RNA–Protein interactions for RNA: ENST00000599938.5

ZNF558-206, Transcript of zinc finger protein 558, humanhuman

TSL 5

Gene ZNF558, Length 780 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-206ENST00000599938 COL15A1P39059 1388 aa37.17■■■■□ 3.54
ZNF558-206ENST00000599938 UTRNP46939 3433 aa37.17■■■■□ 3.54
ZNF558-206ENST00000599938 SRP68Q9UHB9 627 aaKnown RBP37.17■■■■□ 3.54
ZNF558-206ENST00000599938 GOLGB1Q14789 3259 aaKnown RBP37.17■■■■□ 3.54
ZNF558-206ENST00000599938 TAF7Q15545 349 aaPredicted RBP37.16■■■■□ 3.54
ZNF558-206ENST00000599938 CCDC146Q8IYE0 955 aa37.16■■■■□ 3.54
ZNF558-206ENST00000599938 THUMPD2Q9BTF0 503 aaKnown RBP37.15■■■■□ 3.54
ZNF558-206ENST00000599938 CD2APQ9Y5K6 639 aa37.15■■■■□ 3.54
ZNF558-206ENST00000599938 CANXP27824 592 aaKnown RBP37.14■■■■□ 3.54
ZNF558-206ENST00000599938 KDM3BQ7LBC6 1761 aa37.13■■■■□ 3.53
ZNF558-206ENST00000599938 RIPK4P57078 832 aa37.12■■■■□ 3.53
ZNF558-206ENST00000599938 ZPR1O75312 459 aa37.11■■■■□ 3.53
ZNF558-206ENST00000599938 ADAMTS8Q9UP79 889 aa37.11■■■■□ 3.53
ZNF558-206ENST00000599938 TMPOP42166 694 aaKnown RBP37.1■■■■□ 3.53
ZNF558-206ENST00000599938 PNISRQ8TF01 805 aaKnown RBP37.1■■■■□ 3.53
ZNF558-206ENST00000599938 MIS18AQ9NYP9 233 aa37.1■■■■□ 3.53
ZNF558-206ENST00000599938 FKBP8Q14318 412 aa37.09■■■■□ 3.53
ZNF558-206ENST00000599938 RUNDC1Q96C34 613 aa37.09■■■■□ 3.53
ZNF558-206ENST00000599938 SNRPA1P09661 255 aaKnown RBP37.08■■■■□ 3.53
ZNF558-206ENST00000599938 LMOD3Q0VAK6 560 aa37.08■■■■□ 3.53
ZNF558-206ENST00000599938 USPL1Q5W0Q7 1092 aa37.07■■■■□ 3.52
ZNF558-206ENST00000599938 PELP1Q8IZL8 1130 aaKnown RBP37.07■■■■□ 3.52
ZNF558-206ENST00000599938 RRP7AQ9Y3A4 280 aaKnown RBP37.07■■■■□ 3.52
ZNF558-206ENST00000599938 EIF5P55010 431 aaKnown RBP37.06■■■■□ 3.52
ZNF558-206ENST00000599938 GPR162Q16538 588 aa37.06■■■■□ 3.52
ZNF558-206ENST00000599938 NARFQ9UHQ1 456 aa37.06■■■■□ 3.52
ZNF558-206ENST00000599938 PARP3Q9Y6F1 533 aa37.06■■■■□ 3.52
ZNF558-206ENST00000599938 PRAMEF22A3QJZ6 481 aa37.05■■■■□ 3.52
ZNF558-206ENST00000599938 ZNF330Q9Y3S2 320 aaPredicted RBP37.05■■■■□ 3.52
ZNF558-206ENST00000599938 LAMB4A4D0S4 1761 aa37.04■■■■□ 3.52
ZNF558-206ENST00000599938 A1BGP04217 495 aa37.04■■■■□ 3.52
ZNF558-206ENST00000599938 C10orf71Q711Q0 1435 aa37.03■■■■□ 3.52
ZNF558-206ENST00000599938 NEUROD2Q15784 382 aa37.03■■■■□ 3.52
ZNF558-206ENST00000599938 USP16Q9Y5T5 823 aa37.03■■■■□ 3.52
ZNF558-206ENST00000599938 KIF13BQ9NQT8 1826 aa37.03■■■■□ 3.52
ZNF558-206ENST00000599938 A0A087WZG4 1122 aa37.02■■■■□ 3.52
ZNF558-206ENST00000599938 IL6STP40189 918 aaPredicted RBP37.02■■■■□ 3.52
ZNF558-206ENST00000599938 SCN7AQ01118 1682 aa37.02■■■■□ 3.52
ZNF558-206ENST00000599938 ANP32CO43423 234 aa37.01■■■■□ 3.52
ZNF558-206ENST00000599938 NPM2Q86SE8 214 aaKnown RBP37■■■■□ 3.51
ZNF558-206ENST00000599938 DDR1Q08345 913 aa36.99■■■■□ 3.51
ZNF558-206ENST00000599938 TSPYL4Q9UJ04 414 aa36.98■■■■□ 3.51
ZNF558-206ENST00000599938 PIP4K2AP48426 406 aaPredicted RBP36.96■■■■□ 3.51
ZNF558-206ENST00000599938 EIF4A1P60842 406 aaKnown RBP36.96■■■■□ 3.51
ZNF558-206ENST00000599938 BCL2L12Q9HB09 334 aa36.96■■■■□ 3.51
ZNF558-206ENST00000599938 CCDC184Q52MB2 194 aa36.95■■■■□ 3.51
ZNF558-206ENST00000599938 PXDNLA1KZ92 1463 aa36.94■■■■□ 3.5
ZNF558-206ENST00000599938 KIAA1551Q9HCM1 1747 aa36.94■■■■□ 3.5
ZNF558-206ENST00000599938 YY1P25490 414 aa36.94■■■■□ 3.5
ZNF558-206ENST00000599938 POLRMTO00411 1230 aaKnown RBP36.93■■■■□ 3.5
ZNF558-206ENST00000599938 YBX3P16989 372 aaKnown RBP eCLIP36.93■■■■□ 3.5
ZNF558-206ENST00000599938 TM4SF1P30408 202 aa36.93■■■■□ 3.5
ZNF558-206ENST00000599938 NFIXQ14938 502 aa36.93■■■■□ 3.5
ZNF558-206ENST00000599938 TBC1D2BQ9UPU7 963 aa36.93■■■■□ 3.5
ZNF558-206ENST00000599938 BCORQ6W2J9 1755 aa36.92■■■■□ 3.5
ZNF558-206ENST00000599938 GIGYF1O75420 1035 aaPredicted RBP36.92■■■■□ 3.5
ZNF558-206ENST00000599938 TRIM35Q9UPQ4 493 aa36.92■■■■□ 3.5
ZNF558-206ENST00000599938 CHD4Q14839 1912 aa36.92■■■■□ 3.5
ZNF558-206ENST00000599938 N4BP2Q86UW6 1770 aaPredicted RBP36.91■■■■□ 3.5
ZNF558-206ENST00000599938 BABAM1Q9NWV8 329 aa36.9■■■■□ 3.5
ZNF558-206ENST00000599938 WWC3Q9ULE0 1092 aa36.89■■■■□ 3.5
ZNF558-206ENST00000599938 AFDNP55196 1824 aaKnown RBP36.89■■■■□ 3.5
ZNF558-206ENST00000599938 TGFB2P61812 414 aa36.88■■■■□ 3.49
ZNF558-206ENST00000599938 DZIP3Q86Y13 1208 aaKnown RBP36.88■■■■□ 3.49
ZNF558-206ENST00000599938 NBPF26B4DH59 902 aa36.87■■■■□ 3.49
ZNF558-206ENST00000599938 APAF1O14727 1248 aa36.87■■■■□ 3.49
ZNF558-206ENST00000599938 NBPF10Q6P3W6 841 aaKnown RBP36.87■■■■□ 3.49
ZNF558-206ENST00000599938 NBPF15Q8N660 670 aa36.87■■■■□ 3.49
ZNF558-206ENST00000599938 MRS2Q9HD23 443 aa36.87■■■■□ 3.49
ZNF558-206ENST00000599938 NRXN2Q9P2S2 1712 aa36.87■■■■□ 3.49
ZNF558-206ENST00000599938 GRIN3BO60391 1043 aa36.86■■■■□ 3.49
ZNF558-206ENST00000599938 CAMTA2O94983 1202 aa36.86■■■■□ 3.49
ZNF558-206ENST00000599938 BICDL1Q6ZP65 573 aa36.86■■■■□ 3.49
ZNF558-206ENST00000599938 TBC1D9BQ66K14 1250 aa36.83■■■■□ 3.49
ZNF558-206ENST00000599938 LAS1LQ9Y4W2 734 aaKnown RBP36.83■■■■□ 3.49
ZNF558-206ENST00000599938 A0A0G2JLW4 131 aa36.82■■■■□ 3.48
ZNF558-206ENST00000599938 SERPINB2P05120 415 aa36.81■■■■□ 3.48
ZNF558-206ENST00000599938 DPEP1P16444 411 aa36.81■■■■□ 3.48
ZNF558-206ENST00000599938 CARMIL3Q8ND23 1372 aa36.79■■■■□ 3.48
ZNF558-206ENST00000599938 CHL1O00533 1208 aa36.79■■■■□ 3.48
ZNF558-206ENST00000599938 BRCA1P38398 1863 aaKnown RBP36.79■■■■□ 3.48
ZNF558-206ENST00000599938 ZNF652Q9Y2D9 606 aa36.78■■■■□ 3.48
ZNF558-206ENST00000599938 SETDB2Q96T68 719 aa36.75■■■■□ 3.47
ZNF558-206ENST00000599938 ERBB4Q15303 1308 aa36.75■■■■□ 3.47
ZNF558-206ENST00000599938 NGEFQ8N5V2 710 aa36.74■■■■□ 3.47
ZNF558-206ENST00000599938 MYL6BP14649 208 aa36.73■■■■□ 3.47
ZNF558-206ENST00000599938 CLEC4GQ6UXB4 293 aa36.73■■■■□ 3.47
ZNF558-206ENST00000599938 CFAP44Q96MT7 982 aa36.73■■■■□ 3.47
ZNF558-206ENST00000599938 BCS1LQ9Y276 419 aa36.73■■■■□ 3.47
ZNF558-206ENST00000599938 EIF2S2P20042 333 aaKnown RBP36.72■■■■□ 3.47
ZNF558-206ENST00000599938 CHRNA5P30532 468 aa36.71■■■■□ 3.47
ZNF558-206ENST00000599938 CALD1Q05682 793 aaKnown RBP36.71■■■■□ 3.47
ZNF558-206ENST00000599938 RGL2O15211 777 aa36.7■■■■□ 3.47
ZNF558-206ENST00000599938 KCNA3P22001 575 aa36.7■■■■□ 3.47
ZNF558-206ENST00000599938 KRT24Q2M2I5 525 aa36.7■■■■□ 3.47
ZNF558-206ENST00000599938 KIF6Q6ZMV9 814 aa36.69■■■■□ 3.46
ZNF558-206ENST00000599938 PIM2Q9P1W9 311 aa36.69■■■■□ 3.46
ZNF558-206ENST00000599938 NPHP1O15259 732 aa36.68■■■■□ 3.46
ZNF558-206ENST00000599938 CNBD1Q8NA66 436 aa36.68■■■■□ 3.46
ZNF558-206ENST00000599938 ANKRD31Q8N7Z5 1873 aa36.67■■■■□ 3.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms