RNA–Protein interactions for RNA: ENST00000600343.5

NFKB1-212, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 2 BASIC

Gene NFKB1, Length 4,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-212ENST00000600343 NEK4P51957 841 aa11.57□□□□□ -0.56
NFKB1-212ENST00000600343 CCDC144BQ3MJ40 725 aa11.57□□□□□ -0.56
NFKB1-212ENST00000600343 INTS3Q68E01 1043 aaKnown RBP11.57□□□□□ -0.56
NFKB1-212ENST00000600343 LRRC8AQ8IWT6 810 aa11.57□□□□□ -0.56
NFKB1-212ENST00000600343 CCDC144CPQ8IYA2 1237 aa11.57□□□□□ -0.56
NFKB1-212ENST00000600343 TMEM57Q8N5G2 664 aa11.57□□□□□ -0.56
NFKB1-212ENST00000600343 ZNF513Q8N8E2 541 aaPredicted RBP11.57□□□□□ -0.56
NFKB1-212ENST00000600343 MAGI2Q86UL8 1455 aa11.57□□□□□ -0.56
NFKB1-212ENST00000600343 NEMFO60524 1076 aa11.57□□□□□ -0.56
NFKB1-212ENST00000600343 IRX1P78414 480 aaPredicted RBP11.57□□□□□ -0.56
NFKB1-212ENST00000600343 NOL8Q76FK4 1167 aaKnown RBP11.57□□□□□ -0.56
NFKB1-212ENST00000600343 PLA2G4DQ86XP0 818 aa11.57□□□□□ -0.56
NFKB1-212ENST00000600343 GCC1Q96CN9 775 aa11.57□□□□□ -0.56
NFKB1-212ENST00000600343 RPS6KA5O75582 802 aa11.57□□□□□ -0.56
NFKB1-212ENST00000600343 ATF7IPQ6VMQ6 1270 aa11.57□□□□□ -0.56
NFKB1-212ENST00000600343 FAXDC2Q96IV6 333 aa11.57□□□□□ -0.56
NFKB1-212ENST00000600343 SETQ01105 290 aaPredicted RBP11.56□□□□□ -0.56
NFKB1-212ENST00000600343 SNW1Q13573 536 aaKnown RBP11.56□□□□□ -0.56
NFKB1-212ENST00000600343 WDR63Q8IWG1 891 aa11.56□□□□□ -0.56
NFKB1-212ENST00000600343 CCAR2Q8N163 923 aaKnown RBP11.56□□□□□ -0.56
NFKB1-212ENST00000600343 TACO1Q9BSH4 297 aaKnown RBP11.56□□□□□ -0.56
NFKB1-212ENST00000600343 SRRTQ9BXP5 876 aaKnown RBP11.56□□□□□ -0.56
NFKB1-212ENST00000600343 VPS18Q9P253 973 aa11.56□□□□□ -0.56
NFKB1-212ENST00000600343 FIBPO43427 364 aa11.56□□□□□ -0.56
NFKB1-212ENST00000600343 C21orf2O43822 256 aa11.56□□□□□ -0.56
NFKB1-212ENST00000600343 ERLIN2O94905 339 aa11.56□□□□□ -0.56
NFKB1-212ENST00000600343 GSPT1P15170 499 aaKnown RBP11.56□□□□□ -0.56
NFKB1-212ENST00000600343 INHBEP58166 350 aa11.56□□□□□ -0.56
NFKB1-212ENST00000600343 CASC1Q6TDU7 716 aa11.56□□□□□ -0.56
NFKB1-212ENST00000600343 NBPF3Q9H094 633 aa11.56□□□□□ -0.56
NFKB1-212ENST00000600343 GNL3LQ9NVN8 582 aaKnown RBP11.56□□□□□ -0.56
NFKB1-212ENST00000600343 HNRNPH1P31943 449 aaKnown RBP11.55□□□□□ -0.56
NFKB1-212ENST00000600343 MCM2P49736 904 aa11.55□□□□□ -0.56
NFKB1-212ENST00000600343 SRCIN1Q9C0H9 1055 aa11.55□□□□□ -0.56
NFKB1-212ENST00000600343 CC2D1AQ6P1N0 951 aaPredicted RBP11.55□□□□□ -0.56
NFKB1-212ENST00000600343 ERC1Q8IUD2 1116 aa11.55□□□□□ -0.56
NFKB1-212ENST00000600343 JAKMIP3Q5VZ66 844 aa11.55□□□□□ -0.56
NFKB1-212ENST00000600343 CUL4AQ13619 759 aa11.54□□□□□ -0.56
NFKB1-212ENST00000600343 ARID5BQ14865 1188 aa11.54□□□□□ -0.56
NFKB1-212ENST00000600343 CCDC93Q567U6 631 aa11.54□□□□□ -0.56
NFKB1-212ENST00000600343 ZC3H12AQ5D1E8 599 aaKnown RBP11.54□□□□□ -0.56
NFKB1-212ENST00000600343 FMNL3Q8IVF7 1028 aa11.54□□□□□ -0.56
NFKB1-212ENST00000600343 INTS4Q96HW7 963 aaKnown RBP11.54□□□□□ -0.56
NFKB1-212ENST00000600343 MAGI3Q5TCQ9 1506 aa11.54□□□□□ -0.56
NFKB1-212ENST00000600343 GRIN2BQ13224 1484 aa11.54□□□□□ -0.56
NFKB1-212ENST00000600343 ABCC5O15440 1437 aa11.54□□□□□ -0.56
NFKB1-212ENST00000600343 ERCC3P19447 782 aa11.54□□□□□ -0.56
NFKB1-212ENST00000600343 ELF1P32519 619 aa11.54□□□□□ -0.56
NFKB1-212ENST00000600343 PLEKHO1Q53GL0 409 aaPredicted RBP11.54□□□□□ -0.56
NFKB1-212ENST00000600343 JPH2Q9BR39 696 aaPredicted RBP11.54□□□□□ -0.56
NFKB1-212ENST00000600343 ARFGAP3Q9NP61 516 aa11.54□□□□□ -0.56
NFKB1-212ENST00000600343 AATKQ6ZMQ8 1374 aa11.54□□□□□ -0.56
NFKB1-212ENST00000600343 H3BQF6 201 aa11.54□□□□□ -0.56
NFKB1-212ENST00000600343 PAX7P23759 505 aa11.54□□□□□ -0.56
NFKB1-212ENST00000600343 EIF5P55010 431 aaKnown RBP11.54□□□□□ -0.56
NFKB1-212ENST00000600343 TYRO3Q06418 890 aa11.54□□□□□ -0.56
NFKB1-212ENST00000600343 CCDC158Q5M9N0 1113 aa11.54□□□□□ -0.56
NFKB1-212ENST00000600343 CBX8Q9HC52 389 aa11.54□□□□□ -0.56
NFKB1-212ENST00000600343 SYNMO15061 1565 aa11.53□□□□□ -0.56
NFKB1-212ENST00000600343 MORC1Q86VD1 984 aa11.53□□□□□ -0.56
NFKB1-212ENST00000600343 KAT2BQ92831 832 aa11.53□□□□□ -0.56
NFKB1-212ENST00000600343 TCP11L2Q8N4U5 519 aa11.53□□□□□ -0.56
NFKB1-212ENST00000600343 STAG1Q8WVM7 1258 aa11.53□□□□□ -0.56
NFKB1-212ENST00000600343 FAM210AQ96ND0 272 aa11.53□□□□□ -0.56
NFKB1-212ENST00000600343 FAM107BQ9H098 131 aa11.53□□□□□ -0.56
NFKB1-212ENST00000600343 NOB1Q9ULX3 412 aaKnown RBP11.53□□□□□ -0.56
NFKB1-212ENST00000600343 ASXL1Q8IXJ9 1541 aa11.53□□□□□ -0.56
NFKB1-212ENST00000600343 NEDD9Q14511 834 aa11.53□□□□□ -0.56
NFKB1-212ENST00000600343 AP1ARQ63HQ0 302 aa11.53□□□□□ -0.56
NFKB1-212ENST00000600343 NUCKS1Q9H1E3 243 aaKnown RBP11.53□□□□□ -0.56
NFKB1-212ENST00000600343 VEZTQ9HBM0 779 aa11.53□□□□□ -0.56
NFKB1-212ENST00000600343 IPO7O95373 1038 aaKnown RBP11.52□□□□□ -0.56
NFKB1-212ENST00000600343 RBM5P52756 815 aaKnown RBP eCLIP11.52□□□□□ -0.56
NFKB1-212ENST00000600343 MAP3K11Q16584 847 aa11.52□□□□□ -0.56
NFKB1-212ENST00000600343 CCDC30Q5VVM6 783 aa11.52□□□□□ -0.56
NFKB1-212ENST00000600343 RPAP1Q9BWH6 1393 aaPredicted RBP11.52□□□□□ -0.56
NFKB1-212ENST00000600343 CCDC69A6NI79 296 aa11.52□□□□□ -0.57
NFKB1-212ENST00000600343 CTAGE5O15320 804 aa11.52□□□□□ -0.57
NFKB1-212ENST00000600343 SGSM2O43147 1006 aa11.52□□□□□ -0.57
NFKB1-212ENST00000600343 ANO6Q4KMQ2 910 aa11.52□□□□□ -0.57
NFKB1-212ENST00000600343 CPLX2Q6PUV4 134 aaKnown RBP11.52□□□□□ -0.57
NFKB1-212ENST00000600343 TCHHQ07283 1943 aa11.52□□□□□ -0.57
NFKB1-212ENST00000600343 TEX11Q8IYF3 940 aa11.52□□□□□ -0.57
NFKB1-212ENST00000600343 SYTL4Q96C24 671 aaPredicted RBP11.52□□□□□ -0.57
NFKB1-212ENST00000600343 RUNDC1Q96C34 613 aa11.52□□□□□ -0.57
NFKB1-212ENST00000600343 PSMD1Q99460 953 aa11.52□□□□□ -0.57
NFKB1-212ENST00000600343 PLEKHA4Q9H4M7 779 aa11.52□□□□□ -0.57
NFKB1-212ENST00000600343 IRAK4Q9NWZ3 460 aa11.52□□□□□ -0.57
NFKB1-212ENST00000600343 ATAD2Q6PL18 1390 aa11.52□□□□□ -0.57
NFKB1-212ENST00000600343 LIG3P49916 1009 aa11.51□□□□□ -0.57
NFKB1-212ENST00000600343 N4BP2L2Q92802 583 aaPredicted RBP11.51□□□□□ -0.57
NFKB1-212ENST00000600343 ETAA1Q9NY74 926 aa11.51□□□□□ -0.57
NFKB1-212ENST00000600343 PRAG1Q86YV5 1406 aa11.51□□□□□ -0.57
NFKB1-212ENST00000600343 TRPM1Q7Z4N2 1603 aa11.51□□□□□ -0.57
NFKB1-212ENST00000600343 CDC25BP30305 580 aa11.51□□□□□ -0.57
NFKB1-212ENST00000600343 PRPF38AQ8NAV1 312 aaKnown RBP11.51□□□□□ -0.57
NFKB1-212ENST00000600343 SSH1Q8WYL5 1049 aa11.51□□□□□ -0.57
NFKB1-212ENST00000600343 PAIP2Q9BPZ3 127 aaKnown RBP11.51□□□□□ -0.57
NFKB1-212ENST00000600343 WDR7Q9Y4E6 1490 aa11.51□□□□□ -0.57
NFKB1-212ENST00000600343 REREQ9P2R6 1566 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms