RNA–Protein interactions for RNA: ENST00000599808.1

HOMER3-211, Transcript of homer scaffold protein 3, humanhuman

TSL 2

Gene HOMER3, Length 555 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-211ENST00000599808 TIAM2Q8IVF5 1701 aa16.9■□□□□ 0.3
HOMER3-211ENST00000599808 PRELPP51888 382 aa16.89■□□□□ 0.29
HOMER3-211ENST00000599808 ZC3H4Q9UPT8 1303 aaKnown RBP16.89■□□□□ 0.29
HOMER3-211ENST00000599808 NFIXQ14938 502 aa16.88■□□□□ 0.29
HOMER3-211ENST00000599808 CYP19A1P11511 503 aaPredicted RBP16.87■□□□□ 0.29
HOMER3-211ENST00000599808 LMNB1P20700 586 aa16.87■□□□□ 0.29
HOMER3-211ENST00000599808 MORC1Q86VD1 984 aa16.87■□□□□ 0.29
HOMER3-211ENST00000599808 TIMELESSQ9UNS1 1208 aa16.87■□□□□ 0.29
HOMER3-211ENST00000599808 MRC1P22897 1456 aa16.86■□□□□ 0.29
HOMER3-211ENST00000599808 GLTPD2A6NH11 291 aa16.86■□□□□ 0.29
HOMER3-211ENST00000599808 CAPN15O75808 1086 aa16.86■□□□□ 0.29
HOMER3-211ENST00000599808 IL13P35225 146 aa16.86■□□□□ 0.29
HOMER3-211ENST00000599808 AKAP4Q5JQC9 854 aa16.86■□□□□ 0.29
HOMER3-211ENST00000599808 SLC52A2Q9HAB3 445 aa16.86■□□□□ 0.29
HOMER3-211ENST00000599808 LGR6Q9HBX8 967 aa16.86■□□□□ 0.29
HOMER3-211ENST00000599808 NARFQ9UHQ1 456 aa16.86■□□□□ 0.29
HOMER3-211ENST00000599808 COL15A1P39059 1388 aa16.86■□□□□ 0.29
HOMER3-211ENST00000599808 VEGFAP15692 232 aaPredicted RBP16.85■□□□□ 0.29
HOMER3-211ENST00000599808 SLC39A6Q13433 755 aa16.85■□□□□ 0.29
HOMER3-211ENST00000599808 TNS4Q8IZW8 715 aa16.85■□□□□ 0.29
HOMER3-211ENST00000599808 BCL2L12Q9HB09 334 aa16.85■□□□□ 0.29
HOMER3-211ENST00000599808 ZBTB1Q9Y2K1 713 aa16.85■□□□□ 0.29
HOMER3-211ENST00000599808 DICER1Q9UPY3 1922 aaKnown RBP16.84■□□□□ 0.29
HOMER3-211ENST00000599808 SERPINB2P05120 415 aa16.84■□□□□ 0.29
HOMER3-211ENST00000599808 TTLL6Q8N841 843 aa16.84■□□□□ 0.29
HOMER3-211ENST00000599808 UBR2Q8IWV8 1755 aa16.84■□□□□ 0.29
HOMER3-211ENST00000599808 ANKRD31Q8N7Z5 1873 aa16.84■□□□□ 0.29
HOMER3-211ENST00000599808 CARMIL3Q8ND23 1372 aa16.83■□□□□ 0.28
HOMER3-211ENST00000599808 NFKBIEO00221 500 aa16.82■□□□□ 0.28
HOMER3-211ENST00000599808 RNMTO43148 476 aaKnown RBP16.82■□□□□ 0.28
HOMER3-211ENST00000599808 C2CD5Q86YS7 1000 aa16.82■□□□□ 0.28
HOMER3-211ENST00000599808 FER1L6Q2WGJ9 1857 aa16.82■□□□□ 0.28
HOMER3-211ENST00000599808 POTECB2RU33 542 aa16.81■□□□□ 0.28
HOMER3-211ENST00000599808 HSPA5P11021 654 aaKnown RBP16.81■□□□□ 0.28
HOMER3-211ENST00000599808 COL11A2P13942 1736 aaPredicted RBP16.8■□□□□ 0.28
HOMER3-211ENST00000599808 HSPA1AP0DMV8 641 aaKnown RBP16.8■□□□□ 0.28
HOMER3-211ENST00000599808 HSPA1BP0DMV9 641 aaKnown RBP16.8■□□□□ 0.28
HOMER3-211ENST00000599808 EIF4G2P78344 907 aaKnown RBP eCLIP16.8■□□□□ 0.28
HOMER3-211ENST00000599808 H0YIN7 160 aa16.79■□□□□ 0.28
HOMER3-211ENST00000599808 CANXP27824 592 aaKnown RBP16.79■□□□□ 0.28
HOMER3-211ENST00000599808 TRIM26Q12899 539 aaPredicted RBP16.79■□□□□ 0.28
HOMER3-211ENST00000599808 VSIG10Q8N0Z9 540 aa16.79■□□□□ 0.28
HOMER3-211ENST00000599808 CACNA1SQ13698 1873 aa16.79■□□□□ 0.28
HOMER3-211ENST00000599808 HMOX1P09601 288 aa16.78■□□□□ 0.28
HOMER3-211ENST00000599808 BICDL1Q6ZP65 573 aa16.78■□□□□ 0.28
HOMER3-211ENST00000599808 KNSTRNQ9Y448 316 aa16.78■□□□□ 0.28
HOMER3-211ENST00000599808 SCN7AQ01118 1682 aa16.78■□□□□ 0.28
HOMER3-211ENST00000599808 MTHFSDQ2M296 383 aaKnown RBP16.77■□□□□ 0.28
HOMER3-211ENST00000599808 EIF5P55010 431 aaKnown RBP16.76■□□□□ 0.27
HOMER3-211ENST00000599808 DPY19L2Q6NUT2 758 aa16.76■□□□□ 0.27
HOMER3-211ENST00000599808 C21orf2O43822 256 aa16.75■□□□□ 0.27
HOMER3-211ENST00000599808 AMER1Q5JTC6 1135 aaPredicted RBP16.75■□□□□ 0.27
HOMER3-211ENST00000599808 TBC1D9BQ66K14 1250 aa16.75■□□□□ 0.27
HOMER3-211ENST00000599808 ZNF622Q969S3 477 aaKnown RBP eCLIP16.75■□□□□ 0.27
HOMER3-211ENST00000599808 ZNF219Q9P2Y4 722 aaPredicted RBP16.75■□□□□ 0.27
HOMER3-211ENST00000599808 SLX4Q8IY92 1834 aa16.75■□□□□ 0.27
HOMER3-211ENST00000599808 SIPA1L3O60292 1781 aaPredicted RBP16.74■□□□□ 0.27
HOMER3-211ENST00000599808 STARD3NLO95772 234 aa16.74■□□□□ 0.27
HOMER3-211ENST00000599808 ERFEQ4G0M1 354 aa16.74■□□□□ 0.27
HOMER3-211ENST00000599808 CCDC24Q8N4L8 307 aa16.74■□□□□ 0.27
HOMER3-211ENST00000599808 CLSPNQ9HAW4 1339 aa16.73■□□□□ 0.27
HOMER3-211ENST00000599808 A0A087WZG4 1122 aa16.73■□□□□ 0.27
HOMER3-211ENST00000599808 PRR5LQ6MZQ0 368 aa16.73■□□□□ 0.27
HOMER3-211ENST00000599808 TTC5Q8N0Z6 440 aa16.73■□□□□ 0.27
HOMER3-211ENST00000599808 BRIP1Q9BX63 1249 aa16.73■□□□□ 0.27
HOMER3-211ENST00000599808 PDZRN3Q9UPQ7 1066 aa16.73■□□□□ 0.27
HOMER3-211ENST00000599808 ARFGEF2Q9Y6D5 1785 aa16.73■□□□□ 0.27
HOMER3-211ENST00000599808 PDE6BP35913 854 aa16.72■□□□□ 0.27
HOMER3-211ENST00000599808 POTEIP0CG38 1075 aa16.71■□□□□ 0.27
HOMER3-211ENST00000599808 POTEJP0CG39 1038 aa16.71■□□□□ 0.27
HOMER3-211ENST00000599808 ZNF496Q96IT1 587 aaPredicted RBP16.71■□□□□ 0.27
HOMER3-211ENST00000599808 TBC1D2BQ9UPU7 963 aa16.71■□□□□ 0.27
HOMER3-211ENST00000599808 LTBP3Q9NS15 1303 aa16.7■□□□□ 0.26
HOMER3-211ENST00000599808 BCORQ6W2J9 1755 aa16.7■□□□□ 0.26
HOMER3-211ENST00000599808 HEG1Q9ULI3 1381 aa16.7■□□□□ 0.26
HOMER3-211ENST00000599808 CHADLQ6NUI6 762 aa16.7■□□□□ 0.26
HOMER3-211ENST00000599808 CREBZFQ9NS37 354 aa16.7■□□□□ 0.26
HOMER3-211ENST00000599808 MKRN1Q9UHC7 482 aaKnown RBP16.7■□□□□ 0.26
HOMER3-211ENST00000599808 ZNF330Q9Y3S2 320 aaPredicted RBP16.7■□□□□ 0.26
HOMER3-211ENST00000599808 SCN4AP35499 1836 aa16.69■□□□□ 0.26
HOMER3-211ENST00000599808 DIAPH1O60610 1272 aaKnown RBP16.69■□□□□ 0.26
HOMER3-211ENST00000599808 DDNO94850 711 aaPredicted RBP16.69■□□□□ 0.26
HOMER3-211ENST00000599808 ZNF790Q6PG37 636 aa16.69■□□□□ 0.26
HOMER3-211ENST00000599808 TAOK3Q9H2K8 898 aa16.69■□□□□ 0.26
HOMER3-211ENST00000599808 IL6STP40189 918 aaPredicted RBP16.68■□□□□ 0.26
HOMER3-211ENST00000599808 IL17REQ8NFR9 667 aa16.68■□□□□ 0.26
HOMER3-211ENST00000599808 TEX13AQ9BXU3 409 aaPredicted RBP16.68■□□□□ 0.26
HOMER3-211ENST00000599808 PCGF6Q9BYE7 350 aa16.68■□□□□ 0.26
HOMER3-211ENST00000599808 CAMTA2O94983 1202 aa16.67■□□□□ 0.26
HOMER3-211ENST00000599808 SRGNP10124 158 aa16.67■□□□□ 0.26
HOMER3-211ENST00000599808 TEFQ10587 303 aa16.67■□□□□ 0.26
HOMER3-211ENST00000599808 PRPF40BQ6NWY9 871 aaKnown RBP16.67■□□□□ 0.26
HOMER3-211ENST00000599808 CNBD1Q8NA66 436 aa16.67■□□□□ 0.26
HOMER3-211ENST00000599808 CNKSR1Q969H4 720 aa16.67■□□□□ 0.26
HOMER3-211ENST00000599808 A1BGP04217 495 aa16.66■□□□□ 0.26
HOMER3-211ENST00000599808 STYK1Q6J9G0 422 aa16.66■□□□□ 0.26
HOMER3-211ENST00000599808 SETDB2Q96T68 719 aa16.66■□□□□ 0.26
HOMER3-211ENST00000599808 GNAT3A8MTJ3 354 aa16.65■□□□□ 0.26
HOMER3-211ENST00000599808 COL3A1P02461 1466 aaPredicted RBP16.65■□□□□ 0.26
HOMER3-211ENST00000599808 PASKQ96RG2 1323 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms