN4-208ENST00000601549 TXNRD1Q16881 649 aa23■■□□□ 1.27
KCNN4-208ENST00000601549 G2E3Q7L622 706 aa23■■□□□ 1.27
KCNN4-208ENST00000601549 MYL6BP14649 208 aa22.99■■□□□ 1.27
KCNN4-208ENST00000601549 PROSER3Q2NL68 480 aa22.99■■□□□ 1.27
KCNN4-208ENST00000601549 INTS3Q68E01 1043 aaKnown RBP22.99■■□□□ 1.27
KCNN4-208ENST00000601549 INTS5Q6P9B9 1019 aaKnown RBP22.99■■□□□ 1.27
KCNN4-208ENST00000601549 PHAXQ9H814 394 aaKnown RBP22.99■■□□□ 1.27
KCNN4-208ENST00000601549 COL5A3P25940 1745 aaPredicted RBP22.99■■□□□ 1.27
KCNN4-208ENST00000601549 EIF5P55010 431 aaKnown RBP22.98■■□□□ 1.27
KCNN4-208ENST00000601549 ANKRD13DQ6ZTN6 518 aa22.98■■□□□ 1.27
KCNN4-208ENST00000601549 COPS6Q7L5N1 327 aa22.98■■□□□ 1.27
KCNN4-208ENST00000601549 PLBD2Q8NHP8 589 aa22.98■■□□□ 1.27
KCNN4-208ENST00000601549 XAGE3Q8WTP9 111 aa22.98■■□□□ 1.27
KCNN4-208ENST00000601549 DDX19BQ9UMR2 479 aa22.98■■□□□ 1.27
KCNN4-208ENST00000601549 LINC00116Q8NCU8 138 aa22.97■■□□□ 1.27
KCNN4-208ENST00000601549 DNAAF4Q8WXU2 420 aa22.97■■□□□ 1.27
KCNN4-208ENST00000601549 ATP10DQ9P241 1426 aa22.97■■□□□ 1.27
KCNN4-208ENST00000601549 ERVV-1B6SEH8 477 aa22.96■■□□□ 1.27
KCNN4-208ENST00000601549 RPS6KA4O75676 772 aa22.96■■□□□ 1.27
KCNN4-208ENST00000601549 ADRA2BP18089 450 aa22.96■■□□□ 1.27
KCNN4-208ENST00000601549 MVPQ14764 893 aaKnown RBP22.96■■□□□ 1.27
KCNN4-208ENST00000601549 KIF6Q6ZMV9 814 aa22.96■■□□□ 1.27
KCNN4-208ENST00000601549 ZBTB1Q9Y2K1 713 aa22.96■■□□□ 1.27
KCNN4-208ENST00000601549 PI4KAP2A4QPH2 592 aa22.95■■□□□ 1.26
KCNN4-208ENST00000601549 NEXNQ0ZGT2 675 aa22.95■■□□□ 1.26
KCNN4-208ENST00000601549 PI4KAP1Q8N8J0 262 aa22.95■■□□□ 1.26
KCNN4-208ENST00000601549 ANXA1P04083 346 aa22.94■■□□□ 1.26
KCNN4-208ENST00000601549 RIC3Q7Z5B4 369 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms