RNA–Protein interactions for RNA: ENST00000600927.1

ZNF548-211, Transcript of zinc finger protein 548, humanhuman

TSL 3

Gene ZNF548, Length 616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-211ENST00000600927 GNPATO15228 680 aa14.92□□□□□ -0.02
ZNF548-211ENST00000600927 TEFQ10587 303 aa14.92□□□□□ -0.02
ZNF548-211ENST00000600927 TRIM35Q9UPQ4 493 aa14.92□□□□□ -0.02
ZNF548-211ENST00000600927 ZNF790Q6PG37 636 aa14.91□□□□□ -0.02
ZNF548-211ENST00000600927 SMIM5Q71RC9 77 aa14.91□□□□□ -0.02
ZNF548-211ENST00000600927 RPS6KA4O75676 772 aa14.9□□□□□ -0.02
ZNF548-211ENST00000600927 ADRA2BP18089 450 aa14.9□□□□□ -0.02
ZNF548-211ENST00000600927 CRKLP46109 303 aaKnown RBP14.9□□□□□ -0.02
ZNF548-211ENST00000600927 NEUROD2Q15784 382 aa14.9□□□□□ -0.02
ZNF548-211ENST00000600927 MCM10Q7L590 875 aa14.9□□□□□ -0.02
ZNF548-211ENST00000600927 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.9□□□□□ -0.02
ZNF548-211ENST00000600927 ARXQ96QS3 562 aa14.9□□□□□ -0.02
ZNF548-211ENST00000600927 PPP1R1BQ9UD71 204 aaPredicted RBP14.9□□□□□ -0.02
ZNF548-211ENST00000600927 KDM3BQ7LBC6 1761 aa14.9□□□□□ -0.02
ZNF548-211ENST00000600927 HEG1Q9ULI3 1381 aa14.89□□□□□ -0.03
ZNF548-211ENST00000600927 SENP3-EIF4A1A0A087X0R7 540 aa14.89□□□□□ -0.03
ZNF548-211ENST00000600927 PHF14O94880 888 aa14.89□□□□□ -0.03
ZNF548-211ENST00000600927 CYP19A1P11511 503 aaPredicted RBP14.89□□□□□ -0.03
ZNF548-211ENST00000600927 RRP1P56182 461 aaKnown RBP14.89□□□□□ -0.03
ZNF548-211ENST00000600927 INTS5Q6P9B9 1019 aaKnown RBP14.89□□□□□ -0.03
ZNF548-211ENST00000600927 DNAJC10Q8IXB1 793 aa14.89□□□□□ -0.03
ZNF548-211ENST00000600927 ZNF496Q96IT1 587 aaPredicted RBP14.89□□□□□ -0.03
ZNF548-211ENST00000600927 RRP7AQ9Y3A4 280 aaKnown RBP14.89□□□□□ -0.03
ZNF548-211ENST00000600927 RTCBQ9Y3I0 505 aaKnown RBP14.89□□□□□ -0.03
ZNF548-211ENST00000600927 DCTN1Q14203 1278 aa14.88□□□□□ -0.03
ZNF548-211ENST00000600927 TTC5Q8N0Z6 440 aa14.88□□□□□ -0.03
ZNF548-211ENST00000600927 RTF1Q92541 710 aaKnown RBP14.88□□□□□ -0.03
ZNF548-211ENST00000600927 ZNF428Q96B54 188 aa14.88□□□□□ -0.03
ZNF548-211ENST00000600927 FHDC1Q9C0D6 1143 aaPredicted RBP14.88□□□□□ -0.03
ZNF548-211ENST00000600927 SPINK5Q9NQ38 1064 aaPredicted RBP14.88□□□□□ -0.03
ZNF548-211ENST00000600927 POLD1P28340 1107 aa14.87□□□□□ -0.03
ZNF548-211ENST00000600927 MSL1Q68DK7 614 aa14.87□□□□□ -0.03
ZNF548-211ENST00000600927 PPP4R2Q9NY27 417 aa14.87□□□□□ -0.03
ZNF548-211ENST00000600927 SOS1Q07889 1333 aaPredicted RBP14.87□□□□□ -0.03
ZNF548-211ENST00000600927 UTRNP46939 3433 aa14.86□□□□□ -0.03
ZNF548-211ENST00000600927 BTBD11A6QL63 1104 aa14.86□□□□□ -0.03
ZNF548-211ENST00000600927 MSH5O43196 834 aa14.86□□□□□ -0.03
ZNF548-211ENST00000600927 KCNQ3O43525 872 aa14.86□□□□□ -0.03
ZNF548-211ENST00000600927 ARHGEF1Q92888 912 aaKnown RBP14.86□□□□□ -0.03
ZNF548-211ENST00000600927 SYT17Q9BSW7 474 aa14.86□□□□□ -0.03
ZNF548-211ENST00000600927 CCDC87Q9NVE4 849 aa14.86□□□□□ -0.03
ZNF548-211ENST00000600927 GNAI1P63096 354 aa14.85□□□□□ -0.03
ZNF548-211ENST00000600927 TRAPPC3LQ5T215 181 aa14.85□□□□□ -0.03
ZNF548-211ENST00000600927 FMNL2Q96PY5 1086 aa14.85□□□□□ -0.03
ZNF548-211ENST00000600927 IFT57Q9NWB7 429 aa14.85□□□□□ -0.03
ZNF548-211ENST00000600927 ZBTB1Q9Y2K1 713 aa14.85□□□□□ -0.03
ZNF548-211ENST00000600927 LAMB4A4D0S4 1761 aa14.84□□□□□ -0.03
ZNF548-211ENST00000600927 GYS1P13807 737 aa14.84□□□□□ -0.03
ZNF548-211ENST00000600927 USP42Q9H9J4 1324 aaKnown RBP14.84□□□□□ -0.03
ZNF548-211ENST00000600927 COL15A1P39059 1388 aa14.84□□□□□ -0.03
ZNF548-211ENST00000600927 ZNF853P0CG23 659 aa14.83□□□□□ -0.04
ZNF548-211ENST00000600927 TAF7Q15545 349 aaPredicted RBP14.83□□□□□ -0.04
ZNF548-211ENST00000600927 PELP1Q8IZL8 1130 aaKnown RBP14.83□□□□□ -0.04
ZNF548-211ENST00000600927 TEX13AQ9BXU3 409 aaPredicted RBP14.83□□□□□ -0.04
ZNF548-211ENST00000600927 SCN7AQ01118 1682 aa14.83□□□□□ -0.04
ZNF548-211ENST00000600927 KIF13BQ9NQT8 1826 aa14.82□□□□□ -0.04
ZNF548-211ENST00000600927 GOLGB1Q14789 3259 aaKnown RBP14.82□□□□□ -0.04
ZNF548-211ENST00000600927 CFAP44Q96MT7 982 aa14.82□□□□□ -0.04
ZNF548-211ENST00000600927 THUMPD2Q9BTF0 503 aaKnown RBP14.82□□□□□ -0.04
ZNF548-211ENST00000600927 STARD3NLO95772 234 aa14.81□□□□□ -0.04
ZNF548-211ENST00000600927 EIF5P55010 431 aaKnown RBP14.81□□□□□ -0.04
ZNF548-211ENST00000600927 BABAM1Q9NWV8 329 aa14.81□□□□□ -0.04
ZNF548-211ENST00000600927 KIAA1551Q9HCM1 1747 aa14.8□□□□□ -0.04
ZNF548-211ENST00000600927 RFC4P35249 363 aa14.8□□□□□ -0.04
ZNF548-211ENST00000600927 BRPF1P55201 1214 aaPredicted RBP14.8□□□□□ -0.04
ZNF548-211ENST00000600927 PDE3AQ14432 1141 aa14.8□□□□□ -0.04
ZNF548-211ENST00000600927 NLGN1Q8N2Q7 840 aa14.8□□□□□ -0.04
ZNF548-211ENST00000600927 FANCIQ9NVI1 1328 aa14.8□□□□□ -0.04
ZNF548-211ENST00000600927 C10orf71Q711Q0 1435 aa14.8□□□□□ -0.04
ZNF548-211ENST00000600927 PRAMEF22A3QJZ6 481 aa14.79□□□□□ -0.04
ZNF548-211ENST00000600927 MMP10P09238 476 aa14.79□□□□□ -0.04
ZNF548-211ENST00000600927 SNRPA1P09661 255 aaKnown RBP14.79□□□□□ -0.04
ZNF548-211ENST00000600927 RARSP54136 660 aaKnown RBP14.79□□□□□ -0.04
ZNF548-211ENST00000600927 AAMPQ13685 434 aa14.79□□□□□ -0.04
ZNF548-211ENST00000600927 BCORQ6W2J9 1755 aa14.79□□□□□ -0.04
ZNF548-211ENST00000600927 NLGN2Q8NFZ4 835 aa14.79□□□□□ -0.04
ZNF548-211ENST00000600927 SRP68Q9UHB9 627 aaKnown RBP14.79□□□□□ -0.04
ZNF548-211ENST00000600927 CD2APQ9Y5K6 639 aa14.79□□□□□ -0.04
ZNF548-211ENST00000600927 NRXN2Q9P2S2 1712 aa14.78□□□□□ -0.04
ZNF548-211ENST00000600927 MS4A1P11836 297 aa14.78□□□□□ -0.04
ZNF548-211ENST00000600927 IL6STP40189 918 aaPredicted RBP14.78□□□□□ -0.04
ZNF548-211ENST00000600927 EIF4A1P60842 406 aaKnown RBP14.78□□□□□ -0.04
ZNF548-211ENST00000600927 ALDH1L2Q3SY69 923 aa14.78□□□□□ -0.04
ZNF548-211ENST00000600927 MIS18AQ9NYP9 233 aa14.78□□□□□ -0.04
ZNF548-211ENST00000600927 NARFQ9UHQ1 456 aa14.78□□□□□ -0.04
ZNF548-211ENST00000600927 USP16Q9Y5T5 823 aa14.78□□□□□ -0.04
ZNF548-211ENST00000600927 CHL1O00533 1208 aa14.77□□□□□ -0.05
ZNF548-211ENST00000600927 BCL2L12Q9HB09 334 aa14.77□□□□□ -0.05
ZNF548-211ENST00000600927 A1BGP04217 495 aa14.76□□□□□ -0.05
ZNF548-211ENST00000600927 CANXP27824 592 aaKnown RBP14.76□□□□□ -0.05
ZNF548-211ENST00000600927 TM4SF1P30408 202 aa14.76□□□□□ -0.05
ZNF548-211ENST00000600927 DDR1Q08345 913 aa14.76□□□□□ -0.05
ZNF548-211ENST00000600927 USPL1Q5W0Q7 1092 aa14.76□□□□□ -0.05
ZNF548-211ENST00000600927 PXDNLA1KZ92 1463 aa14.76□□□□□ -0.05
ZNF548-211ENST00000600927 A0A087WZG4 1122 aa14.75□□□□□ -0.05
ZNF548-211ENST00000600927 GIGYF1O75420 1035 aaPredicted RBP14.75□□□□□ -0.05
ZNF548-211ENST00000600927 EXOSC9Q06265 439 aaKnown RBP14.75□□□□□ -0.05
ZNF548-211ENST00000600927 NBPF26B4DH59 902 aa14.74□□□□□ -0.05
ZNF548-211ENST00000600927 POLRMTO00411 1230 aaKnown RBP14.74□□□□□ -0.05
ZNF548-211ENST00000600927 ZPR1O75312 459 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms