RNA–Protein interactions for RNA: ENST00000601545.5

SNRPA-211, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 5

Gene SNRPA, Length 695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-211ENST00000601545 PLEKHF1Q96S99 279 aa27.96■■■□□ 2.07
SNRPA-211ENST00000601545 PNNQ9H307 717 aaKnown RBP27.95■■■□□ 2.06
SNRPA-211ENST00000601545 NARFQ9UHQ1 456 aa27.94■■■□□ 2.06
SNRPA-211ENST00000601545 A0A0G2JLW4 131 aa27.93■■■□□ 2.06
SNRPA-211ENST00000601545 ZNF330Q9Y3S2 320 aaPredicted RBP27.93■■■□□ 2.06
SNRPA-211ENST00000601545 COL15A1P39059 1388 aa27.92■■■□□ 2.06
SNRPA-211ENST00000601545 A1BGP04217 495 aa27.92■■■□□ 2.06
SNRPA-211ENST00000601545 DDR1Q08345 913 aa27.92■■■□□ 2.06
SNRPA-211ENST00000601545 TAF7Q15545 349 aaPredicted RBP27.92■■■□□ 2.06
SNRPA-211ENST00000601545 MIS18AQ9NYP9 233 aa27.92■■■□□ 2.06
SNRPA-211ENST00000601545 MAPK8IP3Q9UPT6 1336 aa27.92■■■□□ 2.06
SNRPA-211ENST00000601545 TM4SF1P30408 202 aa27.91■■■□□ 2.06
SNRPA-211ENST00000601545 ZEB1P37275 1124 aaPredicted RBP27.91■■■□□ 2.06
SNRPA-211ENST00000601545 EIF5P55010 431 aaKnown RBP27.91■■■□□ 2.06
SNRPA-211ENST00000601545 TGFB2P61812 414 aa27.91■■■□□ 2.06
SNRPA-211ENST00000601545 NFE2L2Q16236 605 aa27.91■■■□□ 2.06
SNRPA-211ENST00000601545 ZNF784Q8NCA9 323 aaPredicted RBP27.91■■■□□ 2.06
SNRPA-211ENST00000601545 CICQ96RK0 1608 aaPredicted RBP27.91■■■□□ 2.06
SNRPA-211ENST00000601545 GOLGB1Q14789 3259 aaKnown RBP27.91■■■□□ 2.06
SNRPA-211ENST00000601545 MYBBP1AQ9BQG0 1328 aaKnown RBP27.91■■■□□ 2.06
SNRPA-211ENST00000601545 USP16Q9Y5T5 823 aa27.9■■■□□ 2.06
SNRPA-211ENST00000601545 A0A087WZG4 1122 aa27.89■■■□□ 2.06
SNRPA-211ENST00000601545 PRAMEF22A3QJZ6 481 aa27.88■■■□□ 2.05
SNRPA-211ENST00000601545 DPEP1P16444 411 aa27.88■■■□□ 2.05
SNRPA-211ENST00000601545 NPM2Q86SE8 214 aaKnown RBP27.88■■■□□ 2.05
SNRPA-211ENST00000601545 BCL2L12Q9HB09 334 aa27.88■■■□□ 2.05
SNRPA-211ENST00000601545 C4AP0C0L4 1744 aa27.87■■■□□ 2.05
SNRPA-211ENST00000601545 POLRMTO00411 1230 aaKnown RBP27.87■■■□□ 2.05
SNRPA-211ENST00000601545 SNRPA1P09661 255 aaKnown RBP27.87■■■□□ 2.05
SNRPA-211ENST00000601545 NFIXQ14938 502 aa27.87■■■□□ 2.05
SNRPA-211ENST00000601545 THUMPD2Q9BTF0 503 aaKnown RBP27.87■■■□□ 2.05
SNRPA-211ENST00000601545 TBC1D2BQ9UPU7 963 aa27.87■■■□□ 2.05
SNRPA-211ENST00000601545 UBR2Q8IWV8 1755 aa27.86■■■□□ 2.05
SNRPA-211ENST00000601545 IL6STP40189 918 aaPredicted RBP27.86■■■□□ 2.05
SNRPA-211ENST00000601545 PIP4K2AP48426 406 aaPredicted RBP27.85■■■□□ 2.05
SNRPA-211ENST00000601545 BICDL1Q6ZP65 573 aa27.85■■■□□ 2.05
SNRPA-211ENST00000601545 SIPA1L3O60292 1781 aaPredicted RBP27.85■■■□□ 2.05
SNRPA-211ENST00000601545 C10orf71Q711Q0 1435 aa27.84■■■□□ 2.05
SNRPA-211ENST00000601545 BCS1LQ9Y276 419 aa27.84■■■□□ 2.05
SNRPA-211ENST00000601545 PXDNLA1KZ92 1463 aa27.83■■■□□ 2.05
SNRPA-211ENST00000601545 SERPINB2P05120 415 aa27.82■■■□□ 2.04
SNRPA-211ENST00000601545 RIPK4P57078 832 aa27.82■■■□□ 2.04
SNRPA-211ENST00000601545 PNISRQ8TF01 805 aaKnown RBP27.82■■■□□ 2.04
SNRPA-211ENST00000601545 PRKRIP1Q9H875 184 aaPredicted RBP27.82■■■□□ 2.04
SNRPA-211ENST00000601545 CHD4Q14839 1912 aa27.81■■■□□ 2.04
SNRPA-211ENST00000601545 CCDC146Q8IYE0 955 aa27.81■■■□□ 2.04
SNRPA-211ENST00000601545 KCNA3P22001 575 aa27.8■■■□□ 2.04
SNRPA-211ENST00000601545 WDR43Q15061 677 aaKnown RBP eCLIP27.8■■■□□ 2.04
SNRPA-211ENST00000601545 CHRNA5P30532 468 aa27.79■■■□□ 2.04
SNRPA-211ENST00000601545 NEUROD2Q15784 382 aa27.78■■■□□ 2.04
SNRPA-211ENST00000601545 TBC1D9BQ66K14 1250 aa27.78■■■□□ 2.04
SNRPA-211ENST00000601545 PIM2Q9P1W9 311 aa27.78■■■□□ 2.04
SNRPA-211ENST00000601545 RRP7AQ9Y3A4 280 aaKnown RBP27.78■■■□□ 2.04
SNRPA-211ENST00000601545 TMPOP42166 694 aaKnown RBP27.77■■■□□ 2.04
SNRPA-211ENST00000601545 DZIP3Q86Y13 1208 aaKnown RBP27.77■■■□□ 2.04
SNRPA-211ENST00000601545 ARHGAP27Q6ZUM4 889 aa27.76■■■□□ 2.03
SNRPA-211ENST00000601545 ADAMTS8Q9UP79 889 aa27.76■■■□□ 2.03
SNRPA-211ENST00000601545 CAMTA2O94983 1202 aa27.75■■■□□ 2.03
SNRPA-211ENST00000601545 EIF4A1P60842 406 aaKnown RBP27.75■■■□□ 2.03
SNRPA-211ENST00000601545 NBPF26B4DH59 902 aa27.74■■■□□ 2.03
SNRPA-211ENST00000601545 NBPF10Q6P3W6 841 aaKnown RBP27.74■■■□□ 2.03
SNRPA-211ENST00000601545 NBPF15Q8N660 670 aa27.74■■■□□ 2.03
SNRPA-211ENST00000601545 N4BP2Q86UW6 1770 aaPredicted RBP27.73■■■□□ 2.03
SNRPA-211ENST00000601545 GIGYF1O75420 1035 aaPredicted RBP27.73■■■□□ 2.03
SNRPA-211ENST00000601545 DALRD3Q5D0E6 543 aaKnown RBP27.73■■■□□ 2.03
SNRPA-211ENST00000601545 RUNDC1Q96C34 613 aa27.73■■■□□ 2.03
SNRPA-211ENST00000601545 KIF13BQ9NQT8 1826 aa27.72■■■□□ 2.03
SNRPA-211ENST00000601545 TSPYL4Q9UJ04 414 aa27.72■■■□□ 2.03
SNRPA-211ENST00000601545 LMOD3Q0VAK6 560 aa27.71■■■□□ 2.03
SNRPA-211ENST00000601545 CCDC24Q8N4L8 307 aa27.71■■■□□ 2.03
SNRPA-211ENST00000601545 NGEFQ8N5V2 710 aa27.71■■■□□ 2.03
SNRPA-211ENST00000601545 SETDB2Q96T68 719 aa27.71■■■□□ 2.03
SNRPA-211ENST00000601545 DLG5Q8TDM6 1919 aa27.7■■■□□ 2.02
SNRPA-211ENST00000601545 KIAA1551Q9HCM1 1747 aa27.68■■■□□ 2.02
SNRPA-211ENST00000601545 NPHP1O15259 732 aa27.68■■■□□ 2.02
SNRPA-211ENST00000601545 C2CD5Q86YS7 1000 aa27.68■■■□□ 2.02
SNRPA-211ENST00000601545 H0YIN7 160 aa27.66■■■□□ 2.02
SNRPA-211ENST00000601545 ZNF526Q8TF50 670 aaPredicted RBP27.66■■■□□ 2.02
SNRPA-211ENST00000601545 ZNF316A6NFI3 1004 aaPredicted RBP27.65■■■□□ 2.02
SNRPA-211ENST00000601545 PRR5LQ6MZQ0 368 aa27.65■■■□□ 2.02
SNRPA-211ENST00000601545 CLEC4GQ6UXB4 293 aa27.65■■■□□ 2.02
SNRPA-211ENST00000601545 ZNF652Q9Y2D9 606 aa27.65■■■□□ 2.02
SNRPA-211ENST00000601545 ATP10DQ9P241 1426 aa27.65■■■□□ 2.02
SNRPA-211ENST00000601545 CARMIL3Q8ND23 1372 aa27.64■■■□□ 2.02
SNRPA-211ENST00000601545 MYL6BP14649 208 aa27.64■■■□□ 2.02
SNRPA-211ENST00000601545 LAS1LQ9Y4W2 734 aaKnown RBP27.64■■■□□ 2.02
SNRPA-211ENST00000601545 TRIM35Q9UPQ4 493 aa27.63■■■□□ 2.01
SNRPA-211ENST00000601545 EIF2S2P20042 333 aaKnown RBP27.62■■■□□ 2.01
SNRPA-211ENST00000601545 CNBD1Q8NA66 436 aa27.62■■■□□ 2.01
SNRPA-211ENST00000601545 BRIP1Q9BX63 1249 aa27.62■■■□□ 2.01
SNRPA-211ENST00000601545 BABAM1Q9NWV8 329 aa27.62■■■□□ 2.01
SNRPA-211ENST00000601545 PDE6BP35913 854 aa27.61■■■□□ 2.01
SNRPA-211ENST00000601545 HLFQ16534 295 aa27.61■■■□□ 2.01
SNRPA-211ENST00000601545 TTLL6Q8N841 843 aa27.61■■■□□ 2.01
SNRPA-211ENST00000601545 ZNF622Q969S3 477 aaKnown RBP eCLIP27.61■■■□□ 2.017e-14■■□□□ 13.7
SNRPA-211ENST00000601545 GPBP1L1Q9HC44 474 aaPredicted RBP27.61■■■□□ 2.01
SNRPA-211ENST00000601545 NIP7Q9Y221 180 aaKnown RBP eCLIP27.61■■■□□ 2.01
SNRPA-211ENST00000601545 AFDNP55196 1824 aaKnown RBP27.61■■■□□ 2.01
SNRPA-211ENST00000601545 FAM177BA6PVY3 158 aa27.6■■■□□ 2.01
SNRPA-211ENST00000601545 ST5P78524 1137 aa27.6■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms